Sciurus carolinensis (gray squirrel): 124977927
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Entry
124977927 CDS
T08117
Name
(RefSeq) 26S proteasome regulatory subunit 10B
KO
K03064
26S proteasome regulatory subunit T4
Organism
ncar
Sciurus carolinensis (gray squirrel)
Pathway
ncar03050
Proteasome
ncar05010
Alzheimer disease
ncar05012
Parkinson disease
ncar05014
Amyotrophic lateral sclerosis
ncar05016
Huntington disease
ncar05017
Spinocerebellar ataxia
ncar05020
Prion disease
ncar05022
Pathways of neurodegeneration - multiple diseases
ncar05169
Epstein-Barr virus infection
Brite
KEGG Orthology (KO) [BR:
ncar00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03050 Proteasome
124977927
09160 Human Diseases
09172 Infectious disease: viral
05169 Epstein-Barr virus infection
124977927
09164 Neurodegenerative disease
05010 Alzheimer disease
124977927
05012 Parkinson disease
124977927
05014 Amyotrophic lateral sclerosis
124977927
05016 Huntington disease
124977927
05017 Spinocerebellar ataxia
124977927
05020 Prion disease
124977927
05022 Pathways of neurodegeneration - multiple diseases
124977927
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03051 Proteasome [BR:
ncar03051
]
124977927
Proteasome [BR:
ncar03051
]
Eukaryotic proteasome
Regulatory particles
PA700 (19S proteasome)
ATPase subunits
124977927
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA
Prot_ATP_ID_OB_C
AAA_lid_3
AAA_16
AAA_2
AAA_22
AAA_5
RuvB_N
PRS7_OB
nSTAND3
Prot_ATP_ID_OB_N
AAA_14
DUF815
AAA_7
AAA_11
TIP49
AAA_33
RNA_helicase
TPR_MLP1_2
AAA_3
NPHP3_N
Csa3_N
AAA_18
Mg_chelatase
bpMoxR
DUF3829_2nd
AAA_28
DUF5906
AAA_lid_PRS2_C
TsaE
AAA_24
NACHT
ATPase
AAA_25
Occludin_ELL
AAA_17
ATPase_2
Parvo_NS1
IstB_IS21
DUF4140
Med4
Motif
Other DBs
NCBI-GeneID:
124977927
NCBI-ProteinID:
XP_047397825
LinkDB
All DBs
Position
2:153280926..153303105
Genome browser
AA seq
403 aa
AA seq
DB search
MAIPSIPYERRLLIMADPRDKALQDYRKKLLEHKEIDGRLKELREQLKELTKQYEKSEND
LKALQSVGQIVGEVLKQLTEEKFIVKATNGPRYVVGCRRQLDKSKLKPGTRVALDMTTLT
IMRYLPREVDPLVYNMSHEDPGNVSYSEIGGLSEQIRELREVIELPLTNPELFQRVGIIP
PKGCLLYGPPGTGKTLLARAVASQLDCNFLKVVSSSIVDKYIGESARLIREMFNYARDHQ
PCIIFMDEIDAIGGRRFSEGTSADREIQRTLMELLNQMDGFDTLHRVKMIMATNRPDTLD
PALLRPGRLDRKIHIDLPNEQARLDILKIHAGPITKHGEIDYEAIVKLSDGFNGADLRNV
CTEAGMFAIRADHDFVVQEDFMKAVRKVADSKKLESKLDYKPV
NT seq
1212 nt
NT seq
+upstream
nt +downstream
nt
atggccattcccagcatcccctatgagcgacggcttctcatcatggcggaccctagagat
aaggcgcttcaggactaccgcaagaagctgctggagcacaaggagatcgacggccgtctt
aaggagttaagggaacaattaaaagaacttaccaagcagtatgaaaagtctgaaaatgat
ctgaaggccctacaaagtgttgggcagattgtgggtgaagtgcttaaacaactaaccgaa
gaaaaattcattgttaaagctacaaatggaccaagatatgttgtgggttgtcgacgacag
cttgacaaaagtaagctgaagccaggaacaagagttgctttggatatgactacactaact
atcatgagatatttgccaagagaggtggatccccttgtttacaacatgtctcatgaggat
cctgggaatgtttcttattctgagattggaggtctgtcagaacagattcgggaattaaga
gaggtaatagaattacctcttacaaatccagaattattccagcgagtaggaataatacct
ccaaaaggctgtttgttatatggaccaccaggcacaggaaaaacactcttggcacgagct
gttgctagccaactggactgcaatttcttaaaggttgtatctagttctattgtagacaag
tacattggtgaaagtgctcgtttgattagagaaatgtttaattatgccagggatcatcag
ccatgcatcatttttatggatgaaatagatgctattggtggtcgtcggttttctgaaggt
acttcagctgacagagagattcagagaaccttaatggagttactgaatcaaatggatgga
tttgatactctgcatagagttaaaatgatcatggctacaaacagaccagatacgctggac
cctgctttattgcgtccaggaagattagatagaaaaatacatattgatttaccaaatgaa
caagcaagattagatattttgaaaatccatgcaggacccattacaaagcatggtgaaata
gattatgaagcaattgtgaagctatcagatggttttaatggagcagacctgagaaatgtt
tgtactgaagcaggtatgtttgcaattcgtgctgatcatgattttgtagttcaagaagac
ttcatgaaagcagtcagaaaagtggctgattctaagaagctagagtccaaattggactac
aaacctgtgtaa
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