Sciurus carolinensis (gray squirrel): 124977436
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Entry
124977436 CDS
T08117
Name
(RefSeq) calpain-3 isoform X1
KO
K08573
calpain-3 [EC:
3.4.22.54
]
Organism
ncar
Sciurus carolinensis (gray squirrel)
Pathway
ncar04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
ncar00001
]
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
124977436
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
ncar01002
]
124977436
Enzymes [BR:
ncar01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.22 Cysteine endopeptidases
3.4.22.54 calpain-3
124977436
Peptidases and inhibitors [BR:
ncar01002
]
Cysteine peptidases
Family C2: calpain family
124977436
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Peptidase_C2
Calpain_III
Calpain_u2
EF-hand_1
EF-hand_6
EF-hand_7
EF-hand_8
EF-hand_5
Motif
Other DBs
NCBI-GeneID:
124977436
NCBI-ProteinID:
XP_047396946
EnsemblRapid:
ENSSCRG00010010078
LinkDB
All DBs
Position
2:complement(110133154..110176006)
Genome browser
AA seq
821 aa
AA seq
DB search
MPTVISPTVAPQTGAEPRSPGPVPHPAQGKTTEAGGGHPSGIYSAIISRNFPIIGVKEKT
FEQLHKKCLEKKVLFLDPEFPPDETSLFYSQKFPIQFVWKRPPEICENPRFIIGGANRTD
ICQGDLGDCWFLAAIACLTLNERLLFRVIPHDQSFTENYAGIFHFQFWRYGDWVDVVVDD
CLPTYNNQLVFTKSNHRNEFWSALLEKAYAKLHGSYEALKGGNTTEAMEDFTGGVTEFFE
IKDAPRDMYKIMRKAIERGSLMGCSIDDGTNMTYGTSPSGLNMGELIARMVRNMDNSLLR
DSDLDPRGSDDRPTRTIVPVQYETRMACGLVKGHAYSVTGLEEALFKGEKVKLVRLRNPW
GQVEWNGSWSDGWKDWSFVDKDEKARLQHQVTEDGEFWMSYEDFIYHFTKLEICNLTADA
LESDKLQTWTVSVNEGRWVRGCSAGGCRNFPDTFWTNPQYRLKLLEEDDDPDDSEVICSF
LVALMQKNRRKDRKLGANLFTIGFAIYEVPKEMHGNKQHLQKDFFLYNASKARSKTYINM
REVSQRFRLPPSEYVIVPSTYEPHQEGEFILRVFSEKRNLSEEVENTISVDRPVKKKKTK
PIIFVSDRANSNKELGVDQESEEGKDKTSPDKQEKSPQPRPGNTDHESEEQQQFRSIFKQ
IAGDDMEICADELKNVLNTVVNKHKDLKTQGFTLESCRSMIALMDTDGSGRLNLQEFHHL
WKKIKAWQKIFKHYDTDQSGTINSYEMRNAVNDAGFHLNSQLYDIITMRYADKHMNIDFD
SFICCFVRLEGMFRAFNAFDKDGDGIIKLNVLEWLQLTMYA
NT seq
2466 nt
NT seq
+upstream
nt +downstream
nt
atgccgactgtcattagtccaactgtggccccacagacaggggccgagcccaggtcccca
gggccagttccccacccggcccagggcaagaccacagaggctgggggtggacacccaagt
ggtatctattcagccatcatcagccgcaattttcctattattggagtgaaagagaagaca
tttgagcagcttcacaagaaatgcctagagaagaaagttctttttctggatcctgagttc
ccaccagatgagacctctctcttctatagccagaagttccccatccagttcgtctggaag
agacctccggaaatttgtgagaatcccagatttatcattggtggagccaataggactgac
atctgtcaaggagatctaggggactgctggtttcttgcagccattgcctgcctgaccctg
aatgaacggctcctttttcgagttataccccatgatcaaagtttcacagaaaactacgca
ggaatcttccacttccagttctggcgctatggagactgggtggatgtggttgttgatgac
tgtctgccaacatacaacaatcaactggttttcaccaaatccaaccaccgcaacgagttc
tggagtgctctgctggagaaggcatatgctaagctgcatggttcctatgaagccctgaaa
ggtgggaacaccacagaggccatggaggacttcacaggaggggtgacagagttttttgag
atcaaggatgctcccagagacatgtacaagattatgaggaaagccattgagagaggttcc
ctcatgggctgctccattgacgatggcacgaacatgacctatggaacctctccttctggt
ctgaacatgggggagttgattgcacggatggtgaggaatatggataactcgctgctcagg
gactcagacctcgaccccagaggctcagatgacagacctacacggacaattgttcctgtt
cagtatgagacaagaatggcctgcgggctggtcaaaggtcatgcctactccgtcactggg
ctggaggaggccttgttcaaaggtgagaaagtgaagctggtgcgactgcggaatccctgg
ggccaggtagagtggaatggctcttggagtgatggttggaaggattggagctttgtggac
aaagatgagaaggcccgtctgcagcaccaggtcactgaggatggagaattttggatgtca
tatgaggatttcatctaccattttacaaagctggagatttgcaacctcacagctgatgct
ctggagtctgacaagcttcagacctggacagtgtctgtgaatgagggccgctgggtgagg
ggctgctctgctggaggctgccgcaacttcccagacactttctggaccaacccacagtac
cgcctgaagctccttgaggaggatgatgaccctgatgactctgaggtgatctgcagcttc
ctggtggccttgatgcagaagaaccggcggaaggaccgaaaactgggggccaacctcttc
actatcggcttcgccatctacgaggttcctaaagagatgcacgggaacaagcagcacctg
cagaaggacttcttcctctataacgcctccaaggccaggagcaaaacctacattaacatg
cgggaggtgtctcagcgtttccgcctgcctcccagcgagtatgtcattgtgccctccacc
tatgagccccatcaggagggggaattcatcctccgggtcttctctgaaaagcggaacctc
tctgaggaagttgaaaatacaatctccgtggatcggccagtgaaaaagaaaaaaaccaag
cccatcatcttcgtttcagacagagcaaacagcaacaaggagctgggtgtggaccaggag
tcagaggagggcaaagacaaaacaagccctgataagcaagaaaaatccccacagccacgg
cctggcaacacagaccacgaaagtgaggaacagcagcaatttcgcagcattttcaagcag
atagctggtgacgacatggagatctgtgcagatgagctcaagaatgtccttaatacagtt
gtgaacaagcacaaggatctgaagacacaagggttcacgctggagtcttgccgtagcatg
attgctctcatggatacagatggatctggaaggttgaacctgcaagagttccatcatctc
tggaagaagatcaaggcctggcagaaaatcttcaaacactatgacacagaccaatctggc
accatcaatagctatgagatgagaaatgctgtcaatgacgcaggattccacctcaatagc
caactctatgacatcattaccatgcggtacgcagacaaacacatgaacattgactttgac
agtttcatctgctgtttcgtcaggctggagggcatgttcagagcttttaatgcatttgac
aaggatggagatggtatcatcaaactcaatgttctagagtggctacagctcaccatgtat
gcttga
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