Sciurus carolinensis (gray squirrel): 124977938
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Entry
124977938 CDS
T08117
Name
(RefSeq) junctional adhesion molecule A-like
KO
K06089
junctional adhesion molecule 1
Organism
ncar
Sciurus carolinensis (gray squirrel)
Pathway
ncar04514
Cell adhesion molecule (CAM) interaction
ncar04517
IgSF CAM signaling
ncar04530
Tight junction
ncar04670
Leukocyte transendothelial migration
Brite
KEGG Orthology (KO) [BR:
ncar00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecule (CAM) interaction
124977938
04517 IgSF CAM signaling
124977938
09140 Cellular Processes
09144 Cellular community - eukaryotes
04530 Tight junction
124977938
09150 Organismal Systems
09151 Immune system
04670 Leukocyte transendothelial migration
124977938
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
ncar04515
]
124977938
04090 CD molecules [BR:
ncar04090
]
124977938
Cell adhesion molecules [BR:
ncar04515
]
Immunoglobulin superfamily
CTX family
124977938
CD molecules [BR:
ncar04090
]
Proteins
124977938
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ig_3
ig
I-set
V-set
Ig_2
C1-set
C2-set_2
Ig_6
VEGFR1-3_N_Ig-like
V-set_CD47
Ig_C17orf99
Adeno_E3_CR1
Motif
Other DBs
NCBI-GeneID:
124977938
NCBI-ProteinID:
XP_047397843
LinkDB
All DBs
Position
1:89033095..89054918
Genome browser
AA seq
298 aa
AA seq
DB search
MGMKAKAGRKQLLLFTSAILCPLVLGKGTVHIPEPEVRVPENNPVKLPCSYSGFSSPRVE
WKFVQGDTTSLVCYNSKITASYEDRVTFSPTGITFQSVTRKDNGMYTCMVSEEGGNNYGE
DSIQLVVIVPPSKPTVNIPSSATIGNRAVLTCSEQDGSPPSEYTWFKDGVQMPTDPKNNR
AFINSSYTLNQKSGELVFDPVSGSDTGEYTCQAQNGYGTPMKSEAVRMEAVELNVGGIVA
AVLVTLILLGVLIFGIWFAYTRGYFDRTKKGTSSKKVIYSQPAARSEGEFKQTSSFLV
NT seq
897 nt
NT seq
+upstream
nt +downstream
nt
atggggatgaaggcgaaagccggaagaaaacaattgcttctctttacatcggcgatcctg
tgtcccctggtgctgggcaagggtacagtacacataccagaacctgaagttcgagttcct
gagaataacccggtcaagttgccctgctcctactctggtttctcctctccccgtgtggag
tggaagtttgtccaaggtgacaccaccagtttggtttgctataacagcaagatcacagct
tcctatgaggaccgtgtcaccttctcaccaactggcatcaccttccaatctgtgacccgg
aaagacaatgggatgtatacttgtatggtctctgaggaaggtggcaacaattatggggag
gacagcatccagcttgttgtgattgttcctccatctaagcctacagtcaacattccctcc
tctgctaccatcggaaaccgggcagtgctgacctgctcagaacaagatggttccccgccc
tctgaatatacctggttcaaggatggggtacagatgcctacggatcccaagaacaaccgt
gccttcatcaattcttcctatactctgaatcagaagtcaggggagttggtctttgatcct
gtgtcgggctctgacactggagaatatacttgtcaggcacagaatgggtatgggacaccc
atgaagtcagaagctgtacgcatggaagctgtggagctgaatgtggggggcattgtagca
gctgtccttgtaacactgattctccttggagtcttaatttttggcatctggtttgcctat
actcgaggctactttgacagaacaaagaaagggacttcaagtaagaaggtgatttacagc
cagcctgctgctcgaagtgaaggggaattcaaacagacctcgtcattcctggtgtga
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