Sciurus carolinensis (gray squirrel): 124978851
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Entry
124978851 CDS
T08117
Name
(RefSeq) E3 ubiquitin/ISG15 ligase TRIM25-like isoform X1
KO
K10652
tripartite motif-containing protein 25 [EC:
2.3.2.27
]
Organism
ncar
Sciurus carolinensis (gray squirrel)
Pathway
ncar04064
NF-kappa B signaling pathway
ncar04622
RIG-I-like receptor signaling pathway
ncar05164
Influenza A
Brite
KEGG Orthology (KO) [BR:
ncar00001
]
09130 Environmental Information Processing
09132 Signal transduction
04064 NF-kappa B signaling pathway
124978851
09150 Organismal Systems
09151 Immune system
04622 RIG-I-like receptor signaling pathway
124978851
09160 Human Diseases
09172 Infectious disease: viral
05164 Influenza A
124978851
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
ncar04121
]
124978851
Enzymes [BR:
ncar01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
124978851
Ubiquitin system [BR:
ncar04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
TRIM/RBCC proteins
124978851
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SPRY
zf-RING_UBOX
PRY
zf-C3HC4_4
zf-C3HC4
zf-C3HC4_2
zf-C3HC4_3
zf-RING_2
zf-RING_5
RING_XB3-XBAT31
U-box
ANCHR-like_BBOX
zf-RING_10
zf-B_box
Prok-RING_4
Motif
Other DBs
NCBI-GeneID:
124978851
NCBI-ProteinID:
XP_047398683
LinkDB
All DBs
Position
3:complement(31743103..31759201)
Genome browser
AA seq
626 aa
AA seq
DB search
MAELFLLSEELSCSICLELFKEPVTTPCGHNFCRSCLDETWAVQGKPYRCPQCRADSPAL
PELRKNTVLCAVVDQYLQAELEQVPATDWTPPSRSAAPGPAPQVACDHCLKAEAVKTCLV
CMASFCQEHLRPHLESPAFQDHPLQLPVRNLMRRKCSQHNRLRDLFCPTHGECICHMCLV
DHKACSPVSVSQASTDLENKLRHKLTVMYGHVSGATRALEDVRTRQQSLREAANRKMEQL
RQEYLEMKVLIDTSEANATRKIKEEEKRIVSKYDSIYQVLLKKKSEIQTLKEEIENSLLK
EDEFEFLEKASKLQMVATKPVYIPKVELDHELIKGVYEGTLELKNQLRQSLAQSQEKKPE
EPTSSDDSGDHGTHTTSKSSRTVKKAPQEKKAKKNVAATASPGPRVPRQSVELKSPPDDA
AKDTTSPNAMTIKTKVLETFLAKTRTQLLDYFVKVILDYNTAHYKVALTANYTTASVADV
PQMYRPHPQRFTYCSQVLGLHCYKKGIHYWEVELQKNNFCGVGICYGSMDRQGPESRLGR
NRASWCVEWFNNKISAWHDNTEKTLPPTKATRVGVLLNCDHGFVIFFAVLDKFHLMYKYV
VNFTEAVYPAFWVFSAGATLSICSPK
NT seq
1881 nt
NT seq
+upstream
nt +downstream
nt
atggcggagctcttcctgctgtcggaggagctgtcgtgctccatctgcttggaactcttc
aaggagccggtcaccaccccctgtggccacaacttctgccggtcgtgcctggacgagacg
tgggccgtccagggcaagccgtaccggtgcccacagtgccgcgccgactccccggcgctc
cccgagctgcggaagaacacggtgctgtgcgccgtggtggaccagtacctccaggccgag
ctggagcaggtgcccgccaccgactggacgccgccctcgcgttccgccgcccccggtccc
gctccgcaggtagcctgtgaccactgcctgaaggcagaagccgtgaagacttgcctggtg
tgcatggcctccttctgtcaggagcacttgcggccgcacctcgagagccctgccttccag
gaccacccgttgcagctgccggttcgaaacctgatgcgccgcaagtgttctcagcacaac
cgcctgcgagacttgttttgccccacacatggcgagtgtatctgccacatgtgcctggtg
gaccacaaggcctgctctccggtgtccgtgagccaagccagcaccgatctggagaacaaa
ctgaggcataaactaaccgtcatgtatggtcatgtcagtggggccacaagagcactggag
gacgtaagaaccaggcagcagagcttgcgggaggctgccaacaggaagatggagcagctg
agacaggaatacctggaaatgaaggttctcatcgatacctctgaggccaacgccacacgc
aagataaaggaagaagagaagaggatcgtcagcaaatatgactccatttaccaggttctc
ctcaagaagaaaagcgagatccagaccctgaaggaggagatagagaacagcctgctgaag
gaggacgagtttgagtttctcgagaaagcatcaaaactgcagatggtcgccacgaagcca
gtctacatccccaaggtggagctggaccacgagctgatcaagggtgtctacgaaggcacc
ttggagctcaaaaaccagctaaggcagtcgctggctcagtcccaggagaagaagcctgag
gagcccaccagctcagatgattccggagaccatggcacccacactacaagcaaatcctcg
cgcactgtgaagaaggctccacaagaaaagaaagccaagaaaaacgttgctgccactgcc
tcacctggccccagagtccctagacagtcagtggaattgaaatcacccccggatgatgca
gccaaagacaccacctcgccaaacgccatgactatcaagaccaaggtgctggaaaccttc
ttagccaagaccagaacccagctcttagactatttcgttaaagtcatcttggattacaac
accgctcattacaaagtggctctgacagcaaactacaccaccgcttccgtggcggacgtg
cctcagatgtaccggccgcatccgcagaggttcacgtactgctctcaggtgctgggcctg
cactgctacaagaaggggatccactactgggaggtggagctgcagaagaacaacttctgt
ggggtcggcatctgctacggcagcatggaccgccagggccccgagagccggctgggccgc
aacagagcctcctggtgtgtggagtggttcaacaacaagatctccgcctggcacgacaac
accgagaagacgctgccccccaccaaggccacgcgggtgggcgtgctcctcaactgtgac
cacggcttcgtcattttctttgccgtccttgataagttccacctgatgtacaaatacgtc
gtgaacttcaccgaggctgtgtaccccgccttctgggtgttctccgcgggcgccaccctc
tccatttgctccccgaagtag
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