Sciurus carolinensis (gray squirrel): 124978862
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Entry
124978862 CDS
T08117
Name
(RefSeq) AP-1 complex subunit beta-1 isoform X1
KO
K11825
AP-2 complex subunit beta-1
Organism
ncar
Sciurus carolinensis (gray squirrel)
Pathway
ncar04144
Endocytosis
ncar04721
Synaptic vesicle cycle
ncar04961
Endocrine and other factor-regulated calcium reabsorption
ncar05016
Huntington disease
Brite
KEGG Orthology (KO) [BR:
ncar00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
124978862
09150 Organismal Systems
09155 Excretory system
04961 Endocrine and other factor-regulated calcium reabsorption
124978862
09156 Nervous system
04721 Synaptic vesicle cycle
124978862
09160 Human Diseases
09164 Neurodegenerative disease
05016 Huntington disease
124978862
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ncar04131
]
124978862
Membrane trafficking [BR:
ncar04131
]
Endocytosis
Clathrin-mediated endocytosis
AP-2 complex
124978862
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Adaptin_N
Cnd1
B2-adapt-app_C
HEAT_2
Alpha_adaptinC2
HEAT
Arm
PDS5
Cnd3
HEAT_EZ
Arm_2
NELF-A_N
API5
TOR1L1_N
Motif
Other DBs
NCBI-GeneID:
124978862
NCBI-ProteinID:
XP_047398709
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All DBs
Position
3:complement(37660342..37772271)
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AA seq
951 aa
AA seq
DB search
MTDSKYFTTNKKGEIFELKAELNNEKKEKRKEAVKKVIAAMTVGKDVSSLFPDVVNCMQT
DNLELKKLVYLYLMNYAKSQPDMAIMAVNSFVKDCEDPNPLIRALAVRTMGCIRVDKITE
YLCEPLRKCLKDEDPYVRKTAAVCVAKLHDINAQMVEDQGFLDSLRDLIADSNPMVVANA
VAALSEISESHPNSNLLDLNPQNINKLLTALNECTEWGQIFILDCLSNYNPKDDREAQSI
CERVTPRLSHANSAVVLSAVKVLMKFLELLPKDSDYYNMLLKKLAPPLVTLLSGEPEVQY
VALRNINLIVQKRPEILKQEIKVFFVKYNDPIYVKLEKLDIMIRLASQANIAQVLAELKE
YATEVDVDFVRKAVRAIGRCAIKVEQSAERCVSTLLDLIQTKVNYVVQEAIVVIRDIFRK
YPNKYESIIATLCENLDSLDEPDARAAMIWIVGEYAERIDNADELLESFLEGFHDESTQV
QLTLLTAIVKLFLKKPSETQELVQQVLSLATQDSDNPDLRDRGYIYWRLLSTDPVTAKEV
VLSEKPLISEETDLIEPTLLDELICHIGSLASVYHKPPNAFVEGSHGIHRKHLPIHHGST
DAGDSPVGTTTAPNLEQPQVIPSQGDLLGDLLNLDLGPPVNVPQVSSMQMGAVDLLGGGL
DSLLGSDLGGGIGGSPAVGQSFIPSSVPATFAPSPTPAVVSSGLNDLFELSTGIGMAPGG
YVAPKAVWLPAVKAKGLEISGTFTHRQGHIYMEMNFTNKALQHMTDFAIQFNKNSFGVIP
STPLAIHTPLMPNQSIDVSLPLNTLGPVMKMEPLNNLQVAVKNNIDVFYFSCLIPLNVLF
VEDGKMERQVFLATWKDIPNENELQFQIKECHLNADTVSSKLQNNNVYTIAKRNVEGQDM
LYQSLKLTNGIWILAELRIQPGNPNYTLSLKCRAPEVSQYIYQVYDSILKN
NT seq
2856 nt
NT seq
+upstream
nt +downstream
nt
atgactgactccaagtactttacaactaataaaaagggagaaatctttgaattaaaagct
gaactcaacaatgaaaagaaagaaaagaggaaggaggctgtgaagaaagtgattgctgct
atgactgtggggaaggatgttagctctctctttccagatgtagtgaactgtatgcagacc
gacaatctggaactgaagaaactcgtatatctctacttgatgaactatgccaagagtcag
ccagacatggccatcatggctgtcaacagctttgtgaaggactgtgaagatcccaatcct
ttgattcgggccttggcagttaggaccatggggtgcatccgggtggacaaaattacagaa
tatctctgtgagcccctgcgcaagtgcttgaaggacgaagacccctatgttcggaaaaca
gcagcagtctgtgtggcaaaactccatgatatcaatgcccaaatggtggaagatcaggga
tttctggattctctacgggatctcatagcagattcaaatcctatggtggtggctaatgct
gtggcagcattatctgaaatcagtgagtctcacccaaacagcaacttacttgatctgaac
ccacagaacattaataagctgctgacagctctgaatgagtgcacagaatggggccagatt
ttcatcctggactgcctgtctaattacaaccccaaagatgaccgggaagctcagagcatc
tgtgagcgggtaaccccccggctgtcccatgccaactcagcagtggtgctttcagcggtg
aaagtcctaatgaagtttctagagttgttacccaaggactctgactactataatatgcta
ctgaagaagttagctcctccacttgtcactttgctgtctggggagccagaagtgcagtat
gtcgccctgaggaacatcaacctaattgtccagaaaaggcctgaaatcttgaagcaggaa
ataaaagtcttctttgtgaagtataatgatcccatctatgttaaactagagaaattggac
atcatgattcgtctggcatcccaagccaacattgctcaggttctggcagaactgaaagaa
tatgccactgaggtggatgtggactttgttcgcaaagctgtccgggccattggacgatgt
gccatcaaggtggagcaatctgccgagcgctgcgtaagcacattgcttgatctaatccag
accaaagtaaattatgtggtccaagaggcgattgttgtcataagggacatcttccgcaaa
taccccaacaagtatgaaagtatcattgccactctctgtgaaaacttagactcactggat
gagccagatgctcgagcagctatgatatggattgtgggagaatatgctgaaagaattgac
aatgcagatgagttactagagagctttctggagggttttcatgatgaaagtacccaagtg
caactcactctgcttactgccatagtgaagctgtttctcaagaaaccatcagaaacacag
gagttagtccaacaggtcttgagtttggcaacacaggattctgataatcctgaccttcga
gatcggggctatatttattggcgccttctctcaactgatcctgtgacagccaaagaagta
gtcttatctgagaagccactaatctctgaggaaacagaccttattgagccaactctgctg
gatgaactaatctgccacattggttctttggcctctgtgtaccataaacctcccaatgct
tttgtggaggggagtcatgggatccatcgcaagcatttgccaattcatcatggcagcact
gatgcaggtgacagccctgttggcaccaccactgcacccaacctggaacagcctcaggtt
atcccttctcaaggagaccttctaggggatcttttaaatcttgaccttggtcccccagtc
aatgtgccacaggtgtcctccatgcagatgggagcagtggatctcctgggaggaggactt
gatagtctgcttggcagtgaccttggcgggggcattggaggaagtccggcagtaggacag
tccttcatcccatcatcagtgcctgccacctttgctccttcacctactcctgcagtggtc
agcagtggactaaatgacctgtttgaactctccacaggaataggcatggcacctggtgga
tatgtggctcctaaggctgtctggctacctgcggtaaaggctaaaggtttggagatttcg
ggaacatttactcaccgccaagggcacatctatatggaaatgaactttaccaacaaagct
ctgcaacacatgacagactttgcaatccagtttaacaagaatagctttggtgtcatccca
agcactcctctggccatccatacaccactgatgccaaaccagagcattgatgtctccttg
cctctcaacaccttgggcccagtcatgaagatggaacctctgaataacctgcaggtggct
gttaaaaacaatattgatgtcttctacttcagctgcctcatcccactcaatgtgcttttt
gtagaagatggcaaaatggaacgccaggtcttccttgctacgtggaaggatattcccaat
gaaaatgaactccagtttcagataaaggaatgccatttaaatgctgacactgtttccagc
aagttgcaaaacaacaatgtttatactattgccaagaggaatgtggaagggcaggacatg
ctataccaatccctgaaactcactaatggcatttggattttggctgagctacgcatccag
ccaggaaaccccaattatacgctgtcactgaagtgtagagctcctgaagtctctcaatac
atctatcaggtctacgacagcattttgaaaaactaa
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