Sciurus carolinensis (gray squirrel): 124977637
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Entry
124977637 CDS
T08117
Name
(RefSeq) LOW QUALITY PROTEIN: sorting nexin-6-like
KO
K17920
sorting nexin-5/6/32
Organism
ncar
Sciurus carolinensis (gray squirrel)
Pathway
ncar04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
ncar00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
124977637
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ncar04131
]
124977637
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
ncar04990
]
124977637
Membrane trafficking [BR:
ncar04131
]
Endocytosis
Macropinocytosis
Sorting nexins
124977637
Domain-containing proteins not elsewhere classified [BR:
ncar04990
]
Phox homology (PX) domain-containing proteins
Sorting nexins
124977637
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PX
Vps5
FAN1_HTH
Motif
Other DBs
NCBI-GeneID:
124977637
NCBI-ProteinID:
XP_047397275
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All DBs
Position
2:complement(136187009..136242636)
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AA seq
418 aa
AA seq
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MMQEGLDDGPDFLSEEDRGGSLGVSPSFTELKAINVDLQSDAALQVDISDALSERDXVKF
TVHTKSSLPNFKQNEFSVVRQHEEFIWLHDSFVENEDYAGYIIPPAPPRPDFDASREKLQ
KLGEGEGSMTKEEFTKMKQELEAEYLAIFKKTVAMHEVFLCRVAAHPILRKDLNFHVFLE
YNQDLSVRGKNKKEKLEDFFKNMVKSADGVIVSGVKDVDDFFEHERTFLLEYHNRVKDAS
AKSDRMTRSHKSAADDYNRIGSSLYTLGTQDSTDICKFFLKVSELFDKTRKIEARVSADE
DLKLSDLLKYYLRESQAAKDLLYRRSRSLVDYENANKALDKARAKNKDVLQAETSQQLCC
QKFEKISESAKQELIDFKTRRVAAFRKNLVELAELELKHAKGNLQLLQNCLAVLNGDT
NT seq
1257 nt
NT seq
+upstream
nt +downstream
nt
atgatgcaggaaggcctggacgacggccccgacttcctctcggaggaagaccgcggaggt
tcccttggtgtctcccccagctttactgagcttaaagcaataaatgtagatcttcaaagt
gatgctgctctgcaggtggacatttctgatgctcttagtgagagggatnaagtaaaattc
actgttcacacaaaaagttcattgccaaattttaaacagaatgagttttctgttgttcga
caacatgaggaatttatctggcttcatgattccttcgttgaaaatgaagactatgcagga
tatattattccaccagcaccaccaagacctgattttgatgcttcaagggaaaaactacaa
aagcttggagaaggagaaggatcaatgacaaaggaagaattcacaaaaatgaaacaggaa
ctggaagctgaatatttggcaatattcaagaagacagttgcaatgcatgaagtgttccta
tgtcgtgtggcagcacatcctattttgagaaaagatctaaatttccatgtcttcttggaa
tataatcaagatttgagtgtgcgaggaaaaaataaaaaagagaaacttgaagatttcttt
aaaaacatggttaaatcggcagatggagtaattgtttcaggagtaaaggacgtagatgat
ttctttgagcatgaacgaacattccttttagaatatcataaccgagttaaggatgcatct
gctaagtctgataggatgacaagatcccacaaaagtgctgcagatgattacaataggatt
ggttcttcattatacactttaggaactcaggattctacagatatatgcaaatttttcctc
aaagtttcagaactgtttgataaaacaagaaaaatagaagcaagagtgtctgctgatgag
gacctcaaactttctgaccttttgaaatattacttaagagaatctcaagcagctaaggat
ctcctttaccgaagatctcgatcactagtggattatgaaaatgctaacaaagcactggat
aaggcaagagcaaaaaataaagatgttctacaggctgaaacgtcccaacaattatgttgt
cagaagtttgaaaaaatatctgaatctgcaaaacaagaacttatagattttaagacaaga
agagttgctgcattcagaaaaaatttagtggaacttgcagaattagaactgaagcatgca
aagggtaacctccagttactgcagaactgcctggcagtgttaaatggagacacataa
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