Sciurus carolinensis (gray squirrel): 124977906
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Entry
124977906 CDS
T08117
Name
(RefSeq) C-myc promoter-binding protein isoform X1
KO
K20163
DENN domain-containing protein 4
Organism
ncar
Sciurus carolinensis (gray squirrel)
Brite
KEGG Orthology (KO) [BR:
ncar00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ncar04131
]
124977906
Membrane trafficking [BR:
ncar04131
]
Protein recycling
Rab GTPases and associated proteins
Other Rab GTPase associated proteins
124977906
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
DENN
dDENN
uDENN
PPR_2
PPR_long
PPR_3
PPR
Papo_T_antigen
Motif
Other DBs
NCBI-GeneID:
124977906
NCBI-ProteinID:
XP_047397788
LinkDB
All DBs
Position
2:89225330..89340798
Genome browser
AA seq
1916 aa
AA seq
DB search
MIEDKGPRVADYFVVAGLTDVSKPLEEEIHFNDACHKVAKPKEPITDVSVIIKSLGEEVP
RDYVCIDVTPTGLSADLNNGSLVGPQIYLCYRRGRDKPPLTDLGVLYDWKERLKQGCEII
QSTPYGRPANISGSTSSQRIYITYRRASENMTQNTLAVTDICIIIPSKGESPPHTFCKVD
KNLNNSMWGSAVYLCYKKSVAKTNTISYKAGLICRYPQEDYESFSLPESVPLFCLPMGAT
IECWPSNSKYPLPVFSTFVLTGASAEKVYGAAIQFYEPYSEENLTEKQRFLLGLAPLADG
KSDSSKTIHTNKCICLLSHWPFFDAFRKFLTFLYRYSISGPHVLPIEKHISHFMHKVPFP
SPQRPRILVQLSPHDNLILSQPVSSPLPLSGGKFSTLLQNLGPENAVTLLVFAVTEHKIL
IHSLRPSVLTSVTEALVSMIFPFHWPCPYVPLCPLALADVLSAPCPFIVGIDSRYFDLYD
PPPDVSCVDLDTNTISQTGDKKNVAWKILPKKPCKNLMNTLNNLHQQLAKLQQRPRDDGL
MDLTMNDYDFNSGKRLHMIDLEIQEAFLFFMASILKGYRSYLRPITQAPSETATDATSLF
ALQAFLRSRDRSHQKFYNMMTKTQMFIRFIEECSFVSDKDASLAFFDDCVDKVDMDKSGE
VRLIELDESFKSEHTVFVTPPEIPHLPNGEEPPLQYSYNGFPVLKNNLFERPEGFLQTRK
SKLPSKSSSPSSPSPMFRRTKQEIKSAHKIAKRYSSIPQMWSRCLLRHCYGLWFICLPAY
VKVCHSKVRALKTAYDVLKKMHSKKMDPPDEVCYRILMQLCGQYDQPVLAVRVLFEMQKA
GIDPNAITYGYYNKAVLESTWPSRSRSGYFLWTKVRNVILGVAQFKRALKKHAHLSQTTL
SADGSDLDAVSHGSMDSGHGTHTVEQAPFNTGLIKVYATDDRSSTGGQSDLGYNSLTKEE
VRRGDTSTEDIQEEKDKKGSDSSSLSENESAKGSADCLPKLSYQSSSSIVRLSGTSNNSA
DKVSEESTESTPELLLTSSLEDTNETGNIQSGCFRKRHRSDNEPNLEQQMTWGNRNRNLS
GGVLMGLMLNRINQEANTGNIVEKLGADAKILSNVISKSTRPNSLDIGKPSLRSKRDSLE
KESSDDDTPFDGSNCLADKVDSPVIFDLEDLDNETDGSKVGFIATQNPKRIQRMNSSFSV
KPSEKTDVVTGFDPLSLLVAETEQHKEEEEDEDDSKSISTPSARRDLAEEIVMYMNNMSS
PLTSRTPSIDLQRACDDKSTSKKSPTVVKACRRSSLPPNSPRPVRLTKSKSYTKSEERPR
DRLWSSPAFSPTCPFREESQNTLTHSSPSFNLDTLLVPKLDVLRHSMFTAGKGVAEKASK
WYSRFTMYTTSSKDQSSDRTSLSSVGAQDSESTSLTDEDICHEMEGAASSQESSATSGTK
GIDLSRASLESSASLEGSLSKFALPGKSEMTSSLNTSNTNIFQNYAMEVLISSCSRCRTC
DCLVHDEEIMAGWTADDSNLNTTCPFCGNIFLPFLNIEIRDLRRPGRYFLKSSPSTENTH
FPSSFSSQAKQTCISTSTSGLDKSTISVQGNFDINSKSKPQENSCARSIQIPANRSKTAI
SKCPIFPMARSISTYGTLDKEDTGRQKLFPTGSLPATLQGATDSLGLEWHLPSPDPVTVP
YLSPLVVWKELESLLENEGDHAITVADFVDHHPIVFWNLVWYFRRLDLPSNLPGLILSSE
HCNKYSKIPRHCMSEDSKYVLIQMLWDNMKLHQDPGQPLYILWNAHSQNRTLLFETQKYP
MVHLLQKNDNSFNQELLKSMVKSIKMNDVYGPMSQILETLNKCPHFKRQRSLYREILFLS
LVALGRENIDIDAFDKEYKMAYDRLTPSQVKSTHNCDRPPSTGVMECRKTFGEPYL
NT seq
5751 nt
NT seq
+upstream
nt +downstream
nt
atgattgaagacaaaggaccgcgggttgctgattactttgttgtagcaggactaaccgat
gtttcaaaacctcttgaagaagaaattcacttcaatgatgcctgtcataaagtagctaaa
ccaaaagaacctatcacagatgtttcagttatcatcaaatctcttggggaggaagtacca
cgggattatgtatgtattgatgttaccccaacgggattgtcagcagatctcaataatggg
agtcttgtgggtccccagatttacctttgttatagaagaggaagagataaacctccactt
acagacttgggggttttatatgactggaaagaaagattgaaacagggctgtgaaattatt
caaagtactccttatggtcgtcctgcaaatattagcggcagtacctcatcacaaaggatt
tatatcacttatcgaagagcctctgaaaatatgactcagaatacattggctgtcacagac
atatgtattattatacccagtaaaggagaaagtccaccacacacattctgcaaagtcgac
aagaatctcaataatagtatgtggggatctgcagtgtacttatgttataagaaatcagtg
gcaaagactaacactatatcttacaaagctggtctaatttgtagatatcctcaagaagat
tatgagtcattttcactaccagaatctgttcccttgttttgtttaccaatgggtgcaact
attgaatgttggccatcaaatagcaaataccctctccctgtgttttctacgtttgtgtta
actggagcctcagctgaaaaggtttatggtgctgctattcagttttatgaaccatattct
gaggagaatctcacagaaaaacagagatttcttttgggtttagcacccctggcagatgga
aagtctgatagttctaaaacaattcacactaacaaatgcatctgtcttctttctcattgg
cctttttttgatgcattcaggaagtttctgacttttctttatcgttattcaatatctgga
cctcatgtccttccaattgagaagcatatttctcattttatgcataaagttccttttcca
tctcctcagagaccacggattttagttcagttatcaccacatgataatctgattctcagt
cagcctgtttcttctcctcttccactaagtggtggcaagttttcaactctacttcagaat
ctaggccctgaaaatgctgtaacactactggtgtttgcagtaaccgaacataagattctc
atccattccttacgaccttctgtgcttactagtgtgacagaagcattagtgtctatgatt
ttccctttccactggccatgcccatatgttcctctctgcccactggctttagcagatgtc
ttgagtgctccatgtccattcatagtagggattgattcaagatactttgatctctatgat
cctccaccagatgtcagttgtgttgacctagataccaacaccatttctcaaactggtgac
aagaagaatgtagcttggaagattcttccaaagaaaccatgtaaaaatctgatgaataca
ttgaataatttgcaccagcagctggcaaaattgcagcagagaccaagagatgatggacta
atggacttaacaatgaatgactatgattttaattctggaaagagattgcacatgatagat
ttggaaatccaggaggcatttttgtttttcatggcctccattttaaaaggttacagatca
tacttaaggccaataacacaagccccatctgagacagcaacagatgcaacctctcttttt
gccctgcaagctttcttaagaagccgggaccgatcacatcaaaaattctataacatgatg
accaaaacacaaatgtttattcgcttcattgaagaatgttcttttgtcagtgataaagat
gcaagcctggcattttttgatgattgtgtagataaagtcgatatggacaaaagtggtgaa
gtacgacttatagaattggatgaatctttcaaaagtgaacatactgttttcgtgacacca
cctgagatcccacatctacccaatggtgaagaaccccctttacagtacagctataatgga
tttccagttcttaagaacaatttatttgagagacctgaaggatttctacaaacacgaaag
agcaaattgccttcaaaatcaagtagccccagtagcccttctcccatgttcagaagaaca
aaacaggaaattaaatcagcccataaaatcgccaagaggtattcttctatccctcagatg
tggtctcggtgcctactacgtcactgttatggactgtggtttatttgtctcccagcttat
gtgaaagtatgtcattccaaagtcagagctctgaaaacagcgtatgatgtgctaaaaaaa
atgcattcaaagaagatggatcctcctgatgaggtgtgctaccgcattcttatgcagctc
tgtggacagtatgatcagccagtgcttgccgttagagtgctttttgaaatgcagaaagct
ggtattgaccccaatgcaattacttatggttactataataaggctgttttggaaagtacc
tggccttcaagaagtcgtagtggctattttctttggacaaaagtaagaaatgttatttta
ggagtagcacagttcaaaagagctctaaagaaacatgcacacttatcacaaacaaccctc
tcagcagatggcagtgacctggatgctgttagtcatggcagcatggatagtggtcatggg
acacacactgtggagcaggcaccttttaatacgggtttaatcaaagtatatgctactgat
gatagatctagcacaggtggtcagtctgatcttggatataattcattaactaaggaggaa
gttagaagaggggatacatctactgaggacattcaagaagaaaaagataaaaaagggagt
gattctagttctttgtcagagaacgaaagcgcaaaaggaagtgctgattgccttcctaag
ctcagttaccaaagttcttccagtatagtccgcctcagtggtacaagtaacaacagtgct
gataaagtatcggaagaaagcacagaaagcacacctgagctgctcttaacatcatctctt
gaggatacaaatgaaacaggaaacattcaaagtggatgcttcaggaaaagacatagaagt
gacaatgaacctaatttggagcagcagatgacctggggaaatagaaatcgtaatcttagt
ggaggggtactgatgggattaatgctgaatagaattaatcaagaagcaaacactggaaat
atagttgaaaaattaggagctgatgcaaaaattctttcaaatgttatttcaaaaagtaca
agaccaaatagtcttgatattggaaagccatctttaagatcaaaaagggacagtctagaa
aaggaatccagtgatgatgatacacctttcgatggttctaattgtttggcagataaagtg
gattcccctgttatttttgacttagaagatttagacaatgaaacagatggatcaaaagtg
ggattcattgctacccaaaatcccaagaggattcaacgtatgaacagtagcttttcagta
aaaccttctgaaaaaactgatgttgtaacaggatttgatcccctctctcttttggttgct
gagactgaacagcacaaagaagaagaggaggatgaagatgatagcaaaagcatttcaaca
ccatctgctaggcgtgatttagctgaagaaattgtgatgtatatgaataacatgagcagt
cctttgacaagtcggacaccaagcattgatttacagcgggcatgtgatgataaatcaacc
agtaagaaaagtccaacagtggtcaaggcgtgcagaagatctagcctgcctcctaattct
cctaggccagtgagacttaccaaatctaaaagttacacaaaaagtgaggagagaccacga
gatagactctggtcttctccagccttctcacctacttgcccatttagggaagagtctcaa
aatacattaactcattcatcaccttcatttaacttagatacactattggtacctaaacta
gatgttctaagacacagtatgttcactgctggaaaaggagttgcagagaaagcaagcaag
tggtactcaagattcaccatgtataccacgtcctctaaggatcaaagttctgatcgtacc
agtctttcttcagtgggagcccaggattctgaatctacctctttgacagatgaagatatt
tgccatgagatggaaggagctgcttcctcccaagagagcagtgccacttcagggaccaag
ggaattgatctcagtcgagcaagcctggaaagttctgcctccctagaaggctccctgtca
aagtttgccttacccgggaaatcagaaatgacatcttctctgaacacaagtaacacaaat
atcttccagaactatgcaatggaggttctcatctcaagttgttctcgatgtagaacttgc
gattgtcttgtccatgatgaggaaatcatggctggctggacagcagatgattcaaatctc
aatactacatgcccattctgtggcaatattttcttaccctttctgaatattgaaataaga
gatttaagacgacctggaagatactttttgaagtcaagcccttctacagaaaatacccac
tttccatcctccttttcaagtcaggcaaagcagacttgcatttccacatcaacttctggt
cttgacaaatctactatctctgttcaagggaattttgacataaatagcaaatctaaaccg
caggaaaattcctgtgcccgaagtattcagatccctgctaatagatcaaaaacagctata
tcaaaatgtccaatatttccaatggccagaagtattagtacttacggcaccttggataaa
gaagatactggaagacagaaactctttcctacaggcagcctgccagctactttacaagga
gctacagattctttaggattagaatggcaccttccaagtccagatcctgtgactgttcca
tatcttagtccattagtggtatggaaagaacttgagagcttattggaaaatgaaggtgat
catgcaataacagtggcagactttgtggaccatcatccaattgttttttggaacctggtg
tggtattttagacgtcttgacttgcccagtaacttacctggattgattctttcttctgag
cattgtaataagtattcaaagattccccgccactgtatgtctgaagacagtaaatatgtt
ttaatacaaatgttatgggacaatatgaaattacatcaggatccagggcagcctttgtat
atcctctggaatgcccacagtcaaaatcgtactcttttgtttgagacccagaagtatcca
atggttcatttattacaaaaaaatgataactcatttaaccaggagctattgaaaagtatg
gtaaaaagcattaaaatgaatgatgtctatggaccaatgagtcagattttagagacactg
aataagtgtccacattttaaaagacagaggagtttgtacagagaaatactatttctctca
cttgtagcactgggaagagaaaacattgatatagatgcatttgacaaagagtacaagatg
gcatatgatcgtctcacacctagtcaagtcaagagtacacacaactgtgatagaccacca
agtactggagtgatggaatgtcgaaaaacctttggagaaccttatctataa
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integrated database retrieval system
