Sciurus carolinensis (gray squirrel): 124978264
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Entry
124978264 CDS
T08117
Name
(RefSeq) sialoadhesin-like isoform X1
KO
K06548
sialoadhesin
Organism
ncar
Sciurus carolinensis (gray squirrel)
Pathway
ncar04514
Cell adhesion molecules
Brite
KEGG Orthology (KO) [BR:
ncar00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecules
124978264
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04090 CD molecules [BR:
ncar04090
]
124978264
04091 Lectins [BR:
ncar04091
]
124978264
CD molecules [BR:
ncar04090
]
Proteins
124978264
Lectins [BR:
ncar04091
]
I-type lectins (Siglecs)
124978264
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ig_3
Ig_2
I-set
ig
V-set
Ig_4
C2-set_2
Izumo-Ig
C1-set
Ig_CD22
Motif
Other DBs
NCBI-GeneID:
124978264
NCBI-ProteinID:
XP_047398424
LinkDB
All DBs
Position
2:complement(29210192..29238379)
Genome browser
AA seq
1730 aa
AA seq
DB search
MGSLLWLLLLVSFFPTGHTSWGVSSPKTVQGVKGSCLLIPCIFSFPANVEVPNSITAIWY
FDYWGQRQVVTHSAEPSKVEARFRDRAQLLGNVERNVCNLLLKDLQPEDSGTYSFRFEIS
VSNSWTDAKGTSVSVTEKPSKPVITSPMELREGMEVNFNCSTPYSCLQEPVSLTWQGQDP
ARSVISSFQKLEPTGVGHLETLHMVLSWQDHGRTLRCEVSVASLRSQSEIHLQVQYAPRG
VEVRLSPAGRNILPGDLVTLTCQVNSSYPEVSSVQWLKDGVLLEANGRVLQLSQAAWSDA
GVYTCEAGNGIGSSVSPPVRLHVFMAEVKVSPAGSILENQTVTLSCGTPKEAPSELRYAW
YKNNILLEEAQSPTLLLPSVTRADTGFYFCEVHNTQGSERSGPVSVVVNHPPLAPDLTAF
LETQAGLMGILHCSVVSEPVATLVLSHGGHILASSSGERDYNPRFSISSAPNSLRLEIRD
LQQTDSGEYECSATNSLGNSTSILDFHANAARLTISPAAKVVEGQAVTLSCRSGLSPTLD
TRFSWYRNGVLLLEGHSSNLLLPAASSSDAGSYHCRAQDSHSASGPSLPVVLTVLHPPRQ
PLFTAQLDLSAAGAGPGRHGLLLCRVESDPPAQLRLLHKDHVVATSVSSHSGCSTCGGCS
QRAKVTKAPNLLRVEIHNPVLEDEGVYLCEASNALGNASASATFNAQATVLVIAPSNTLR
EGSEANLTCNVSRETTGSPANFSWFRNGALWAQGPVETMRLLPVARTDAALYACHLITEG
GAQLSAPVILSVLYPPDPPKLSALLDMGQGHMAVFVCTVDSRPLAQLALFHEERLLASSL
GPQLPSHGRLQAKATTNSLQLEIRELGLRDSGNYRCEATNVLGSTNTSLFFQVRGAWVQV
SPSPELQEGQAVVLSCQVPTGVPEGTSYHWYRDGQLLQESNSAMLRFAAITLKQAGAYHC
QAQAPGSATTSLAAPVSLRVSYSPRQAILTTLMDTGPGRLGLLLCRVDSDPPAQLQLLHG
DRLVASTLQGVAETASNSPRLQVAVAPNTLRLEIHNTVLEDEGIYTCEATNTLGKASASA
NFDAQAVSVQVWPKAMVQEGQQVNLTCLVWATNLAQLTYTWYQDGQQRLGARSISLPNVT
VTDAASYRCGVGLPGQAPRLSRPATLDILYAPRSLRLTYLLESHGGQLALILCTVDSRPP
AQMALSHAGRLLASSTAASVPNTLRLELQEPQPSDEGLYSCSAHSPLGQANTSLELQLEG
IRVTLTPSATVPEGNPITVTCEDTAARPPSLYIWYHNGHWLQEGPGTTLEFPMATRAHAG
SYSCQVQDTQGTRSSRPAALQVLYAPRDAVLSSFRDSRARPMTVIQCTVDSEPAAELTLS
HNSKVLATSNGLHDSASGMGHVQVTRNMLRLQMQDVHAGDDVYVCTARNLLGSVSTTGQL
QAEGVHVVAEPGLDVPEGAALNLSCHLPGGPGLPSNSTFTWFWNGRPLHTESVPTLTFAH
VARAQAGLYHCWADLPSGATTSAPVLLRVLYPPKMPTMTVFVEPEGGLQGILDCQVDSEP
FASLTLHLGSRLVASSKPQEAPIESHIRVSASPNALRVDIKELRPSDQGEYVCSASNALG
SASASTYFGVRALHRLHLFQWLLWFLGLLVGCLCLLLGLGAYHNWRRRCSDKLKVGENSV
EMAPQKDSTQIWPPEEEVPPFPPNSRVRPCLTGSLKHEQGADRCHQHLRC
NT seq
5193 nt
NT seq
+upstream
nt +downstream
nt
atgggctccctgctctggctgctccttctggtctcattcttcccaacaggccacacctca
tggggtgtctccagtcccaagactgtgcagggagtgaaggggtcttgcctgctcatcccc
tgcatcttcagcttccctgccaatgtggaagtgcctaatagcatcacagccatctggtac
tttgactactggggccagcggcaggtggtgactcactctgcagagccctcgaaggtggag
gctcgttttcgcgaccgtgcccagctgctggggaatgtggaacgcaacgtctgcaacctc
ttgctgaaggacctgcagcctgaggactcaggcacctacagcttccgctttgagatcagt
gtcagcaacagctggacagatgccaaaggcacctcggtctctgtgacagagaagcccagt
aagcccgtcattacctcccccatggagctgcgagaaggcatggaagtgaacttcaactgt
tccacgccctactcgtgcctgcaggagccagtcagcctgacatggcagggccaggacccc
gctcgctctgtcatctccagcttccagaagcttgaacccaccggtgtcggccacctggag
acgcttcacatggttctgtcatggcaggaccatggccggacactgcgctgtgaggtctca
gtggccagcctcaggagtcagagtgagattcacctccaagtgcagtatgcccctagaggc
gtggaggtccgcctcagccctgcagggcggaacatccttccaggtgatctggtcacactc
acctgccaagtgaacagcagctaccctgaggtcagttctgtgcagtggctcaaggacggg
gtgctcctggaagccaatggtcgcgtgctgcagttgtcccaggcagcctggagcgatgcc
ggcgtctacacctgcgaagctggaaacggcattggttcttcggtctcacccccagtcagg
ctccatgtgttcatggctgaggtcaaggtgagcccagcaggctccattctggagaaccag
actgtgacgctgtcctgcggcactcccaaagaggcgcccagtgagctccgctatgcgtgg
tacaagaacaatatcctgctagaggaagcacaaagtcccactctcctgctgccctcagtc
accagggctgacactggcttctacttctgtgaggtgcacaacacccagggcagtgagcgc
tctggccctgtcagtgtggtggtcaaccacccaccccttgctccagacctgaccgccttc
ctggagacacaggctgggctcatgggcatcctccactgctccgtggtcagtgagccagtg
gccacactggtgctgtcacatggcggccacatcttggcctccagttctggggagagagat
tacaacccccgcttcagcatctcctctgcacctaactccctgcgcctggagatccgagac
ctgcaacaaactgacagtggagagtatgagtgctcagccaccaactcccttggaaattca
acctccatcttggacttccatgccaatgcggcccgcctcaccatcagtccggcagccaag
gtggtggaggggcaggccgtgactctgagctgcagaagtggcctgagcccgactctggac
acccgcttctcctggtaccggaacggagtcctgcttctcgagggacacagcagcaacctc
ctgcttcctgctgcctccagcagcgatgccggctcataccactgtcgggcccaggacagc
cacagtgccagcggcccctccttgcctgtggtcctcactgtgctccaccctccacgccag
cccctgttcaccgcccagctggacctcagtgctgccggagctgggccgggacggcacggc
ctcctcttgtgccgtgtggaaagtgaccctcctgcccagttacgcctgctccacaaggac
catgttgtggccacttccgtgtcatcacacagtggctgcagcacctgtgggggctgctcc
cagcgggcaaaagtcaccaaagcccccaacttgctgcgggtggagatccacaatccagtg
ttggaggacgagggcgtgtacctgtgtgaggccagcaacgcactgggcaacgcctcagcc
tcggccaccttcaatgcccaggccacggtcctggtcatcgcaccatccaacacgcttcgg
gagggctcagaggccaacctgacttgcaatgtgagccgggaaaccacaggcagccctgcc
aacttctcctggttccggaatggggcactgtgggcccagggccccgtggaaactatgaga
ctgctgcccgtggccagaaccgatgctgccctctacgcctgtcacctcatcacagagggt
ggtgcccagctctctgctcccgtgatcctgagtgtgctctatcccccagacccaccaaag
ctgtcggccctcctggacatgggtcagggccacatggctgtgttcgtttgcactgtggac
agccgtcctctggctcagttagccctgttccatgaggagcgcctcctggccagcagtctg
ggaccacagctcccatcccacggtaggctgcaggccaaggccacaaccaactccctacag
ctggagattcgagaactgggtcttagggattctggaaactaccgctgtgaggccacaaat
gttcttggatcaaccaacacctcgctcttcttccaggtccgaggtgcctgggtccaggtc
tcaccatcgcctgagctccaggagggtcaggctgtggtcctgagctgccaggtgcccacg
ggggtccctgaagggacctcatatcactggtatcgagatggccagctcctccaggagtcg
aactctgccatgctccgttttgcagccataactctgaagcaagctggggcctaccattgc
caagctcaggccccaggctcagcaaccaccagcctggccgctccagtcagcctccgtgtg
tcctactctccacgccaggccatactcaccaccctgatggacacgggcccggggcgactg
ggcctcctcctctgccgtgtggacagtgaccctccagcccagctgcagctgctccatggg
gaccgccttgtggcctcaacactacaaggtgtagcagaaactgcaagcaactctcctcgg
ctgcaggtggctgtggcccccaacactctgcgcctggagattcacaacacagtgctggaa
gatgagggcatctacacctgtgaggccaccaacactctaggcaaggcctcagcctcggcc
aacttcgatgcccaggctgtgagcgtgcaggtatggcccaaggccatggtgcaggaggga
cagcaggtgaacctgacctgccttgtgtgggccaccaacctggcccagctcacctacacg
tggtaccaggatgggcagcagcgtcttggcgcccgctccatctccttgcccaacgtcacg
gtcacagatgctgcctcctatcgctgtggtgtagggctccctggccaggcaccccgcctc
tccagacctgccaccctggacatcctctacgcgccccgcagcctgcgtctgacctacctc
ctagagagccatggtggacagctggccctgatactgtgcactgtggatagtcgcccacct
gcccaaatggcccttagccacgccggccgcctcctggcctcctcaactgctgcttctgtc
ccgaacaccttacgcctggaactacaggagccacagccaagtgatgaggggctctacagc
tgctctgcccacagccccctaggccaagccaacacatccctggagctgcagctagagggt
atacgggtgacactcactccctcggctactgtgcctgaggggaatcccatcacagtgacc
tgtgaggacactgcagcccgcccacccagtctctacatctggtaccataatggccattgg
cttcaggaggggccaggcaccactcttgagttcccaatggccacaagggctcacgcgggt
tcatactcctgccaggtgcaggatacccagggcacacgcagctcccggcctgcggccctg
caagtcctctatgcccctcgagatgccgtcctgtcctccttccgggactccagggccaga
cccatgactgtgatacagtgcactgtggacagtgaacctgctgccgagctgaccctgtcc
cacaacagcaaggtgttagccaccagcaatgggctccatgactcagcatcagggatgggc
cacgtgcaggtgacccgcaacatgctgcggctgcagatgcaagatgtgcatgcaggcgat
gatgtctatgtttgcacagcccgcaacttgctgggttcagttagcaccactgggcagctg
caggcagaaggtgtgcatgtggtagctgagccaggcttggatgtgcctgagggtgcagca
ctgaacttgagctgccacctccctggtggccctgggctcccgagcaactccaccttcaca
tggttctggaatggccggccactacacactgagtctgtgcccactctcactttcgcccat
gtggcccgtgcccaggctgggctgtaccactgctgggctgacctcccctctggggccacc
acctctgctccagtcttgcttcgtgtgctctaccctcccaagatgcccaccatgacagtc
tttgtggagcctgagggtggcctccagggcatcctggactgccaagtggacagtgagccc
tttgccagcctgacccttcaccttggcagccgactggtggcctccagcaaacctcaggaa
gctcccattgagtcacacatccgtgtctcagcctcccctaatgctctgagggtggacatc
aaggagttacggcccagtgaccagggggaatatgtgtgctctgcctccaatgccctgggc
tctgcctctgcctccacctacttcggggtcagagctctacaccggctacatctgttccag
tggctcctctggtttctgggactgctggtgggctgcctgtgcctgctgttgggcctgggg
gcctaccataattggaggaggaggtgttctgataaactgaaggtgggcgagaattcggtg
gagatggctcctcagaaagacagcacacagatctggcccccagaagaagaggtgcctcca
ttcccacccaactccagggtcaggccctgcttaactggctctctcaagcatgaacaaggc
gcagacagatgtcatcagcatcttcgttgctga
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integrated database retrieval system