KEGG   Sciurus carolinensis (gray squirrel): 124977717
Entry
124977717         CDS       T08117                                 
Name
(RefSeq) LOW QUALITY PROTEIN: signal recognition particle 54 kDa protein-like
  KO
K03106  signal recognition particle subunit SRP54 [EC:3.6.5.4]
Organism
ncar  Sciurus carolinensis (gray squirrel)
Pathway
ncar03060  Protein export
Brite
KEGG Orthology (KO) [BR:ncar00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03060 Protein export
    124977717
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02044 Secretion system [BR:ncar02044]
    124977717
Enzymes [BR:ncar01000]
 3. Hydrolases
  3.6  Acting on acid anhydrides
   3.6.5  Acting on GTP to facilitate cellular and subcellular movement
    3.6.5.4  signal-recognition-particle GTPase
     124977717
Secretion system [BR:ncar02044]
 Sec (secretion) system
  Prokaryotic Sec-SRP core components
   124977717
  Eukaryotic Sec-SRP protein
   124977717
SSDB
Motif
Pfam: SRP54 SRP_SPB SRP54_N CbiA nSTAND3 AAA_33 ResIII MeaB AAA_22 nSTAND_NTPase5 NPHP3_N AAA_17 cobW APS_kinase MobB AAA_30 DUF2209 AAA_19 SRPRB 6PF2K Zeta_toxin Thymidylate_kin ATP_bind_1 AAA_18 AAA_16 Torsin ArsA_ATPase AAA
Other DBs
NCBI-GeneID: 124977717
NCBI-ProteinID: XP_047397439
LinkDB
Position
2:136531082..136567738
AA seq 504 aa
MVLADLGRKITSALRSLSNATIINEEVLNAMLKEVCTALLEADVNIKLVKQLRENVKSAI
DLEEMASGLNKRKMIQHAVFKELVKLVDPGVKAWTPTKGKQNVIMFVGLQGSGKTTTCSK
LAYYYQRKGWKTCLICADTFRAGAFDQLKQNATKARIPFYGSYTEMDPVIIASEGXEKFK
NENFEIIIXDTSGRHKQEDSLFEEMLQVANAIQPDNIVYXMDASIGQACEAQAXAFKDKV
DVASVIVTKLDGHAKGGGALSAVAATKSPIXFIGTGEHIDDFEPFKTQPFISKLLGMGDI
EGLIDKVNELKLDDNEALIEKLKHGQFTLRDMYEQFQNIMKMGPFSQILGMIPGFGTDFM
SKGNEQESMARLKKLMTIMDSMNDQELDSTDGAKVFSKQPGRIQRVARGSGVSTRDVQEL
LTQYTKFAQMVKKMGGIKGLFKGGDMSKNVSQSQMAKLNQQMAKMMDPRVLHHMGGMAGL
QSMMRQFQQGAAGNMKGMMGFNNM
NT seq 1515 nt   +upstreamnt  +downstreamnt
atggttctagcagaccttggaagaaaaataacatcagcattacgctcattgagcaatgcc
accattatcaatgaagaggtattaaatgctatgctaaaagaagtatgtacagcattatta
gaagcggatgttaatattaaactagtgaagcaactaagagaaaatgttaagtctgctatt
gatcttgaagagatggcatctggtcttaacaaaagaaaaatgattcaacatgctgtcttt
aaagaactcgtgaagcttgtggaccctggagttaaagcatggacacccactaaaggaaaa
cagaatgtgattatgtttgttggattgcaagggagtggtaaaacaacaacatgttcaaag
ttagcatattattaccagaggaaaggttggaagacctgcttgatatgtgcagacacattt
agagcaggggcttttgaccaactaaaacagaatgctactaaagcaagaattccattctat
ggaagttacaccgaaatggatcctgtaatcattgcttctgaaggangtgagaaattcaaa
aatgaaaattttgaaattattattngtgatacaagtggccgccacaaacaagaagactcg
ttgtttgaagaaatgcttcaagttgctaatgcaatacaacctgataatattgtttatntg
atggatgcctccattggtcaggcttgtgaagcccaggctnaggcttttaaagataaagta
gatgtagcctcagtaatagtgacaaaacttgatggtcatgcaaaaggaggtggtgcactc
agtgcagttgctgccacaaaaagtccaattnatttcattggtacaggggaacatatagat
gactttgagccttttaaaacgcagccttttatcagcaaacttctgggtatgggtgacatt
gaaggactgatagataaagtcaacgagttgaagctagatgacaatgaagcactcatagag
aagttgaaacatggtcagtttacgttgcgagacatgtatgaacaattccaaaatatcatg
aaaatgggaccgttcagtcagatcttggggatgatcccgggttttggaacagattttatg
agcaaaggaaatgaacaggagtcaatggcaaggcttaagaaattaatgacaataatggat
agtatgaatgatcaagaattggacagtacagatggtgccaaggtttttagtaagcaacca
ggaagaatccaaagagtagcacggggatcaggcgtgtcaacaagagatgttcaggagctt
ttgacacaatataccaagtttgcacagatggtaaaaaagatgggaggtatcaaaggactt
ttcaaaggaggtgacatgtctaagaatgtgagccaatcacagatggcaaaattgaatcaa
caaatggccaaaatgatggatccaagagttcttcatcacatgggtggcatggcaggactt
cagtcaatgatgaggcagtttcaacagggtgctgctggcaatatgaaaggcatgatggga
ttcaataatatgtaa

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