Sciurus carolinensis (gray squirrel): 124977551
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Entry
124977551 CDS
T08117
Name
(RefSeq) beta-hexosaminidase subunit alpha isoform X1
KO
K12373
hexosaminidase [EC:
3.2.1.52
]
Organism
ncar
Sciurus carolinensis (gray squirrel)
Pathway
ncar00511
Other glycan degradation
ncar00513
Various types of N-glycan biosynthesis
ncar00520
Amino sugar and nucleotide sugar metabolism
ncar00531
Glycosaminoglycan degradation
ncar00600
Sphingolipid metabolism
ncar00603
Glycosphingolipid biosynthesis - globo and isoglobo series
ncar00604
Glycosphingolipid biosynthesis - ganglio series
ncar01100
Metabolic pathways
ncar04142
Lysosome
Module
ncar_M00079
Keratan sulfate degradation
Brite
KEGG Orthology (KO) [BR:
ncar00001
]
09100 Metabolism
09103 Lipid metabolism
00600 Sphingolipid metabolism
124977551
09107 Glycan biosynthesis and metabolism
00520 Amino sugar and nucleotide sugar metabolism
124977551
00513 Various types of N-glycan biosynthesis
124977551
00531 Glycosaminoglycan degradation
124977551
00603 Glycosphingolipid biosynthesis - globo and isoglobo series
124977551
00604 Glycosphingolipid biosynthesis - ganglio series
124977551
00511 Other glycan degradation
124977551
09140 Cellular Processes
09141 Transport and catabolism
04142 Lysosome
124977551
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03110 Chaperones and folding catalysts [BR:
ncar03110
]
124977551
Enzymes [BR:
ncar01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.52 beta-N-acetylhexosaminidase
124977551
Chaperones and folding catalysts [BR:
ncar03110
]
Intramolecular chaperones
Others
124977551
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Glyco_hydro_20
Glycohydro_20b2
Glyco_hydro_20b
TUG-UBL1
Motif
Other DBs
NCBI-GeneID:
124977551
NCBI-ProteinID:
XP_047397119
LinkDB
All DBs
Position
2:83483719..83508787
Genome browser
AA seq
527 aa
AA seq
DB search
MAGPRLWFPLLLAAAFAAWATALWPWPQYIQTSHRHYSLSPYKFQFRYHVRSAAQPGCAV
LDEAFQRYRKVLFGSGPWPSPKLSGKKHKMKKNKLVVSVVTAGCNHFPTLESLENYTLTV
NDKRFLLVSQNVWGALRGLETFSQLVWKSSEGTFFINKTKIEDFPRFPHRGLLLDTSRHY
LPLFSILDTLDVMAYNKFNVFHWHIVDDSSFPYESITFPELTRKGSYNPVTHIYTAQDVK
EVIEYARLRGIRVLVEFDTPGHTLSWGPGIPGLLTPCYSESQPSGTFGPVNPSLNNTYEF
MSSFFLEISSVFPDFYLHLGGDEVDFTCWKSNPDIQAFMKKKGFGDDFKQLESFYIQTLL
DIVSAYGKGYVVWQEVFDNKVKVRPDTIIQVWQEELPVDYMKEMELITKAGFRALLSAPW
YLNRITYGPDWKDFYKVEPLGFKGTPEQKALVIGGEACMWGEYVDSTNLVPRLWPRAGAV
AERLWSKNSLTDVKFAYQRLSHFRCELLRRGVQAQPLNIGYCEQEFE
NT seq
1584 nt
NT seq
+upstream
nt +downstream
nt
atggcaggccccaggctttggtttccgctgctgctggcggcagcgttcgcggcctgggcg
acggccctatggccttggccccagtacatccaaacctcccaccggcactacagcctttcc
ccctacaaattccaatttcggtatcatgtcaggtccgccgcgcagccgggctgcgctgtc
ctggatgaggcctttcaacgctaccgtaaagtgctcttcggttccgggccttggcccagt
cctaaattatcaggaaaaaagcacaaaatgaagaagaacaagttggttgtctctgtggtc
acagcaggatgtaaccattttcccactttggagtcgctggagaactacacactgaccgta
aatgataagcggtttttactcgtctctcagaatgtctggggagctctccgaggcttggag
acttttagccagctggtttggaaatcatctgagggcacattctttatcaacaagacgaag
attgaggacttccctcgcttccctcaccggggtttgctgttggatacttctcgacattac
ctgccactgtttagcatactggacacactggatgtcatggcatacaataaattcaatgtg
ttccactggcatattgtagatgactcttccttcccatatgagagcatcacttttccagag
ctcaccagaaaggggtcctacaaccctgtcacccacatctacacagcacaggatgtgaag
gaggtaattgaatatgctcggcttcggggtatccgtgtgctggtagaatttgacactcct
ggccacactttgtcctggggaccaggtatccctgggttattgactccttgctactctgag
tctcagccctctggcacctttggaccagtgaaccccagtctcaacaatacctatgagttc
atgagctcattcttcctggagatcagctctgtcttcccagatttttatcttcaccttgga
ggagatgaggttgatttcacctgctggaagtccaacccagatatccaagccttcatgaag
aagaagggctttggcgatgacttcaagcaactggagtctttctacatccagacgctgctg
gacatcgtctctgcttatggcaagggctatgtggtgtggcaggaggtgtttgataataaa
gtaaaggttcggccagacactatcatacaggtatggcaagaagagttaccagtagactac
atgaaggagatggaactgatcactaaggctggcttcagggccctgctttctgccccctgg
taccttaaccgtataacctatggccctgactggaaggacttctataaagtggagcccctg
ggctttaaaggtacccctgagcagaaggctctggtgattggtggagaggcctgtatgtgg
ggagagtatgtggacagtacaaacctagtccccaggctctggcccagagcaggggctgtt
gccgagaggctatggagcaagaattcgctgactgatgtgaagtttgcctatcaacgttta
tcacacttccgctgtgaattgctgaggcgaggtgtccaggcccagcccctcaacataggc
tactgtgaacaggagtttgagtag
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