Sciurus carolinensis (gray squirrel): 124978044
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Entry
124978044 CDS
T08117
Name
(RefSeq) homeobox protein Nkx-2.1 isoform X1
KO
K09342
homeobox protein Nkx-2.1
Organism
ncar
Sciurus carolinensis (gray squirrel)
Brite
KEGG Orthology (KO) [BR:
ncar00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ncar03000
]
124978044
Transcription factors [BR:
ncar03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain ANTP: NKL
124978044
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Gene cluster
GFIT
Motif
Pfam:
Homeodomain
Homeobox_KN
Motif
Other DBs
NCBI-GeneID:
124978044
NCBI-ProteinID:
XP_047398017
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Position
2:complement(137959602..137969021)
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AA seq
425 aa
AA seq
DB search
MPRLWWLPKTWRRAKTNARQPPSLHSSQLRRTRSTPLRVHPTRSALSRRRIMSMSPKHTT
PFSVSDILSPLEESYKKVGMEGGGLGAPLAAYRQGQAAPPAAAMQQHAVGHHGAVTAAYH
MTAAGVPQLSHSAVGGYCNGNLGNMSELPPYQDTMRNSASGPGWYGANPDPRFPAISRFM
GPASGMNMSGMGGLGSLGDVSKNMAPLPSAPRRKRRVLFSQAQVYELERRFKQQKYLSAP
EREHLASMIHLTPTQVKIWFQNHRYKMKRQAKDKAAQQQLQQDSGGGGGGGGGGGAGCPQ
QQQAQQQSPRRVAVPVLVKDGKPCQAGAPAPGAASLQGHAQQQAQQQAQAAQAAAAAISV
GSGGAGLGAHPGHQPGSAGQSPDLAHHAASPAALQGQVSSLSHLNSSGSDYGTMSCSTLL
YGRTW
NT seq
1278 nt
NT seq
+upstream
nt +downstream
nt
atgccccgcctctggtggctgcctaaaacctggcgccgggctaaaacaaacgcgaggcag
cccccgagcctccactcaagccaattaaggcggactcggtccactccgttacgtgtacat
ccaacaagatcggcgttaagccgccgccgaatcatgtcgatgagtccaaagcacacgact
ccgttctcagtgtctgacatcttgagtcccctggaggaaagctacaagaaagtgggcatg
gagggcggcggcctcggggctccgctggcggcgtacaggcagggccaggcggcaccgccg
gccgcggctatgcagcagcacgccgtggggcaccacggtgccgtcacggccgcctaccac
atgacggcggcgggggtgccccagctctcgcactccgctgtggggggctactgcaacggc
aacctgggcaacatgagcgagctgccgccctaccaggacaccatgcgaaacagcgcttcc
ggccccggatggtacggcgccaacccagacccgcgcttccccgccatctctcgcttcatg
ggccctgcaagcggcatgaacatgagcggcatgggcggcctgggctcgctgggggacgtg
agcaagaatatggccccgctgcccagcgcgccgcgccggaagcgccgggtgctcttctcc
caggctcaggtgtacgagctggagcgacgcttcaaacaacagaaatacctgtcggcgccg
gagcgcgagcacctggccagcatgatccacctgacacccacgcaggttaagatctggttc
cagaatcaccgctacaaaatgaagcgccaggccaaggacaaagcggcacagcagcaattg
cagcaggacagcggcggcggcggcggcgggggtggcggcgggggcgccggttgcccacag
cagcagcaggctcagcagcagtcgccgcgccgtgtggcagtgccagtcctggtgaaagac
ggcaaaccctgccaggctggcgctccggcgccgggcgccgccagcctacaaggccatgca
caacagcaggcgcagcagcaggctcaggccgcccaggcggcagcagcggctatctcggtc
ggcagcggtggcgcaggcttgggcgcacacccgggccaccagcccggcagcgcgggccag
tctccggacctggcgcaccacgcagccagtcccgcagcgctgcagggccaggtctccagc
ctgtcccacctgaactcctcaggctcggactatggcaccatgtcctgctccaccttgcta
tatggtcggacctggtga
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