Sciurus carolinensis (gray squirrel): 124978043
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Entry
124978043 CDS
T08117
Name
(RefSeq) visual system homeobox 1
KO
K09335
visual system homeobox protein 1
Organism
ncar
Sciurus carolinensis (gray squirrel)
Brite
KEGG Orthology (KO) [BR:
ncar00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ncar03000
]
124978043
Transcription factors [BR:
ncar03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain Paired-related
124978043
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
Homeodomain
Homeobox_KN
Motif
Other DBs
NCBI-GeneID:
124978043
NCBI-ProteinID:
XP_047398015
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All DBs
Position
2:complement(49508056..49514324)
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AA seq
365 aa
AA seq
DB search
MTGRDAHSDGRTGSRALVPGGSSTGSRSRGFAITDLLGLEADLPAPAGPGPGSGCEGPAT
TPCPGPGIGGSCLARGALPLGLGLLCGFSAQPPAAARAPCLLLADMPFLPPGGPESAAPQ
VPGRPPPALSRQKRSESVSTSDEESPSEDRSDLKASPTPGKRKKRRHRTVFTAHQLEELE
KAFSEAHYPDVYAREMLAVKTELPEDRIQVWFQNRRAKWRKREKRWGGSSVMAEYGLYGA
MVRHCIPLPDSVLNSTDGGLRGSCAPWLLGMHKKSTGIIRKPESEDKLQGLWGSDHLKEG
SSDSQAGPQRGSDKASPENVLEDVAIDLSSSARQETKKTHQGASTQGCSDSTGLEGLQPG
KVGDL
NT seq
1098 nt
NT seq
+upstream
nt +downstream
nt
atgaccggacgggacgcgcattcggacgggcgcaccggcagtagggcactggtgccgggc
ggttcctctacgggatcgcgctcccggggtttcgccatcacggacctgttgggcttggag
gccgacctgccggcacccgccggccccgggccaggatcaggctgcgaaggcccagcgaca
accccgtgcccgggccccgggatcggtggctcctgcttagcgcgcggggctctcccactg
gggctgggcctcctctgcggcttcagtgcgcagccacccgctgctgctcgggcgccctgc
ctgctcctagctgacatgccgttcctgccacccgggggacctgagtctgctgccccgcaa
gtccctggccgcccaccgcctgcgctcagccgccagaagcgcagtgagagtgtctcgacg
tccgatgaggaaagtccctctgaagacaggagtgacctgaaggcatctcccactccagga
aagaggaagaagcggcggcacaggacagttttcacggctcaccagctggaagagctggag
aaggcattcagtgaggcccactaccctgatgtgtatgctcgggaaatgctggctgtaaaa
actgaactccctgaagaccgaattcaggtctggtttcaaaaccggagggccaagtggcgc
aagcgagagaagcgctggggcggcagcagcgtgatggctgagtatggtctgtacggcgcg
atggtgagacactgcatcccgctgccggactcagtgctcaactccacggacggtggcctg
cggggctcctgtgcgccctggctcctgggaatgcataaaaaatccacaggaataataagg
aaaccagaaagtgaagacaagttgcaaggactctggggttctgaccacctcaaggaaggt
tctagtgatagtcaggcaggaccccagagaggctcggacaaagccagccctgagaatgtc
ttggaagatgtggccatcgatctctccagctctgccaggcaggagaccaagaaaacacac
cagggggccagtactcaaggatgctctgactccactgggctggaggggctccagccaggg
aaggtgggagacttatga
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