Sciurus carolinensis (gray squirrel): 124977414
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Entry
124977414 CDS
T08117
Name
(RefSeq) capping protein, Arp2/3 and myosin-I linker protein 3 isoform X1
KO
K20493
leucine-rich repeat-containing protein 16
Organism
ncar
Sciurus carolinensis (gray squirrel)
Brite
KEGG Orthology (KO) [BR:
ncar00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ncar04131
]
124977414
Membrane trafficking [BR:
ncar04131
]
Others
Actin-binding proteins
Nucleation-promoting factors (NPFs)
124977414
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CARMIL_C
Carm_PH
LRR_6
DUF7605
Apolipoprotein
Motif
Other DBs
NCBI-GeneID:
124977414
NCBI-ProteinID:
XP_047396895
LinkDB
All DBs
Position
2:126530951..126547793
Genome browser
AA seq
1376 aa
AA seq
DB search
MAKASVELTRELQDSIRRCLSQGAVLQQHRVKLETKPKKFEDRVLALTSWRLHLFPLKVP
AKVESSFNVLEIRAFNTLSQNQILVETERGMVSMRLPSAESVDQVTRHVSSALSKVCPGP
GCLIRRGNADTPEGPRDTSPNSETSTSTTHSVCGGFSETYAALCDYNGLHCREEVQWDVD
TIYHAEDNREFNLLDFSHLESRDLALMVAALAYNQWFTKLYCKDLRLGSEVLEQVLHTLS
KSGSLEELVLDNAGLKTDFVQKLAGVFGENGSCVLHALTLSHNPIEDKGFLSLSQQLLCF
PTGLTKLCLAKTAISPRGLQALGQTFGANPAFASSLRYLDLSKNPGLLATDEANALYSFL
AQPNALVHLDLSGTDCAVDLLLGALLHGCCSHLTYLNLARNSCSHRKGREAPPAFKQFFS
SAYTLSHVNLSATRLPLEALRALLQGLSLNSHLSDLHLDLSSCELRSAGAQALQEQLGAV
TCVGSLDLSDNGFDSDLLTLVPALGKNKSLKHLFLGKNFNVKAKTLEEILHKLVQLIQEE
DCSLQSLSVADSRLKLRTSILINALGSNTCLAKVDLSGNGMEDIGAKMLSKALQINSSLR
TILWDRNNTSALGFLDIARALESNHTLRFMSFPVSDISQAYRSAPERTEDVWQKIQWCLV
RNNHSQTCPQEQAFRLQQGLVTSSAEQMLQRLCGRVQEEVRALRLCPLEPVQDELLYARD
LIKDAKNSRALFPSLYELGHVLANDGPVRQRLESVASEVSKAVDKELQVILESMVSLTQE
LCPVAMRVAEGHNKMLSNVAERVTVPRNFIRGALLEQAGQDIQNKLDEVKLSVVTYLTNS
IVDEILQELYHSHKSLARHLTQLRTLSDPPGGLGQGQDLSSRSRGRNHDQEETTDDELGT
NIDTMAIKKQKRCRKIRPVSAFISGSPQDMESQLGSLGIPPGWFSGLGGSQPTASGSWEG
LSELPTHGYKLRHQTQGRPRPPRTTPPGPGRPTQVPVPGTRQENGMASRLDEGLEDFFSR
RVMDESSSYPRTLRTVRPGLSETPLPPLQKKRRRGLFHFRRPRSFKGDRGPGSPTAGLLL
PPPPPPPPTQESPPSPDPPSLGNNSSPCWSPEEETSLLPGFGGGRGPSFRRKMGTEGSEP
GEGDPAPGTAQQPRAHGVALPGLGRAKGWSFDGKREGTGPDLDDSTQAWQKRRSSDDAGP
GAWKPPPPPQSTKPSFSAMRRAEATWHIAEESAPNHSCQSPSPASQDGEEEKEGALFPER
MVPARNAKLQDPPLAPRPPKPVAVPRGRRPPQVPGGREETETGNTAPGVNKSRLRLGSQQ
DQEEPEVQGPPDTGRRTAPLKPKRTRRAQSCDKLEPDRRRPPDPSGASGTSEPGTD
NT seq
4131 nt
NT seq
+upstream
nt +downstream
nt
atggccaaggccagcgtggagctcacccgcgagctgcaagacagcatccggaggtgcctg
agccaaggggctgtgctccaacaacatcgtgtgaagctagagacaaaacccaagaagttt
gaggaccgagtgctggccctgacctcctggcgcctccatctattccctcttaaagtccct
gccaaggtggagagctccttcaatgtcctggagatccgtgcctttaacacgctcagtcag
aaccagatcctggtggagacggagcgcggcatggtgagcatgcgactgccatcagctgag
agtgtggaccaggtgacacgacatgtgagctctgccctctccaaggtctgccctggccct
gggtgtttgatccgacgtggaaatgcagacacaccagaggggccccgagacacatccccc
aactctgagacttcaacatctaccacccatagtgtgtgtggtggcttctccgagacctat
gctgccctgtgtgactacaatgggctgcactgccgtgaggaggtgcaatgggatgtggat
actatctaccatgctgaggataaccgcgagttcaatcttctggatttcagccacttagag
agccgagacttggccctaatggtggcagccttggcctacaaccagtggtttaccaaactc
tactgcaaagacctgcggctgggctcagaagttctagaacaggtgctacataccctgagc
aagtccgggagcctggaagaactggtgctggacaatgctggacttaagacggactttgtc
cagaagctggccggggtgtttggggagaacgggagctgtgtgctgcatgccctcactctg
tcccacaaccccatcgaggacaagggtttcctcagtctgagccagcagctactctgcttc
cctactggcctcaccaagctgtgcttggccaagactgccatttccccccgagggctccag
gcactgggccagacatttggggccaacccggccttcgccagctcccttcgatacctggac
ctgagcaagaaccctgggctgcttgccaccgacgaagccaatgctctgtacagtttcctg
gcccaacccaatgccctggtgcacctggacctgtcgggaactgactgcgctgttgacttg
cttctgggtgccctgctccatggctgctgctcccacctcacctacctcaacctggctcgc
aacagctgttcccacaggaagggccgggaggccccaccagccttcaagcagttcttcagc
agcgcctacacactgagccacgtcaacctgtccgcaacaaggctgcccctggaggccctc
agggcactgcttcagggcctctccctcaacagtcacctcagtgatttgcacctggacctc
agcagctgtgagctccgctcagcaggagcccaggccttgcaggagcagctgggggccgtc
acctgtgtggggagcctagatctgtcagacaatgggtttgactcggacctcctgaccctg
gtgcctgcacttggcaagaacaagtccctcaagcacctgttcctgggcaagaacttcaat
gtcaaagccaagaccctggaggagatcctccacaagctggtgcaactgatccaggaagag
gactgttccctgcagtcactctcagtggcagactcccgactgaagcttcgtactagcatc
ctcatcaatgccctgggcagtaacacctgcctggccaaggtggatctaagcggcaatggc
atggaggacatcggggccaagatgctatctaaggccctgcagataaactcctccctcaga
actatcctatgggatcggaacaatacatctgccctgggcttcctggatattgcgagggcc
ctggagagtaaccacacactgcgcttcatgtccttcccggtgagtgacatctcccaagcc
taccgcagtgcccctgagcgcacagaggatgtctggcagaagatccaatggtgtctggtg
aggaacaaccactctcagacatgccctcaggagcaggccttcaggctgcagcagggcctg
gtgaccagcagcgccgagcaaatgctgcagcggctgtgtggacgagttcaggaggaggta
cgggcactgaggctgtgccctttggaacctgtgcaagatgagctgctctatgctcgggac
ctcatcaaggatgccaaaaactcccgggcgctgtttcccagcctctatgagctgggccac
gtgctggccaatgatgggcctgttcggcagaggctagagtcagtagccagtgaggtgtcc
aaggctgtggacaaggagctgcaggtgatcctggaatccatggtcagcctaacgcaggag
ttatgccctgtagccatgcgggtggctgaggggcacaataagatgctgagcaatgtagca
gagcgcgtcactgtgccccggaacttcatccgtggggctctgctggagcaggctggacag
gacattcagaacaagctggatgaggtgaagctctcagtcgtcacctacttgaccaactcc
atagtggacgagatcctgcaggagctgtaccactcccacaagagcctggcccggcacctg
acccagctaaggacactgtcagatccaccaggagggctgggccaagggcaggatctgtcc
tccagaagccgaggccggaaccatgatcaggaggagaccacagatgatgaacttgggacc
aacatcgacaccatggccatcaaaaagcagaaacgctgccgcaagatccggccggtgtct
gccttcatcagtgggagccctcaggacatggaaagccaactggggagcctgggaatcccc
cctggctggttctcaggacttgggggcagccaacccacggctagtggctcctgggaaggt
ctatctgagctgcctactcatggctataaactaaggcatcaaacacaagggaggccccgg
ccccccaggaccaccccaccaggaccaggtcggcccactcaggtaccagtacctgggact
cgtcaggaaaatgggatggccagccgcctagatgaggggcttgaggactttttcagccga
agggtcatggatgaaagttccagctatccccggactctgaggactgttcggccaggcctc
tcagagacaccactgcctccactccagaagaagaggcgcagaggcctgtttcattttcgg
agaccccggagcttcaagggggacagggggccagggtcccccactgctggactcctcctc
cctccacccccacccccacccccaactcaggagagccctcccagcccagatcccccaagc
ctcggcaataactcttctccctgctggagcccagaggaggaaaccagcctcctccctgga
tttggtgggggaagagggccttccttccgtaggaagatgggcaccgaggggtcagagcca
ggggagggggacccagcccctgggacagcacagcagccaagggcccatggtgttgccctt
cctgggttgggaagagccaagggttggagcttcgacgggaaacgagagggcacaggccca
gacctggatgacagcacccaggcttggcagaagaggcgctcttcagatgatgcaggacct
ggagcctggaagccacccccaccaccccaaagcaccaagccaagcttcagtgccatgcgg
cgagcagaggccacatggcacatagctgaggagagtgcccccaaccacagctgccagagc
cccagcccagcctcccaagatggagaggaagaaaaggaaggagccttattcccagagagg
atggttccagccaggaacgccaagctgcaggatccccctttagctcctcggcctcccaag
ccagtagctgtgcccagaggtcgcaggcccccacaggtgccagggggcagggaggagacc
gagactgggaatacagccccaggagtcaacaagtcccggctgaggctgggctcacagcaa
gaccaagaggagcctgaagttcaagggccccctgatacaggccgccggactgcccccctg
aagcccaagaggacacggcgggcacagtcctgtgataaactggagcctgatagaagacgg
ccccctgacccctcaggtgccagtggaaccagtgagccaggaacagactga
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