Sciurus carolinensis (gray squirrel): 124978036
Help
Entry
124978036 CDS
T08117
Name
(RefSeq) dynein axonemal assembly factor 9 isoform X1
KO
K25424
dynein axonemal assembly factor 9
Organism
ncar
Sciurus carolinensis (gray squirrel)
Brite
KEGG Orthology (KO) [BR:
ncar00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
ncar03037
]
124978036
04812 Cytoskeleton proteins [BR:
ncar04812
]
124978036
Cilium and associated proteins [BR:
ncar03037
]
Motile cilia and associated proteins
Dynein assembly factors
124978036
Cytoskeleton proteins [BR:
ncar04812
]
Eukaryotic cytoskeleton proteins
Microtubules
Tubulin-binding proteins
Dyneins
Dynein-related proteins
124978036
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DAAF9_N
CobW_C_DAAF9
SIR2_2
Motif
Other DBs
NCBI-GeneID:
124978036
NCBI-ProteinID:
XP_047398004
LinkDB
All DBs
Position
2:complement(28702977..28855771)
Genome browser
AA seq
1182 aa
AA seq
DB search
MDVYPVHQLGLPRSRFPGSSGRASPSVSCNRLRQIQSILTQSSKSRPDGILCILGIDSRY
NEGCRELANYLLFGLYNQNTSDFEKTGFSEEVLDDLIILIKSDSVHLYCNPVNYRYLLPY
VAHWRNLHFHCMTENEYEDEEAAEEFKISSFVDMVRDCSRIGIPYSSQGHLQIFDMFVVE
KWPIVQAFALEGIGGDGFFTMKYELQDVSLNLWNVYSKMDPVSLENLLSEDLVAFEHQWT
SFFANFDTEIPFLLELSESQAGEPFRSYFSHGMISSHITENSPNRQPFVLFGNHSTRENL
NAGNFNFPSEGHLVRSTGPGGSFAKHMVAQCVSPKGPLACSRTYFFGATHIPYLGGSDKL
RKNDKLPKKTEQIRLLSQIYAAVIEAVLAGIACYAKASSLTKAKEVAEQTLVSELDSFEL
VQFKTALCSKMAFHIHAVNNQGRIVPLEGEDSLSFMKTASMTVYDIPDLLGGRGCLGSVV
FSESFLTSQILVKEKDGTVITETSYIVLTAAIPRFCSWLVEDDEVKLSEKTQQAVRGDEC
FLGTFLTGGEGAYLYSSNLHSWPEEGNLHFFSSGLLFSHRHHGSIIISKDHMNSLSFYDG
DSTSVVAALFISFRSSLLPHLPVHFHGSSNFLMIALFPKSKIYQAFYSEVFSPWQQQDNS
GLSLKVIQEDGLSVEQKRLHSSAQKLFGALNHPAGEKWSSSKLLSAKLPELDWFLQHFTV
SSISREPVMQIHLPILLQQAEISPPHRVENDKVIISIVTGLPGCHASELCAFLVTLHKEY
GRWMVYRQIMDSSECFHAAHFQKYLSSALEAQQNRSARQSTYIRKKTRLLVVLQGYTDVI
DVVQALQTHPDSNVKSSFTIGAITVCMEPLSCYMEHRFLFPKCLDQCSQGLVNNVVFTSH
TTEQRHPLLVQLQSLIRAANPTTAFILAENGIVTRNEDIELILSENSFSSPQMLRSRYLM
YPGWYEGKFDSGSVFPLMVQICVWFGRPLEKTRFVAKCKAIQSSIKPSPFSGNIYHILGK
VKFSDSERTMEVCHNTLANSLSIMPVLDGPTPPPDSRSTPQDSGQQECYLVFIGCSLKED
NLKDWLRQSAKQKPQRKALKTRGMLTQQEIRNIHVKRHLDPLPAGYFYNGTQFVNFFGDK
TDFHPLMDQFMNDYVEEANREIERYNRELEQQEYHDLFEQKS
NT seq
3549 nt
NT seq
+upstream
nt +downstream
nt
atggacgtataccccgtgcaccagctggggctgccccgctcacggttccccggcagctct
ggccgcgcgtcgccctccgtcagctgtaaccgactccgccagatacagagcatcctgacc
cagagcagcaaatctcggcctgatggaatcctgtgcatcctaggaattgatagcaggtac
aatgaaggctgcagagaactggcaaattatcttctgtttggtttatataatcagaatacc
agtgattttgagaaaacgggattttctgaagaagttcttgatgatttaattatattgatt
aaatcagacagtgtccatctgtactgtaatcctgttaactatcgctatctattaccctat
gtggcgcattggagaaatctgcatttccactgcatgacggaaaatgagtatgaagatgag
gaagctgcagaagaatttaaaatttccagctttgtagacatggtccgagactgtagcaga
attggcattccttacagctcccaaggtcacttgcagatatttgatatgtttgtggtggag
aaatggccaattgtacaggcctttgcacttgagggcattggaggggatggattttttacc
atgaaatatgagttgcaggatgtgagtttgaatctttggaatgtctacagcaagatggat
cctgtgtctctggagaatttgctgtcagaagatttggtggcttttgaacatcagtggact
agcttctttgctaattttgacacagaaattcctttcctgctagaactttcagaatctcag
gctggcgagccattcagaagttacttcagtcatggaatgatatccagccatataactgaa
aatagccctaaccggcagccatttgttctctttggtaatcactccacccgagaaaacctg
aatgctggcaactttaacttcccttctgaagggcatttggtacgcagcactggtcctggt
gggagctttgccaaacacatggtagcacagtgtgtctcaccgaagggacctctcgcatgt
tcaagaacctacttttttggagctactcacattccttacttgggtggcagtgacaagctg
cgaaagaatgacaagctgcccaagaaaactgaacaaattaggctcttgtcccagatatat
gctgctgttattgaggctgttttggctggcattgcatgttatgctaaagcttccagtcta
acaaaggcaaaggaggtagcagagcagactctggtatctgagttagattcctttgagctg
gttcagtttaagacagccctgtgctccaagatggcttttcatatacacgctgtgaataat
cagggaagaattgtgcctctggagggtgaagatagcttatcctttatgaaaacggcaagt
atgactgtctatgacattcctgatttgctgggaggaagagggtgtttaggatctgtggtc
ttctcagaatcatttttgacatctcagatcttggttaaagaaaaggatggcactgttatc
acagagaccagctacatagtcctgacagccgccatacccagattctgctcctggctggta
gaagatgatgaagtaaaattgtctgagaaaacccagcaagctgtgaggggagacgagtgt
ttcctgggcacttttctaacaggaggagaaggagcatatctttattccagcaatttacat
tcctggcccgaggaaggaaacttgcatttcttctctagtggccttctgttttctcaccgt
catcatggaagtatcatcatttccaaggatcacatgaattccctttccttctatgatggg
gactctaccagtgttgtagctgcccttttcatcagcttcagaagctcattgcttcctcac
ctcccagttcatttccatggatcaagcaactttctgatgattgctcttttccccaaatca
aagatatatcaagcattttactcagaggtcttctccccctggcaacagcaggataactca
ggactctctttaaaagtgatccaggaagatggattatctgtggaacaaaagagattacac
tccagcgcacagaaactttttggtgccctgaaccatcctgctggggagaagtggagttct
tcaaaattgctctcagctaaactcccagagctggactggtttcttcagcatttcactgtc
agcagcattagtcgggagcctgtgatgcagatccatcttccgatcctgctgcaacaagct
gaaatcagtcctccgcacagagtagaaaatgacaaggtaattatcagcattgtaactggc
ctcccaggctgtcatgctagtgaactctgtgcttttctggtcactctacataaggaatat
ggcaggtggatggtgtaccgccaaatcatggacagctctgaatgttttcatgctgcccac
ttccagaaatacctttctagtgccctggaggcccaacagaaccgctctgcccgtcagtca
acctacatccgcaagaagaccaggctactggtagtgttacaaggctacacagatgtaatt
gatgtcgtccaggccctgcagacccacccagactcgaatgtcaagtcctccttcaccatt
ggtgccatcacagtgtgcatggagcccctgagctgctacatggagcacaggtttctcttc
cccaagtgtcttgaccagtgttcacaaggcctggtgaataatgtggtgttcaccagtcac
accacggagcagaggcacccccttcttgttcaattgcagagtctcatcagggctgccaat
cctaccacagccttcattcttgcagaaaatggcattgtcaccaggaatgaagacattgag
ctgattctctcagaaaatagtttttcaagtcctcagatgctgcgatcccgatatttaatg
taccctggctggtatgaaggtaaatttgattctggatcagtctttccactgatggttcag
atctgcgtatggtttggccgtcccttggagaagactcgctttgtggccaagtgtaaagca
attcaatcctccatcaagccaagtcctttctctggaaacatctaccacatcctgggcaaa
gtgaagttttcagactctgaaaggaccatggaggtctgccacaacactctggccaactct
ctgagcatcatgccagttttggatggacccacgccaccacctgactcgagaagtacacct
caagacagtgggcaacaggagtgctaccttgtgttcattggctgttccctgaaggaagac
aatctcaaggactggctacggcagtcagctaagcagaagcctcagagaaaagctctgaag
accaggggaatgctgactcagcaggagatcaggaacatccatgtgaagcgccacctggac
cccctacctgcaggctatttttacaatggcacccagtttgttaacttctttggtgacaag
accgattttcacccactcatggaccagttcatgaatgactatgtagaagaagcaaaccgg
gaaattgaaaggtacaaccgtgagctggagcagcaggagtaccatgacctttttgagcag
aagtcctag
DBGET
integrated database retrieval system
