Sciurus carolinensis (gray squirrel): 124978187
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Entry
124978187 CDS
T08117
Name
(RefSeq) LOW QUALITY PROTEIN: WD repeat-containing protein 76-like
KO
K24755
WD repeat-containing protein 76
Organism
ncar
Sciurus carolinensis (gray squirrel)
Brite
KEGG Orthology (KO) [BR:
ncar00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
ncar04121
]
124978187
03036 Chromosome and associated proteins [BR:
ncar03036
]
124978187
03400 DNA repair and recombination proteins [BR:
ncar03400
]
124978187
Ubiquitin system [BR:
ncar04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
Cul4 complex
Target recognizing subunit (DCAF)
124978187
Chromosome and associated proteins [BR:
ncar03036
]
Eukaryotic type
Heterochromatin formation proteins
Other heterochromatin formation proteins
124978187
DNA repair and recombination proteins [BR:
ncar03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
Other MMR factors
124978187
DSBR (double strand breaks repair)
Other DSBR factors
Others
124978187
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Beta-prop_RIG_2nd
WD40_Prp19
WD40_CDC20-Fz
WDR55
WD40
WD40_WDHD1_1st
Beta-prop_EML_2
Beta-prop_WDR90_POC16_2nd
Beta-prop_EML
Beta-prop_EIPR1
WD_LRWD1
Beta-prop_WDR75_1st
Beta-prop_TEP1_2nd
WD40_RFWD3
Motif
Other DBs
NCBI-GeneID:
124978187
NCBI-ProteinID:
XP_047398284
LinkDB
All DBs
Position
2:complement(108843361..108886351)
Genome browser
AA seq
623 aa
AA seq
DB search
MSQSSAEAEEKACSRQRSQVKVNEYKXNQDIFHTSLRPVQTTVLGKTAKVYLAPFSLTNY
KLGQFKCSKSLLEKNSNDAVMCKKFKKTELKKTCRKILIPKMKALSSKAESTLQKSSLDV
HAETNELEHQDSSDAVILNVDLESSDEDTTPDLDDFSGLSPYERKRLKNISENANFFASL
QLSESAARLREMIKKRQPPKSKRKTPKKRENEIGCRRSMRLLKVDPSGVSLPATPAQPTL
VEDENPLLPPGPLEMIPENQDDNNELFKEFLQTWGEMSKTSRKNTEKGLSSIKSYKTNLN
GMVVSEDTVHKVTNSSIFSVALHPSETRILVAAGSKHGQIGLWDLTQQRKEDGTYVFYPH
SQPVSCLYFSPANPAHLLSLSYDGTLRCGDFSKAVFEEVYRNEKSGFSSFDFLTEDASTL
LVGHWDGSMSLVDRRTPGTSFEKLISSSLRKIRTVHVHPVYRQYIMAAGLRDIHIYDVRH
LKLRGSQPLISSTEHKKSIASAYFSPVTGNRVVTTCADCKLRIFDSSCISSQIPLLTTIR
HNTITGRWLTRFQAVWDPKQEDCIIVGSMAHPRRVEIFHETGERVHSFLGECLLSVCSIN
VMHPTQYIMAGGNSSGRLHVFMN
NT seq
1872 nt
NT seq
+upstream
nt +downstream
nt
atgtcgcagtcaagcgctgaggcagaggagaaggcgtgctccagacagcgttcccaggtg
aaggtgaatgaatataaangaaatcaagacatctttcatacatctctgagaccagtacag
accacagttttaggaaaaacagctaaggtttatcttgctcccttttcactcactaattac
aagttaggtcaatttaagtgctccaaatccctattagaaaagaattctaatgatgcagtg
atgtgtaagaagtttaagaagactgaattaaagaaaacttgcagaaaaattttaattcca
aagatgaaagctctatcttccaaggcagaatctactctgcaaaaatcatccttagatgtt
catgctgaaactaatgagctagaacaccaggacagttcagatgctgtgattctcaatgtt
gatttggaaagcagtgatgaagataccacacctgacctggatgatttttcaggattgtca
ccatatgaaaggaagagactgaagaacatatcagaaaatgcaaacttttttgcttctctt
cagttgtctgagtcagctgccagactccgtgaaatgataaaaaagagacaacctcctaag
tccaagagaaagacacctaagaagagagaaaatgagattggatgtagaaggtccatgcga
ttgctaaaagtggatccttcaggagtttcattaccagcaactccagcacagccgacatta
gtagaagatgaaaatcctttgttacctcctgggcctttagaaatgattcctgaaaatcaa
gatgacaacaatgaactatttaaagaatttctgcagacatggggtgaaatgagcaagaca
agtcgtaagaacactgagaaggggctatccagcattaaaagctacaaaaccaatttaaat
ggaatggtcgttagtgaagatactgttcataaagttaccaacagctcaatattctctgtg
gctctccacccatcagaaactagaattttggtagcggctgggtccaaacatgggcaaatt
ggactttgggatttgacccagcaacgaaaagaagatggaacatatgttttttatccccac
agtcaacccgttagctgtctttacttctcacccgccaatccagcccacctactatcactg
agctatgatggcacattacgatgtggggatttttccaaggctgtatttgaagaggtatat
agaaatgaaaaaagtggcttttcctcctttgacttcttgacagaagatgcttccacttta
ctagtaggacactgggatggaagtatgtcactggtggatagacggacacctggaacttct
ttcgagaaactaattagttcttctttgagaaaaataagaactgttcatgtccacccagtg
tacagacagtatatcatggctgcagggctgagggatattcatatttatgacgtcaggcac
ctgaaactcagaggaagccagcctttgatttcttccactgaacacaaaaagagcattgct
tctgcctatttttcacctgttactggtaacagagtagtgaccacatgtgctgattgtaag
ctgagaatctttgacagcagctgtatttcttcccagattcctctccttaccaccatcagg
cacaacacgatcactgggcgatggctgaccaggttccaagctgtgtgggaccctaaacaa
gaagattgtatcatagttggcagcatggcccatccacgacgagtagaaatcttccatgag
acaggagagagggtgcattcttttcttggagaatgtcttctctctgtgtgttccatcaat
gtcatgcacccgactcagtatattatggctggaggtaattccagtgggaggttacatgtt
tttatgaattaa
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