Sciurus carolinensis (gray squirrel): 124977513
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Entry
124977513 CDS
T08117
Name
(RefSeq) transcription initiation factor IIB
KO
K03124
transcription initiation factor TFIIB
Organism
ncar
Sciurus carolinensis (gray squirrel)
Pathway
ncar03022
Basal transcription factors
ncar05017
Spinocerebellar ataxia
ncar05203
Viral carcinogenesis
Brite
KEGG Orthology (KO) [BR:
ncar00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
124977513
09160 Human Diseases
09161 Cancer: overview
05203 Viral carcinogenesis
124977513
09164 Neurodegenerative disease
05017 Spinocerebellar ataxia
124977513
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ncar03021
]
124977513
Transcription machinery [BR:
ncar03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIB
124977513
Prokaryotic type
Archaeal type
TFB
124977513
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TFIIB
Zn_Ribbon_TF
Cyclin_N
Cyclin_C
BRF2-like_C_cyclin_rpt
Sigma70_r4
RB_B
KIF9
Motif
Other DBs
NCBI-GeneID:
124977513
NCBI-ProteinID:
XP_047397079
LinkDB
All DBs
Position
1:133934838..133963787
Genome browser
AA seq
316 aa
AA seq
DB search
MASTSRLDALPRVTCPNHPDAILVEDYRAGDMICPECGLVVGDRVIDVGSEWRTFSNDKA
TKDPSRVGDSQNPLLSDGDLSTMIGKGTGAASFDEFGNSKYQNRRTMSSSDRAMMNAFKE
ITTMADRINLPRNIVDRTNNLFKQVYEQKSLKGRANDAIASACLYIACRQEGVPRTFKEI
CAVSRISKKEIGRCFKLILKALETSVDLITTGDFMSRFCSNLCLPKQVQMAATHIARKAV
ELDLVPGRSPISVAAAAIYMASQASAEKRTQKEIGDIAGVADVTIRQSYRLIYPRAPDLF
PPDFKFDTPVDKLPQL
NT seq
951 nt
NT seq
+upstream
nt +downstream
nt
atggcgtctaccagccgtttggatgctcttccaagagtcacatgtccaaaccatccagat
gcaattttagtggaagactacagagctggtgatatgatctgtcctgaatgtggtctggtt
gtaggtgaccgggttattgatgtgggatctgagtggagaactttcagcaatgacaaagca
acaaaagatccatctcgagttggagattctcagaatcctcttttgagtgatggagatttg
tctaccatgattggcaagggtacaggagctgcaagttttgatgagtttggcaattctaag
taccagaatcggagaacaatgagtagttctgatcgggcaatgatgaatgcattcaaggaa
attactaccatggcagacagaatcaacctccctcgaaatatagttgatcgaacaaataat
ttattcaagcaagtgtatgaacagaagagccttaagggaagagctaatgatgccatagct
tctgcttgtctgtatattgcctgtagacaagaaggagttcctaggacatttaaagaaata
tgtgctgtatcacggatttctaagaaagaaattggtcgatgttttaaacttattttgaaa
gctttagaaacaagtgtggatttgattacaactggggacttcatgtccaggttctgttcc
aacctttgtcttcctaagcaagttcagatggcagctacacatatagcccgtaaggctgtg
gaattggacttggttcctgggaggagcccaatctctgtggctgcagcagctatttatatg
gcttcacaggcatcagctgagaagaggacccaaaaagaaattggagatattgctggtgtt
gctgatgttacaatcagacagtcctacaggctgatctaccctcgggctccagatctgttt
cctccagatttcaaatttgacaccccagtggacaaactaccacagctataa
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