Sciurus carolinensis (gray squirrel): 124977799
Help
Entry
124977799 CDS
T08117
Name
(RefSeq) alpha-mannosidase 2C1 isoform X1
KO
K01191
alpha-mannosidase [EC:
3.2.1.24
]
Organism
ncar
Sciurus carolinensis (gray squirrel)
Pathway
ncar00511
Other glycan degradation
Brite
KEGG Orthology (KO) [BR:
ncar00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00511 Other glycan degradation
124977799
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ncar04131
]
124977799
Enzymes [BR:
ncar01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.24 alpha-mannosidase
124977799
Membrane trafficking [BR:
ncar04131
]
Autophagy
Cytoplasm to vacuolar targeting (CVT) pathway
Selective cargos
124977799
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Glyco_hydro_38N
Ams1-like_1st
Glyco_hydro_38C
Alpha-mann_mid
Glyco_hydro38C2
Motif
Other DBs
NCBI-GeneID:
124977799
NCBI-ProteinID:
XP_047397600
LinkDB
All DBs
Position
2:81102665..81113867
Genome browser
AA seq
1039 aa
AA seq
DB search
MAAPALKHWRTTLERVEKFVSPLYFTDCNLRGRLFGDSCPVASLSSFLTPERLAYQEAVQ
QDFSPAQVGHSFGPTWWTCWFRVELSIPEAWVGQEVHFCWESDGEGLVWRDGEPVQGLTK
EGEKTSYVLTDKLGEGDPRSLTLYVEVACNGLLGAGKGSMIAAPDLEKTFRLSRAELAVF
HRDVHKLLVDLELLLGIAKGLGEDNQRSFQALYTANQMVNMCDPAQPETYPVAQALASRF
FGQCGGESQHTIHAMGHCHIDTAWLWPFKETVRKCARSWVTAVRLMEQNAEFIFACSQAQ
QLEWVKNRYPGLHARLQEFAYRGQFVPVGGTWVEMDGNLPSGEAMVRQFLQGQNFFLQEF
GKMCSEFWLPDTFGYSAQLPQIMRGCGITRFLTQKLSWNLVNSFPHHSFFWEGLDGSRVL
VHFPPGDSYGMQGSVEEVLKTVTNNRDKGRTNHSAFLFGFGDGGGGPTQTMLDRLKRLGN
TDGLPRVQLSSPGHLFKALESDSGQLCTWVGELFLELHNGTYTTHAQIKKGNRECERILH
DVELLSSLALARSAQFLYPAAQLQHLWRLLLLNQFHDVVTGSCIQLVAEDAISNYEDIRS
HGNTLLSAAAAALCAGEPGPEGLLIVNTLPWKRTEVLSLPKPGGANSLALVTVPSMGYAP
APTPTLLQPLLPQQPVFVVQETDGSVTLDNGIIRARLDPTGRLTSLVLVASGREAIAEGA
LGNQFVLFDDVPLYWDAWDVMDYHLETRKPVLGQPGTLAVGTEGGLRGSAWFLLQISPNS
RLSQEVVLDVGCPYVCFHTEVHWHEAHKFLKVEFPVRVRSPQATYEIQFGHLQRPTHYNT
SWDWARFEVWAHRWMDLSEHGFGLALLNDCKYGASVQGNVLSLSLLRAPKAPDTTADMGR
HEFTYALMPHRGSFQEAGVIPAAYNFNFPLLALPTPGPAPAATWSAFSLSSSAVVLETVK
QAETSSQSRTLVLRLYEAHGSHVDCWLHTSLPVQEAVLCDFLERRDPAGHLPLRDARLKL
TFSPFQVRSLLLVLQPPPN
NT seq
3120 nt
NT seq
+upstream
nt +downstream
nt
atggcggcgccagctctgaagcactggcgcaccacgcttgagcgggtggagaagtttgtg
tcgcctctctacttcactgactgtaacctccggggcaggctcttcggggacagctgcccg
gtagcctcactctccagcttcctgacgccagagaggcttgcttaccaggaggctgtccaa
caggacttcagcccagcgcaggtcggccacagcttcggacccacatggtggacctgctgg
ttcagggtggaactgagcatcccagaggcatgggtgggccaggaagttcacttctgctgg
gaaagtgatggagaaggcctggtctggcgtgatggggaacctgtccagggcttgaccaaa
gagggtgagaaaaccagttatgttctgactgacaagctgggagaaggagacccccgaagc
ctgaccctctatgtggaagtagcctgcaacgggctcctgggggctgggaagggaagcatg
attgcagcccctgaccttgagaagacattccgactgagtcgggctgagctggctgtgttt
catcgggatgtgcacaagctcctggtggatctggagctgctactgggcattgctaagggc
cttggagaggacaaccagcgcagcttccaggccctgtacacagccaaccagatggtgaac
atgtgtgaccctgcccaacccgagacctacccagtggcccaggccctggcctccaggttc
tttggccagtgtggaggtgaaagccaacataccatccatgctatgggacactgccacatt
gatacagcctggctttggcccttcaaggaaactgtacggaagtgtgcccggagctgggtg
acagctgtgcgactcatggaacagaatgctgagttcatctttgcttgctcccaggcacag
cagctggagtgggtaaaaaaccgctaccctggcctacatgcccggctccaggaatttgcc
taccgagggcagtttgtgcctgtggggggcacctgggtggagatggatgggaaccttccc
agtggagaggccatggtgaggcagttcctgcagggccagaacttcttcctgcaggagttt
gggaagatgtgctctgagttctggctgccagacacattcgggtactcagcacagctcccc
cagatcatgcgtggctgtggcatcacacgcttcttgacacagaaactgagctggaacttg
gtgaactccttcccgcaccatagctttttctgggagggactagatggctcccgtgtgctg
gtccacttcccacctggtgactcatatggaatgcagggcagtgtggaggaggtgctgaag
actgtgaccaacaaccgggacaaggggcggaccaaccacagtgccttcctcttcggcttc
ggggatgggggtggtggccccactcagaccatgctggaccgcttgaagcggctaggcaat
actgacgggctgcccagggtgcagctatcttctccggggcatctcttcaaggcactggag
agtgactcagggcagctgtgcacatgggtcggggaactctttctggagctgcacaatggc
acttacaccacacatgcccagatcaagaaggggaaccgggaatgtgaacggatactacat
gatgtggaattgctcagcagcctcgccctggcccgtagtgcccagttcctatacccagca
gcccagcttcagcacctctggaggctcctactcttgaaccagttccatgatgtggtcact
ggaagctgcatccagttggtggcagaggatgccataagcaactatgaagatatccgttct
catggcaataccctgctcagtgctgcagctgcagccctgtgtgctggggagccaggtcct
gagggcctcctcattgtcaacacgctgccctggaagcgcaccgaagtgttgtccttgccc
aagcctggaggggccaacagtctagccctggtgacagtgcctagcatgggctatgctcct
gctcccacccccaccttactgcagcccttgctgccccagcagcctgtgtttgtggtacaa
gagactgatggttccgtgactctggacaacggcatcatccgagcgaggctggatccaact
ggccgtctgacatccctggtcctggtggcctctggcagggaggccattgctgagggtgct
cttgggaaccagttcgtgctatttgatgatgtccccttgtactgggatgcgtgggatgtc
atggactaccacctagagacacggaaacctgtactaggccagccagggaccttggcagtt
ggcactgaaggtggccttcggggcagtgcctggttcctgctacagatcagccccaacagt
cggcttagccaggaggtcgtgctggatgttggctgcccctatgtctgcttccacactgag
gtacactggcatgaggcccacaagtttcttaaggtggaattccctgttcgtgtgagaagt
ccccaggccacctatgagatccagtttgggcacctgcagcggcccacccactacaacaca
tcttgggactgggcccgatttgaggtgtgggcccaccgctggatggatctgtcagagcat
ggctttgggttggctctgctcaatgactgcaagtatggtgcatcagtacaaggcaatgtc
ctcagcctctcactcttgcgggcacctaaggccccagacaccaccgctgacatggggcgc
catgagttcacctacgcattgatgcctcacaggggctccttccaggaagctggtgttatc
cctgctgcctacaacttcaacttccccttgttggcacttccgacaccgggccctgcgcct
gccgccacctggagtgccttttccctatcttcatcggcagttgtgttggagactgtcaag
caggctgagaccagctcccagagccgcacactggtgctgaggctgtatgaagcccatggc
agccatgtggactgctggctgcacacatccttgccagttcaggaagctgtcctctgcgac
ttccttgagaggcgagaccctgctggccacctgccccttcgagatgcccgactgaagctc
actttttctcccttccaagtgaggtccttgttactcgtgcttcagcctccaccaaactga
DBGET
integrated database retrieval system
