Sciurus carolinensis (gray squirrel): 124978258
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Entry
124978258 CDS
T08117
Name
(RefSeq) LOW QUALITY PROTEIN: leucine-rich repeat-containing protein 49-like
KO
K16606
leucine-rich repeat-containing protein 49
Organism
ncar
Sciurus carolinensis (gray squirrel)
Brite
KEGG Orthology (KO) [BR:
ncar00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
ncar03037
]
124978258
04812 Cytoskeleton proteins [BR:
ncar04812
]
124978258
Cilium and associated proteins [BR:
ncar03037
]
Primary cilia and associated proteins
Tubulin polyglutamylase and associated proteins
124978258
Cytoskeleton proteins [BR:
ncar04812
]
Eukaryotic cytoskeleton proteins
Microtubules
Tubulin-binding proteins
Tubulin modification proteins
Tubulin polyglutamylase complex components
124978258
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
LRR_4
LRR_9
LRR_8
LRR_14
LRR_LRWD1
FTH
TAFII28
Motif
Other DBs
NCBI-GeneID:
124978258
NCBI-ProteinID:
XP_047398419
LinkDB
All DBs
Position
2:complement(84681186..84855873)
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AA seq
752 aa
AA seq
DB search
MIPGKYRSVSGRTANNVNCGLHLVIQTSSLPEKNKVEFKINRETSSFPGRLLQHDLERNY
SSRQGDGRVISPSPRNKSSCISSTTNVTELCGLEMKTATSSLSAFGDSSIQTPSKSRIRQ
GCHSAGPNVSGDHINLVSSSMPSFPILHRSSEEKILYSDRLTLERQKLTVCPIIDGEEHL
RLLNFQHNFITRIQNISNLQRLIFLDLYDNQIEEISGLSTLRSLRVLLLGKNRIKKISNL
ENLKSLDVLDLHGNQITRIENVNHLCDLRVLNLARNLLGHVDNLNGLDSLTELNLRHNQI
TSVRDVDNLPCLQRLFLSFNNISSFDSVSCLADSTSLSDITFDGNPIAQESWYKHTVLQN
MMQLRQLDMKRITEEERRMASVVAKKEEEKKRESHKQSLLKEKKRLTINNVARKWDLQQR
VTNISTNPDRKDSDSPPQDPCQSDGSTISAFPEETGSLDSGLNNALLGLSVTDTHLVEVD
GDTLSLYGSGALESLDRNWSVQTAGMVTTVSFTFIEFDEIVQVLPKLKIKFPNSLHLKFK
XTNLIMLQQFNALAQLRRIDQLTIDPQGNPVVNFTLWKYYVLFRLSHFSMQKINGTEVTQ
NDMIMAXRLFGILXHVASSELPQYRMISILGDARKKQFRYLLETKGKKPGIVIEENNDSK
RLVGENTNRATLNYTTREFYHEKLEEIKEKKKFCKMYIEDLVKEATEINMKNEALQKLWP
QMFIELVRDAVIEIRNKNSYMKLCLQQITDQK
NT seq
2259 nt
NT seq
+upstream
nt +downstream
nt
atgattcccgggaaataccgctctgtttctggccggactgcaaacaacgtgaattgtggg
cttcatctggttattcaaacatcatcgcttcctgaaaaaaacaaagttgaattcaagatt
aatagagaaacatcttcatttcctggaagactcttacaacatgaccttgaaagaaactac
tcaagtaggcaaggagatggaagagtaataagtccttcgcctcgtaataaatcatcatgc
atctcatccacaacaaacgtgacagaactctgtgggctggaaatgaaaactgccacaagc
tccttgtcagcatttggagattcttccattcagacaccttcaaagtccagaatccggcag
ggatgtcatagtgctggcccaaatgtatctggtgatcatattaatttggtgagctcatca
atgccatcatttcctattctccaccgttcttctgaagagaaaattctttactcagacagg
ttgaccctagaaaggcaaaagctaactgtatgccctatcattgatggagaagaacatctt
cgtttgttgaactttcagcacaattttataactcggatccaaaatatttcaaatctacag
aggttaatatttttggatttatatgataaccagattgaagaaattagtggtctttctact
ctaagatcccttcgtgttcttctcttggggaaaaacagaatcaagaaaatttcaaacttg
gagaatctaaaaagcttagatgtgttggaccttcatggaaatcagattaccagaattgaa
aatgtcaatcatttgtgtgatttgagagttttgaatcttgccaggaatcttttgggtcat
gttgataatcttaatggactggattcactaactgaacttaatctgcgacacaatcaaatc
acttctgtgagagatgtggataatttgccctgcctccaacgtctgtttctcagcttcaac
aatatatctagttttgacagtgtttcctgtcttgctgactctacttccctatcagacatc
acttttgatggcaacccaatagctcaagagtcatggtacaaacacactgtccttcagaat
atgatgcagctgcgccagctagatatgaagagaatcacggaagaagaaaggcgtatggca
tctgtagtagccaaaaaagaggaagagaagaagcgggaaagtcataaacaatctttgctt
aaggagaagaaaagattaacaattaacaacgtagctcgaaagtgggacttgcaacaacga
gtgaccaatatctctacaaacccagatagaaaagattctgattctcctcctcaggaccct
tgtcagagtgacggaagcaccatctctgcatttccagaggaaacagggtctctagactca
ggactcaacaatgctttattaggtttatctgtcacagacacacaccttgtcgaagtggat
ggagatacactttccctgtatggctcaggagcactagaatctctggatcgaaattggagt
gttcaaacagcaggaatggtcacaacagtctccttcacattcatagaatttgatgaaatt
gtccaagtgctccccaaattgaagattaagtttcctaattctctgcaccttaaattcaag
ngaacgaatcttataatgctgcagcaatttaatgcactagcacaacttcgtcgtattgac
cagctgacaattgatcctcaaggaaatccagttgtcaattttacgctctggaaatactat
gtactgtttaggctgagccattttagtatgcagaaaataaatggaacagaggtgacacag
aatgacatgataatggctngaaggctctttggaatcctangacatgtagcatcttctgag
ttacctcagtaccggatgatttcaattctgggtgatgccaggaaaaagcaatttcggtat
ctactagaaaccaaaggaaaaaaacctggtattgtcattgaagaaaataacgacagcaaa
agacttgtgggagaaaacacaaatcgtgctacactcaattataccacaagagaattttat
catgaaaagctagaggaaataaaggagaaaaagaaattctgcaagatgtatatagaagat
cttgtgaaggaagccacagaaatcaatatgaaaaatgaagctttgcagaagctttggcca
cagatgttcattgagcttgttagggatgcagttatagaaatccgcaataaaaattcctat
atgaagctctgcctacagcaaataactgaccaaaaatag
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