Sciurus carolinensis (gray squirrel): 124977498
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Entry
124977498 CDS
T08117
Name
(RefSeq) LOW QUALITY PROTEIN: AP-4 complex subunit epsilon-1-like
KO
K12400
AP-4 complex subunit epsilon-1
Organism
ncar
Sciurus carolinensis (gray squirrel)
Pathway
ncar04142
Lysosome
Brite
KEGG Orthology (KO) [BR:
ncar00001
]
09140 Cellular Processes
09141 Transport and catabolism
04142 Lysosome
124977498
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ncar04131
]
124977498
Membrane trafficking [BR:
ncar04131
]
Endosome - Golgi transport
Others
AP-4 complex
124977498
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Adaptin_N
AP4E_app_platf
Coatomer_b_Cpla
Cnd1
INTS1_R4
NNH3
Motif
Other DBs
NCBI-GeneID:
124977498
NCBI-ProteinID:
XP_047397032
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All DBs
Position
2:complement(102694557..102760168)
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AA seq
1130 aa
AA seq
DB search
MSDIVEKTLTALPGLFLQNQPAGGPAATKASFSSRLGGLVRGITALTSKHEEEKLIQQEL
NSLKATVSAPTTTLKMMKECMVRLIYCEMLGYDASFGYIHAIKLAQQGNLLEKRVGYLAV
SLFLHENHELLLLLVNTVVKDLQSTNLVEVCMALTIVSQIFPREMIPAVLPLIEDKLQHS
KEIIRRKAVLALYKFHLIAPNQVQHIHIKFRKALCDRDVGVMAASLHIYLRMIKENSSGY
KDLTGSFVTILKQVVGGKLPVDFNYHSVPAPWLQIQLLRILGLLGKDDQRTSELMYDVLD
ESLRRAELNHNVTYAILFECVHTVYSIYPKSELLEKAAKCIGKFVLSPKINLKYLGLKAL
TYVIQQDPTLALQHQMTIIECLDHPDPIIKRETLELLYRITNAQNVTVIVQKMLEYLHQS
KEEYIIVNLVGKIAELAEKYAPDNAWFIQTMNAVFSVGGDVMHPDIPNNFLRLLAEGFDD
ETEDQQLRLYAVQSYLTLLDMENAFYPQKFLQVMSWVLGEYSYLLEKETPEDVITRLHKL
LMNDSISSETKAWLFAAVTKLTPQAHSSNLVERLIQEFTISLDTCMRQHAFELKYLHENV
ELMKELTSNDKSCEEMMVDASLSFLDGFVAEGLSQGAAPYKPHHQRQEEKLSQEKVLNFE
PYGLSFSSSGFTGRQSPAGISLGSDVSGNSAETGLKETNSLKLEGIKKLWGKEGYLPKKE
SKIGDEMETPPVPQENVTVENVDQVITKRDQSQILTQSKEEKEKQLLASSLFVGLGSEGT
INLLGKADTVSHKFRRKSKGKEAKSEETTSAHSSLSKVACEEDDYLNTLQERXEKELEKF
SLSSQLLDSESLTELPXVEKLPDCSQPAPSLFADNNMEIFHPPSSTAASVAKEISLASLL
EETTEYMHSNLMDVCNNEAVSVSSYKIWKDDCLLMVWSVASKSGLELKSANLEIFPAENF
KITEQLGCCLPVMETESTKNFQYSIQLEKPFTEGNISGFISYQMMDTHSVRLEFSINLSL
LDFIRPLKISTEDFGKLWLSFANDVKQNIKTSESQAALPSALKXLQQKLRLHVIDIIGNE
GLLACQLLPSIPCLLHCRVQTDVLALWFRSSCSALPDYLSYQCQKVMEGS
NT seq
3393 nt
NT seq
+upstream
nt +downstream
nt
atgagcgacatagtggagaagacgctgacggcgctgccgggactgttcttgcagaaccag
ccggccggcggacccgcagccaccaaggcgtccttctcctctaggctgggcggcctggtc
cgcggcatcaccgcgctcacgtccaagcacgaagaagagaaattaatccaacaagaactg
aatagtctgaaagcaactgtttctgctcctactacaacacttaaaatgatgaaggaatgt
atggtgagacttatatattgtgaaatgcttggatatgatgcttcatttggctatatacat
gcaatcaaattggctcaacaaggaaacctcttagaaaaaagagtaggttatttggctgtt
tctttatttctacatgaaaaccatgaactgttgcttctccttgtgaatacagttgtaaag
gacttgcagagcactaacctggtagaagtatgtatggcacttactatcgtcagccagatt
ttccctcgagaaatgattccagctgttcttccattaatagaagataaacttcagcattcc
aaggaaattatacgaagaaaagctgttctggcattatacaaattccatctcattgctcct
aatcaagtacaacatatccatattaagtttcggaaagcactttgtgacagagatgttggg
gtcatggctgcttctttgcacatataccttagaatgattaaggagaattcatctggatat
aaagacttgactgggagttttgtaactattttaaagcaagtagttggaggaaagctccca
gtagatttcaattaccacagtgtgccagcaccatggttacaaattcagctattgagaata
ctgggacttctaggaaaagacgatcaaaggacaagtgaattaatgtatgatgttcttgat
gaatccttacgaagagctgagttaaatcacaatgtcacttatgctattctgtttgaatgt
gtgcatacagtctattctatttatcctaagtcagaattacttgagaaggctgccaagtgc
attggaaaatttgttctctcacctaaaataaatcttaaatatttaggactgaaggctctt
acctatgttatccaacaggatcctactctggctcttcaacaccagatgacaataattgaa
tgcttagaccatcctgatcccattattaaaagagagactctggaacttctttacagaatt
acaaatgcacagaatgtaacagttattgtccagaaaatgcttgaatatttacatcagagt
aaagaagagtatatcattgtcaatttggttggcaaaatagctgagctggctgagaaatat
gctcctgataatgcgtggtttattcagacaatgaatgctgtgttttcagtgggaggagat
gtaatgcatcctgatattcccaataactttctgaggctgctagcagaaggttttgatgat
gaaacagaagatcagcaattgaggctctatgcagttcagtcttatcttactttactggat
atggaaaatgcattttatccacagaagtttcttcaggttatgagttgggtgttaggagag
tattcctacctcttagaaaaggaaacaccagaggatgttataaccaggctccacaagtta
cttatgaatgactccatttcttcagaaacaaaagcctggttgtttgctgctgtgaccaag
ttgacaccccaagcacattcttctaatttagttgagaggttaatccaggaatttactatc
tctctggatacttgtatgagacagcatgcatttgaattaaaatatttgcatgagaatgta
gaacttatgaaagagcttacttccaatgataagagttgtgaagaaatgatggtagatgct
tccttatcttttctggatggttttgtggctgaaggactcagtcagggggcagcaccttat
aaacctcaccaccaacgccaggaggaaaaactttctcaggaaaaagttctcaattttgaa
ccatatggactctccttttcctcatctggcttcactggacgacagtctcctgctggcatt
tctcttggttcagatgtatctgggaatagtgctgagacagggctgaaagaaacaaatagc
ttgaagctagaaggtataaaaaaattgtggggaaaagagggctatcttcccaagaaggag
agcaaaattggtgatgaaatggaaactccacctgttcctcaagaaaatgtaactgtggag
aatgtggatcaagttataacaaaaagggatcagtctcaaatccttacacaatctaaagag
gagaaagaaaagcagctgttggcttcatcattatttgttgggctaggatcagaaggtact
atcaatttgctgggaaaagcagacactgtatctcacaagttcagaaggaaatcaaaaggc
aaggaagccaaaagtgaagaaacgaccagtgctcatagttctttatcaaaggtggcctgt
gaagaagatgattatttgaatactttgcaagagaggnaagagaaagaattagagaaattt
tctctcagttctcaacttttggattctgagtctctcacagaactgcccntggttgagaaa
cttccagattgcagccagcctgcaccttctttgtttgctgataacaacatggaaattttt
catcctccttcatctactgcagcttcagttgccaaggaaatctctttagcttctttgttg
gaagaaactactgaatacatgcattcaaatcttatggatgtctgtaataatgaagctgta
tcagtatcttcttacaagatttggaaagatgattgtttgttgatggtttggtcagttgct
agtaagagtggtttggaattgaaaagtgctaacttagaaatttttcctgcagaaaatttc
aagatcactgagcaacttggatgttgtttgcctgtaatggaaacagaaagcaccaaaaac
tttcaatatagtatacagttggaaaaaccttttacagaaggaaatatttctggctttata
agttatcaaatgatggatactcattctgttcggctggaattttccataaacttatcactg
ttagatttcattagaccattaaaaatctcaactgaagactttggcaaactctggttatcc
ttcgcaaatgatgtgaagcaaaatataaaaacatcagaatctcaagctgctctgccttct
gccctaaaantgctgcaacagaaactgagacttcatgttattgacattataggcaatgaa
ggactattggcctgtcaactgctcccatccattccctgcttactgcattgccgagttcaa
actgatgtattagctctgtggttcagatcctcttgctctgctcttccggactatttatcc
tatcagtgtcaaaaggtgatggagggatcctag
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