Sciurus carolinensis (gray squirrel): 124978931
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Entry
124978931 CDS
T08117
Name
(RefSeq) E3 ubiquitin-protein ligase RNFT1 isoform X1
KO
K22379
E3 ubiquitin-protein ligase RNFT1 [EC:
2.3.2.27
]
Organism
ncar
Sciurus carolinensis (gray squirrel)
Brite
KEGG Orthology (KO) [BR:
ncar00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
ncar04121
]
124978931
Enzymes [BR:
ncar01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
124978931
Ubiquitin system [BR:
ncar04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
124978931
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-RING_2
zf-C3HC4_3
zf-RING_UBOX
zf-C3HC4
zf-C3HC4_2
zf-RING_5
zf-rbx1
Prok-RING_4
zf-C3HC4_4
zf-RING_6
zf-RING_16
zf-ANAPC11
Motif
Other DBs
NCBI-GeneID:
124978931
NCBI-ProteinID:
XP_047398830
LinkDB
All DBs
Position
3:complement(34379081..34390744)
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AA seq
398 aa
AA seq
DB search
MQANRNQLHSPPGTASGEDASASQCTHTRLTGEGSCLHSGDVHIQINPIPKEYAENPSSR
NIRSSVHSCTHGCAHSRFRSHSHSEARQPEETTTESGEHGSSSFSEFRYLFKWLQKSLPY
ILILGVKLVMQHITGISLGIGLLTTFMYANKSIVNQVFLRERSSKIQCAWLLVFLAGSSV
LLYYTFHSQSLYYSLIFLNPTLDHLSFWEVLWIVGITDFVLKFLFMGLKCLVLLVPPFIM
PFKSKGYWYMLLEELCQYYRTFVPIPVWFRYLISYGEFGNATRWSLGILLALLYLILKLL
DFFGHLKTFRQVLRIFFTRPSYGVAASKRQCSDVDDICSICQAEFQKPILLICQHIFCEE
CITLWFNREKTCPLCRTVISDRVNKWNDGATSSHLQIY
NT seq
1197 nt
NT seq
+upstream
nt +downstream
nt
atgcaagccaaccgtaaccaactacacagtcctccaggaactgcaagtggtgaggatgcc
tcagcctcccagtgtacccatacaagactgacaggagaaggttcttgtcttcattctgga
gatgttcatatccagattaaccccatacctaaagaatatgctgaaaatccaagctccaga
aatataaggtcaagtgtccatagctgtacccatgggtgtgcacatagtcgtttccggagt
cactcccacagtgaagcaaggcagcctgaggagactaccacagagtctggggaacatgga
agtagctccttctcagaattccgctatcttttcaaatggctgcagaaaagtcttccatat
attttgattctgggtgtcaaacttgttatgcagcatataacaggcatttctcttggaatt
gggctgctaacaacttttatgtatgcaaacaaaagcattgtaaatcaggtttttctaaga
gaaagatcgtcaaagattcaatgtgcttggttattggtattcttagcaggatcatctgtt
cttttgtattatacctttcattctcagtcactttattacagcttaattttcttaaatcct
acactggatcacttgagcttctgggaagtactttggattgttggaattacagacttcgtt
ctgaaattcctcttcatgggcttaaaatgccttgttttattggtgcctcctttcatcatg
ccttttaaatcaaagggttactggtatatgcttttagaagaactgtgtcagtattaccga
acttttgttcccataccagtttggtttcgttaccttataagctatggggagttcggtaat
gcaactagatggagtcttgggatattgctggctttactctacctcatactaaaacttttg
gacttctttggacatctgaaaactttcaggcaggttttacgaatattttttacacgacca
agttacggcgtggctgccagcaagagacagtgttcagatgtggatgatatttgttcaata
tgtcaagctgaatttcagaagccaattcttcttatctgtcagcatatattttgtgaagag
tgcattaccttatggttcaacagagagaaaacatgtccactttgcagaactgtgatttca
gatcgtgtaaacaaatggaatgatggagccacttcatcacaccttcaaatatattaa
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