Sciurus carolinensis (gray squirrel): 124978840
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Entry
124978840 CDS
T08117
Name
(RefSeq) U3 small nucleolar RNA-associated protein 18 homolog
KO
K14553
U3 small nucleolar RNA-associated protein 18
Organism
ncar
Sciurus carolinensis (gray squirrel)
Pathway
ncar03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
ncar00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
124978840
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
ncar03009
]
124978840
Ribosome biogenesis [BR:
ncar03009
]
Eukaryotic type
90S particles
U3 small nucleolar RNA-associated proteins
124978840
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Beta-prop_EML_2
WD40_Prp19
WD40_WDHD1_1st
WDR55
WD40
WD40_CDC20-Fz
ANAPC4_WD40
Beta-prop_WDR90_POC16_2nd
WD40_MABP1-WDR62_2nd
Beta-prop_WDR19_1st
Beta-prop_HPS5
EIF3I
Beta-prop_EML
CFAP43_N
Cytochrom_D1
Beta-prop_TEP1_C
WD40_MABP1-WDR62_1st
Beta-prop_TEP1_2nd
Pox_D5
DUF7165
Beta-prop_CAF1B_HIR1
Beta-prop_DCAF4
DUF1963
Beta-prop_SPT8
NBCH_WD40
Beta-prop_WDR35_TULP_N
Beta-prop_Vps41
Beta-prop_VPS8
WDR90_beta-prop_4th
Hira
Motif
Other DBs
NCBI-GeneID:
124978840
NCBI-ProteinID:
XP_047398663
LinkDB
All DBs
Position
3:26867323..26902267
Genome browser
AA seq
555 aa
AA seq
DB search
MPPERRSPSKPNRRTRARPDRKTQMRLGQKASTGTGGPLRKAAPSSRRTPPARPSAAAVS
ITVAAAAEERRLRQQNRLTLEEDKPAVERCLEELVFGDVEDDADTLLRRLQGPRVHLHED
SDDSEVENEAKDSFPPQKQPVWMDEEDEDEEMVDMVNNRFRKDMMKNASESKLTKEKLQK
RLKEEFQHAMGGVPAWAESNKRKASSDDESEEDEDDLLHRTGNFISTSASLPRGILKMKN
CQHANAERPTTARISSVQFHPRAQVVMVAGLDNAVSLFQVDGRTNPKIQSIYLDKFPIFK
ACFSANGEEVLATSIRSKVLYVYDMIAGKLIPVHQVRGLKEKIVRRFEVSPDGSFLLING
VAGYSHLLSMKTKELIGSMKVNGRVTASTFSSDSKKIYASSEDGEVYIWDVNSRKCLNRF
VDEGSLRGLSIAISRNGQYVACGSNCGVVNIYNQDSCLQETNPKPVKAIMNLVTGITSLA
FNPTTEILAIASEKLKEAVRLVHLPSCTVFSNFPVTKTNISHVHTMDFSPRSGYFALGNE
KGKALMYRLHHYSDF
NT seq
1668 nt
NT seq
+upstream
nt +downstream
nt
atgccgcccgaacgcaggagcccgtcgaaaccgaaccgtaggacccgcgcaaggccggac
aggaagacccaaatgaggttgggccagaaagccagcacagggacgggtgggccgctccga
aaagctgccccttcatcccggcgtacaccaccagccaggccgagtgccgcagccgtttcg
atcacagtcgccgcggcggcagaagagagacggctccggcagcagaatcgcctgacgctg
gaggaggacaaaccggcagtagagcggtgcttggaagagctggtcttcggtgatgtcgag
gacgacgcggacacgctgctgcggcggctgcagggcccgcgggttcacttgcatgaagac
tctgatgactcggaagtggagaatgaagcaaaagattcttttccccctcagaagcagcca
gtttggatggatgaggaagatgaagatgaggaaatggttgacatggtgaataatcggttt
cggaaagatatgatgaaaaacgcaagcgaaagtaaacttaccaaagaaaaacttcagaag
agactgaaagaagaattccagcatgcgatgggaggagtacctgcctgggcagagagtaat
aagcggaaagcatcttcagatgatgaaagtgaagaggatgaagatgatttgctgcacagg
actgggaatttcatatccacatcagcttctcttccaagaggaatcttgaagatgaagaac
tgccagcatgctaatgccgaacggcctaccactgctcggatctcatcagtacagttccat
cctcgtgcgcaggttgtgatggtcgcggggttggataatgccgtgtcactgtttcaggtt
gatggcagaacaaatcctaaaatccaaagcatctatttggacaagtttccaatctttaag
gcttgttttagtgctaatggagaagaagttttagccacaagtattcgcagcaaggttctt
tatgtctatgatatgatagctggaaagttaattcctgtgcatcaagtgagaggtttgaaa
gagaaaatagtgagaagatttgaagtctccccagatggatccttcctgctcataaatggt
gttgctggttattctcatttgctctcaatgaagaccaaagaactgattggtagcatgaag
gttaatggaagagttacagcatccacattctcttcagatagtaagaaaatatatgcctct
tctgaggatggggaagtttatatttgggatgtgaactctaggaagtgccttaacagattt
gttgatgaaggcagtttacgtggattaagcattgccatatcgaggaatggacaatatgtg
gcttgtggttctaattgtggagtggtgaacatatataatcaagattcttgcctccaagaa
acaaacccaaagccagtgaaagccataatgaacttggttactggtattacttctctggcc
ttcaatcctaccacagaaatcttggcaatagcttcagaaaaattgaaagaagcagtgaga
ttggttcaccttccttcttgtacagtattttctaacttcccagtcactaaaacgaatatt
tctcatgttcataccatggatttttctcccagaagtggatactttgccttggggaatgag
aaaggcaaggccctgatgtataggttgcaccattattcagacttctaa
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