Sciurus carolinensis (gray squirrel): 124978259
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Entry
124978259 CDS
T08117
Name
(RefSeq) nicastrin
KO
K06171
nicastrin
Organism
ncar
Sciurus carolinensis (gray squirrel)
Pathway
ncar04330
Notch signaling pathway
ncar05010
Alzheimer disease
Brite
KEGG Orthology (KO) [BR:
ncar00001
]
09130 Environmental Information Processing
09132 Signal transduction
04330 Notch signaling pathway
124978259
09160 Human Diseases
09164 Neurodegenerative disease
05010 Alzheimer disease
124978259
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GFIT
Motif
Pfam:
Nicastrin
Ncstrn_small
Peptidase_M28
Motif
Other DBs
NCBI-GeneID:
124978259
NCBI-ProteinID:
XP_047398421
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Position
1:complement(89741200..89757472)
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AA seq
709 aa
AA seq
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MATAGGHSGADLGSLALFRLLSFSVLLTGLCRGNSVERKIYIPLNKTAPCVRLLNATHQI
GCQSSISGDTGVIHVVEKEEDLQWVLTDGPNPPYMVLLEGKLFTRDVMEKLKGRTSRIAG
LAVTLAKPRPTPDFSPSVQCPNDGFGIYSNSYGSEFAHCKEVLWNNLGNGLAYEDFSFPI
FLLEDENETKVIKQCYQDHNLSQNGSAPTFPLCAMQLFSHMHAVISTATCMRRSFIQSTF
SINPEIVCDPLSDYNVWSMLRPINTSGALAPHDRVVVAATRLDSRSFFWNVAPGAESAVA
SFVTQLAAAEALQKAPDVTTLPHNVMFVFFQGETFDYIGSSRMVYDMEKGKFPVQLENID
SFVELGQVALRTSAELWMHTDPMSQKNESVRNQVEDLLTILEKSGTGVPDIILRRLNQSQ
ALPPSSLQRFLRARNISGVVLADHSHFFHNQYYQSIYDTAENINMSYPEWQSPEEDLNFV
TETAKALANVATVLARALYELAGGSNFSNTIQADPHTVTRLLYGFLVRANNSWFQSILRQ
DLRAYLGDGPLQHYIAVSSPTNATYVVQYALANLTGKVIDLTREQCQDPSKVPNENKDLY
EYSWVQGPLNSNETDRLPRCVRSTARLARALSPAFELSQWSSTEYSTWTESRWKDIHARI
FLIASKELELITLMVGFGILLFSLIVTYCVNAKADVLFIVPREPGAVSY
NT seq
2130 nt
NT seq
+upstream
nt +downstream
nt
atggccacggctgggggccactctggggctgacctgggaagtctggctctttttcgcctt
ctgtctttctccgtcctactaacaggtttgtgcaggggaaattcagtggagaggaagatc
tacatccccttaaataaaacagctccctgtgtccgtctgctcaatgccactcatcagatt
ggctgccagtcttcaattagtggagacacaggggttatccatgtagtggagaaagaagag
gacctgcagtgggtgttgacagatggccctaaccccccttacatggttctgctagagggc
aaactctttaccagggatgtaatggagaagctgaaggggagaaccagccgaattgctggt
cttgcagtgaccttggccaagccccgtcctaccccggacttctctcctagtgtgcagtgc
ccaaatgatgggtttggtatttactccaactcctatgggtcagagtttgctcattgcaaa
gaagttctgtggaacaatctgggcaatggcttggcatatgaagacttcagtttccctatc
tttcttcttgaagatgaaaatgaaactaaggtcatcaagcagtgctatcaagatcacaac
ctgagtcagaatggctcagcaccgaccttcccactgtgtgctatgcagctcttctcacac
atgcacgctgtcatcagcactgccacctgcatgcggcgcagcttcatccagagcaccttc
agtatcaacccagaaatcgtctgtgaccccctgtctgactacaacgtctggagcatgctt
aggcctataaatacatctggggcattagctcctcatgacagggttgtggttgctgccacc
cggctggacagccgttcctttttctggaatgtggctccaggagctgaaagtgctgttgcc
tccttcgtcacccagctggctgcagctgaagctttgcaaaaggcacctgatgtgactacc
ttgccacacaatgtcatgtttgtcttctttcaaggggaaacgtttgactatatcggtagc
tcaagaatggtctacgatatggagaagggcaagtttcctgtgcaattagagaatattgac
tcatttgtggagctgggacaggtggcattaagaacttctgcagagctctggatgcacaca
gatcccatgtctcagaaaaatgagtctgtgcggaaccaggtggaggacctcctgaccata
ctggagaagagtggtactggagtccctgatatcatcctgaggaggctgaatcagtcccaa
gcgctaccaccctcttctttgcagcgatttcttcgagctcgaaatatctctggtgttgtt
ctggctgaccactctcatttcttccataaccaatattaccagagcatttatgacactgct
gagaatatcaacatgagttatcctgagtggcagagccctgaagaagacttgaactttgtg
acagaaactgccaaggccctggcgaatgtggccacagtgctggcacgtgccctgtacgaa
cttgcagggggatccaacttcagcaacacaattcaggctgatccccacacggtcactcgc
ctgctatatgggttcctggttagagccaacaattcatggttccagtctatcctcagacag
gaccttagggcctacttgggcgatgggcctcttcaacattacatcgctgtctccagcccc
accaatgccacttatgttgtgcagtatgccttggcaaatttgactggcaaggtgatcgac
ctcacccgagagcagtgccaggatccaagtaaagttccaaatgaaaacaaggatctatat
gagtactcatgggttcagggccctttgaattccaatgagacagatcggctcccccggtgt
gtgcgttccacggcacgactggccagggctttgtctcctgcctttgaactgagtcaatgg
agctccactgaatattccacatggactgagagccgctggaaagatatccatgcccggata
ttcctcattgccagcaaagagcttgagcttatcacactgatggtggggttcggcatcctt
ctcttctctctcatcgtcacctactgcgtcaatgccaaagctgatgtccttttcattgtt
ccgcgagagccaggagctgtgtcttactaa
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