Sciurus carolinensis (gray squirrel): 124977706
Help
Entry
124977706 CDS
T08117
Name
(RefSeq) LOW QUALITY PROTEIN: ATP-dependent Clp protease ATP-binding subunit clpX-like, mitochondrial
KO
K03544
ATP-dependent Clp protease ATP-binding subunit ClpX
Organism
ncar
Sciurus carolinensis (gray squirrel)
Brite
KEGG Orthology (KO) [BR:
ncar00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03110 Chaperones and folding catalysts [BR:
ncar03110
]
124977706
Chaperones and folding catalysts [BR:
ncar03110
]
Heat shock proteins
HSP100
124977706
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_2
AAA
ClpB_D2-small
AAA_5
Sigma54_activat
Mg_chelatase
AAA_7
AAA_14
AAA_22
Sigma54_activ_2
RuvB_N
AAA_16
IstB_IS21
NACHT
T2SSE
nSTAND3
TsaE
AAA_18
DEAD
ABC_tran
ResIII
TIP49
AAA_24
AAA_25
PduV-EutP
AAA_29
MCM
Zn_ribbon_PaaD
AAA_23
Motif
Other DBs
NCBI-GeneID:
124977706
NCBI-ProteinID:
XP_047397407
LinkDB
All DBs
Position
2:89747362..89782845
Genome browser
AA seq
633 aa
AA seq
DB search
MSSCGACTCGAAAARLITTSLASAQRGISCSRIHIPVLGRFGTFETLILRRAPLRTFSET
PAYFASKDGTNKDGSGDGNKKSVSEGSSKKSGSGNSGKGGNQLRCPKCGDLCTHVETFVS
STRFVKCEKCHHXFVVLSEADSKKSIIKEPESAAEAVKLAFQQKPPPPPKKIYNYLDKYV
VGQSFAKKVLSVAVYNHYKRIYNNIPANLRQQAEVEKQTSLTPRELEIRRREDEYRFTKL
LQIAGISPHGNALGASMQQQVNQQIPQEKTRSEVLDSSHDDIKLEKSNILLLGPTGSGKT
LLAQTLAKCLDVPFAICDCTTLTQAGYVGEDIESVIAKLLQDANYNVEKAQQGIVFLDEV
DKIXSVPGIHQLRDVGGEGVQQGLLKLLEGTIVNVPEKNSRKLRGETVQVDTTNILFVAS
GAFNGLDRIISRRKNEKYLGFGTPSNLGKGRRAAAAADLANRSGESNTHQDIEEKDRLLR
HVEARDLIEFGMIPEFVGRLPVVVPLHSLDEKTLVQILTEPRNAVIPQYQALFSMDKCEL
NVTEDALKAIARLALERKTGARGLRSIMEKLLLEPMFEVPNSDIVCVEVDKEVVEGKKEP
GYIRAPTKESSEEEYDSGVEEEGWPRQADAANS
NT seq
1902 nt
NT seq
+upstream
nt +downstream
nt
atgtccagctgcggcgcttgtacctgcggcgcagctgccgctcggctcatcaccacctcg
ctcgcctccgcgcagagaggtatctcatgtagtcgcattcatataccagttttaggaagg
tttgggaccttcgaaactctgattctgcgcagagctcctcttagaaccttttcagaaaca
ccagcatactttgcctcgaaagatgggacaaataaagatggctctggagatggaaataag
aaatcagtgagtgagggcagcagtaagaaatcaggctctgggaattctgggaaaggtgga
aaccagctgcgctgtcctaaatgtggtgacttgtgcacacatgtagagacctttgtgtca
tccactcgttttgtaaagtgtgaaaaatgccatcacntttttgttgtcctatctgaagca
gactcaaagaaaagcataattaaagaaccggaatcagctgcagaagctgtaaaattggca
ttccaacagaaacctcctcctccccccaagaagatatataactacctcgacaagtatgtt
gttggccagtcgtttgctaagaaggtgctttcagttgctgtgtataatcattataagagg
atatataataatatcccagccaatctgagacagcaagcagaggttgaaaagcagacatca
ttaacacctagagagttagaaataagaagacgggaagatgagtacagatttacaaaattg
cttcagattgctggaattagcccacatggtaatgctttaggagcatcaatgcagcaacag
gtaaatcaacaaatacctcaggaaaaaacgaggagtgaagtattggattcttctcatgat
gatataaaacttgaaaaaagtaatattttgctgcttggaccaactgggtcaggtaaaacc
ctgctggcacaaactttagctaaatgccttgatgtcccttttgctatctgtgattgtaca
actttgactcaggctggatatgttggtgaagatattgaatctgtgattgccaaactgctc
caagatgccaactataatgtagaaaaagcacaacaaggaattgtctttctggatgaagta
gataagattngcagtgtgccaggcattcatcaattacgggatgtaggtggagaaggcgtt
cagcaaggcttattaaaactactagaaggcactatagtcaatgttccagagaagaattcc
cgaaagctacgtggagaaacagtacaagttgatacaacaaatatcctgtttgttgcatct
ggtgcttttaatggtttagacagaatcattagcaggaggaaaaatgaaaagtatcttgga
tttggaacaccatctaatctgggaaaaggcagaagggctgcagctgctgcagatcttgct
aatcgaagtggagaatcaaatactcaccaagacattgaagaaaaagatcggttattacgt
catgtagaagccagagatctcattgaatttggcatgattcctgagtttgtgggacgatta
cctgtggtggttcctttgcatagcctagatgagaaaacacttgtacaaatactaactgag
ccacgtaatgctgttattcctcaataccaagccttattcagcatggataagtgtgaactg
aatgttactgaggatgctttgaaagccatagctagattggcactagaacgaaaaacaggt
gcacgaggccttcggtccataatggaaaaactgttactagagcccatgtttgaagtccct
aattctgatattgtatgtgtggaggttgacaaagaagtagtagaaggaaagaaggaacca
ggatacattcgggccccaacaaaagaatcctctgaagaggagtatgactctggagttgag
gaagaaggatggcctcgccaagcagatgctgcaaacagctaa
DBGET
integrated database retrieval system
