Sciurus carolinensis (gray squirrel): 124979069
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Entry
124979069 CDS
T08117
Name
(RefSeq) protein CASC3
KO
K14323
protein CASC3
Organism
ncar
Sciurus carolinensis (gray squirrel)
Pathway
ncar03013
Nucleocytoplasmic transport
ncar03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
ncar00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
124979069
03015 mRNA surveillance pathway
124979069
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ncar03019
]
124979069
Messenger RNA biogenesis [BR:
ncar03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
EJC complex
124979069
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Btz
Motif
Other DBs
NCBI-GeneID:
124979069
NCBI-ProteinID:
XP_047399213
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Position
3:complement(22281365..22303337)
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AA seq
703 aa
AA seq
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MADRRRQRASQDTEDEESGASGSDSGGSLARGGGSCSGSAGGGGSGSLPSQRGGRGGALH
LRRVESGGAKSAEESECESEDGMEGDAVLSDYESAEDSEAEEGEYSEEENSKVELKSEGN
DAANSSAKEEKGEEKPDTKGTVTGERQSGDGQESTEPVENKVGKKGPKHLDDDEDRKNPA
YIPRKGLFFEHDLRGQTQEEEIRPKGRQRKLWKDEGRWEHDKFREDEQAPKSRQELIALY
GYDIRSAHNPDDIKPRRIRKPRFGSPPQRDPNWIGERLNKPHRHQGPGGTLPPRTFINRN
AAGTGRMSAPRNYSRSGGFKEGRTGFRPMEAGGQHGGRSGETVKHETSYRSRRLEQTSVR
DPSPEADVPVLGSPEKEEAVVETPAVAPDTAPPAPDRPIEKKSYSRARRTRTKVGDAVKT
AEEVPPPPEGLTSAPPVSETTPPPSTKTGNWEASVDSATGGLEQDVAQLNIAEQNWSPGQ
PSFLQPRELRGVPNHIHMGAGPPPQFNRMEEMGVQGGRAKRYSSQRQRPVPEPPAPPVHI
SIMEGHYYDPLQFQGPIYTHGDSPAPLPPQGMIVQPEMHLPHPGLHPHQTPAPLPNPGLY
PPPVSMSPGQPPPQQLLAPTYFSAPGVMNFGNPSYPYAPGALPPPPPPHLYPNTQAPSQV
YGGVTYYNPAQQQVQPKPSPPRRTPQPVTIKPPPPEVVSRGSS
NT seq
2112 nt
NT seq
+upstream
nt +downstream
nt
atggcggaccggcggcggcagcgcgcttcgcaggatacggaagacgaagaatctggtgct
tcgggctccgacagtggcggctccctcgcgcggggcggcgggagctgcagtgggagcgct
ggaggcggcggcagcggctctctgccttcccagcgcggtggccgcggcggggccctccat
ctgcggcgggtggagagcgggggcgccaagagcgctgaggagtctgagtgtgagagtgaa
gatggcatggaaggtgatgctgttctctcggactatgaaagtgcagaagactcagaagct
gaagaaggggaatacagtgaagaggaaaactccaaagtggaactgaaatcagagggtaat
gatgctgctaattcttcagcaaaagaagagaagggagaagaaaagcctgacaccaaaggc
accgtgactggtgagaggcagagtggggatggacaggagagcacagagcctgtggagaac
aaagtgggtaaaaagggccctaagcatttggatgatgatgaagatcggaagaatccagca
tacataccccggaaggggcttttttttgagcatgatcttcgaggtcaaactcaggaggaa
gaaatcagacccaaggggcgacagcgaaagctatggaaggatgagggtcgttgggagcat
gacaagttccgcgaagatgagcaggctcccaagtcccgacaggagcttattgctctttat
ggctatgatatccgctcagctcacaatcctgatgacatcaaaccccgaagaattcggaaa
ccccgatttgggagtcctccacaaagagatccaaactggattggtgagcgtctaaacaag
ccccatcgccaccagggtcctgggggtaccctaccaccaaggacatttattaacaggaat
gcagcaggtactggccgcatgtctgcacccaggaattactctcgatctgggggcttcaag
gaaggtcgtactggttttagacctatggaggctggtgggcagcatggtggccggtctggt
gagactgttaagcatgagactagttaccggtcacggcgcctggagcagacttctgtgagg
gatccatccccagaagcagatgttccagtgctcggcagtcctgagaaagaagaagcagtt
gtagagacaccagctgttgctcctgacactgcaccaccagcccctgacaggcctattgag
aagaaatcttactcccgggcgagaagaacccgaaccaaagttggagatgcagtcaaaact
gctgaggaggtgccccctccacctgaagggctgacctcagcacctccggtctcagaaacc
acccctcctccatctactaagactgggaactgggaggcttcagtagattctgctacaggt
ggacttgagcaagatgtggcacaactaaatatagcagaacagaattggagtccaggacaa
ccttcattcctacaaccacgggagcttcgaggtgtgccgaaccacatacacatgggagca
ggacctccacctcagtttaaccggatggaagaaatgggtgtccagggtggtcgagccaaa
cgctattcatctcagcggcagagacctgtgccagagcctcctgcccctcctgtgcacatc
agtatcatggagggacattactatgatccactgcagttccagggaccaatctatacccat
ggtgacagtcctgcaccactgcccccacagggcatgattgtacagccggaaatgcacctt
ccccacccaggtttacatccccaccagacaccggcacctctgcccaatccaggcctctac
ccaccaccagtgtccatgtctccgggacagccaccaccccagcagttgcttgctcctact
tacttttctgctccaggagtcatgaactttggtaatcccagttacccttatgctccagga
gcactgcctcccccaccacctcctcatctatatcctaatacacaggcgccatcacaggta
tacggaggagtgacctactataaccctgcccagcagcaggtgcagccaaagccctcccca
ccccggaggactccccagccagtcaccatcaagccccctccacctgaggttgtaagcagg
ggttccagttaa
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