Sciurus carolinensis (gray squirrel): 124978272
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Entry
124978272 CDS
T08117
Name
(RefSeq) leucine-rich repeat protein 1 isoform X1
KO
K10348
LRR-repeat protein 1
Organism
ncar
Sciurus carolinensis (gray squirrel)
Brite
KEGG Orthology (KO) [BR:
ncar00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
ncar04121
]
124978272
Ubiquitin system [BR:
ncar04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
Cul2 complex
Target recognizing subunit
124978272
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
LRR_8
LRR_4
LRR_1
LRR_14
LRR_6
LRR_LRWD1
LRR_R13L1-DRL21
SapA
Motif
Other DBs
NCBI-GeneID:
124978272
NCBI-ProteinID:
XP_047398450
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All DBs
Position
2:150510097..150520666
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AA seq
425 aa
AA seq
DB search
MKLHCEVEVISRHLPALGLRNRGKGVRAVLSLCQQAPGSQLRPRARDEPGGPRPACLLIS
TMKDKRGTRYEQLKENIEQFFTKFADEGKATVRLKEPPVDICLSKANSGNLKSFLSAMRL
AHKGCDINAPLSTLTSVKTSEFEKFKIKMVITSKKDYPLSKNFPYSLEHLQVSYCGLLRV
DMRMLCLKNLKKLDLSHNHIKKLPATIGDLIHLQELYLNDNHLESFSVALCQSTLQKSLR
SLDLSKNKIKALPVQFCQLRELTDLKLDDNELIQFPFKIGQLANLRFLSATRNKLPYLPS
EFKNLSLEYLDLFGNPFEQPKVFPVIKLQVPVTLLESSARAILYNRIPYGPHIIPFHLCQ
DLDAAKTCVCGRYCLNSFIQGTTTMNLHSVAHTVVLVDNMGGTEAPVSSYFCSLTCYVNS
SDMLK
NT seq
1278 nt
NT seq
+upstream
nt +downstream
nt
atgaagctgcactgcgaggtggaggtgatcagccggcacttgccggctttggggctgagg
aaccgaggcaagggcgtccgagccgtattgagcctttgtcagcaggcgcccgggagtcag
ctgcggccccgcgcaagggacgaaccgggcggcccgcgccccgcctgcctgctcatctcc
accatgaaggacaagcgcgggacccgctatgagcagctaaaggaaaatattgagcagttc
ttcaccaaatttgcagatgaagggaaagccactgtccggttaaaggagcctcctgtggac
atctgtctaagtaaggccaattctggcaatttaaagagtttcctttcagctatgagactg
gctcataaaggctgtgatatcaacgcaccactttcaacgctcacatcagtgaaaacatca
gaatttgaaaaatttaaaattaaaatggttatcacatccaaaaaggactatcccctaagc
aagaactttccatattctctcgaacatcttcaggtttcttattgtgggcttctccgagtt
gacatgcgtatgctttgtttaaaaaaccttaagaaattggacttgagtcataaccacata
aaaaagcttccagctacaattggagatctcattcaccttcaagaactttacctgaatgac
aatcatttggagtcttttagtgtggccttgtgtcagtctacactccagaaatcacttcgc
agtttggatctcagcaaaaacaaaatcaaggcactccctgtacagttttgccagctacga
gaacttacagatttaaaacttgatgataatgaattgattcagtttcctttcaagatagga
caattagcaaaccttcgttttttgtcagcaactcgaaataagcttccatatttgcctagt
gaatttaaaaatctgtcccttgaatacttggatctttttggaaatcctttcgaacagcca
aaagtctttccagttataaaactgcaagtgccagtaacgttattggaatcttctgcacga
gccatactatataataggattccatatggtccgcatatcattcctttccatctttgccaa
gatttggatgctgcaaaaacctgtgtttgtgggagatattgtctgaactctttcattcaa
ggaactactacaatgaatctccactctgttgctcacactgtggtcttagtagataatatg
ggtggtacagaagcacctgttagctcttacttctgttctctaacctgctatgtaaattcc
tctgatatgttaaagtaa
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