KEGG   Sciurus carolinensis (gray squirrel): 124979069
Entry
124979069         CDS       T08117                                 
Name
(RefSeq) protein CASC3
  KO
K14323  protein CASC3
Organism
ncar  Sciurus carolinensis (gray squirrel)
Pathway
ncar03013  Nucleocytoplasmic transport
ncar03015  mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:ncar00001]
 09120 Genetic Information Processing
  09122 Translation
   03013 Nucleocytoplasmic transport
    124979069
   03015 mRNA surveillance pathway
    124979069
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:ncar03019]
    124979069
Messenger RNA biogenesis [BR:ncar03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    EJC complex
     124979069
SSDB
Motif
Pfam: Btz
Other DBs
NCBI-GeneID: 124979069
NCBI-ProteinID: XP_047399213
LinkDB
Position
3:complement(22281365..22303337)
AA seq 703 aa
MADRRRQRASQDTEDEESGASGSDSGGSLARGGGSCSGSAGGGGSGSLPSQRGGRGGALH
LRRVESGGAKSAEESECESEDGMEGDAVLSDYESAEDSEAEEGEYSEEENSKVELKSEGN
DAANSSAKEEKGEEKPDTKGTVTGERQSGDGQESTEPVENKVGKKGPKHLDDDEDRKNPA
YIPRKGLFFEHDLRGQTQEEEIRPKGRQRKLWKDEGRWEHDKFREDEQAPKSRQELIALY
GYDIRSAHNPDDIKPRRIRKPRFGSPPQRDPNWIGERLNKPHRHQGPGGTLPPRTFINRN
AAGTGRMSAPRNYSRSGGFKEGRTGFRPMEAGGQHGGRSGETVKHETSYRSRRLEQTSVR
DPSPEADVPVLGSPEKEEAVVETPAVAPDTAPPAPDRPIEKKSYSRARRTRTKVGDAVKT
AEEVPPPPEGLTSAPPVSETTPPPSTKTGNWEASVDSATGGLEQDVAQLNIAEQNWSPGQ
PSFLQPRELRGVPNHIHMGAGPPPQFNRMEEMGVQGGRAKRYSSQRQRPVPEPPAPPVHI
SIMEGHYYDPLQFQGPIYTHGDSPAPLPPQGMIVQPEMHLPHPGLHPHQTPAPLPNPGLY
PPPVSMSPGQPPPQQLLAPTYFSAPGVMNFGNPSYPYAPGALPPPPPPHLYPNTQAPSQV
YGGVTYYNPAQQQVQPKPSPPRRTPQPVTIKPPPPEVVSRGSS
NT seq 2112 nt   +upstreamnt  +downstreamnt
atggcggaccggcggcggcagcgcgcttcgcaggatacggaagacgaagaatctggtgct
tcgggctccgacagtggcggctccctcgcgcggggcggcgggagctgcagtgggagcgct
ggaggcggcggcagcggctctctgccttcccagcgcggtggccgcggcggggccctccat
ctgcggcgggtggagagcgggggcgccaagagcgctgaggagtctgagtgtgagagtgaa
gatggcatggaaggtgatgctgttctctcggactatgaaagtgcagaagactcagaagct
gaagaaggggaatacagtgaagaggaaaactccaaagtggaactgaaatcagagggtaat
gatgctgctaattcttcagcaaaagaagagaagggagaagaaaagcctgacaccaaaggc
accgtgactggtgagaggcagagtggggatggacaggagagcacagagcctgtggagaac
aaagtgggtaaaaagggccctaagcatttggatgatgatgaagatcggaagaatccagca
tacataccccggaaggggcttttttttgagcatgatcttcgaggtcaaactcaggaggaa
gaaatcagacccaaggggcgacagcgaaagctatggaaggatgagggtcgttgggagcat
gacaagttccgcgaagatgagcaggctcccaagtcccgacaggagcttattgctctttat
ggctatgatatccgctcagctcacaatcctgatgacatcaaaccccgaagaattcggaaa
ccccgatttgggagtcctccacaaagagatccaaactggattggtgagcgtctaaacaag
ccccatcgccaccagggtcctgggggtaccctaccaccaaggacatttattaacaggaat
gcagcaggtactggccgcatgtctgcacccaggaattactctcgatctgggggcttcaag
gaaggtcgtactggttttagacctatggaggctggtgggcagcatggtggccggtctggt
gagactgttaagcatgagactagttaccggtcacggcgcctggagcagacttctgtgagg
gatccatccccagaagcagatgttccagtgctcggcagtcctgagaaagaagaagcagtt
gtagagacaccagctgttgctcctgacactgcaccaccagcccctgacaggcctattgag
aagaaatcttactcccgggcgagaagaacccgaaccaaagttggagatgcagtcaaaact
gctgaggaggtgccccctccacctgaagggctgacctcagcacctccggtctcagaaacc
acccctcctccatctactaagactgggaactgggaggcttcagtagattctgctacaggt
ggacttgagcaagatgtggcacaactaaatatagcagaacagaattggagtccaggacaa
ccttcattcctacaaccacgggagcttcgaggtgtgccgaaccacatacacatgggagca
ggacctccacctcagtttaaccggatggaagaaatgggtgtccagggtggtcgagccaaa
cgctattcatctcagcggcagagacctgtgccagagcctcctgcccctcctgtgcacatc
agtatcatggagggacattactatgatccactgcagttccagggaccaatctatacccat
ggtgacagtcctgcaccactgcccccacagggcatgattgtacagccggaaatgcacctt
ccccacccaggtttacatccccaccagacaccggcacctctgcccaatccaggcctctac
ccaccaccagtgtccatgtctccgggacagccaccaccccagcagttgcttgctcctact
tacttttctgctccaggagtcatgaactttggtaatcccagttacccttatgctccagga
gcactgcctcccccaccacctcctcatctatatcctaatacacaggcgccatcacaggta
tacggaggagtgacctactataaccctgcccagcagcaggtgcagccaaagccctcccca
ccccggaggactccccagccagtcaccatcaagccccctccacctgaggttgtaagcagg
ggttccagttaa

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