Sciurus carolinensis (gray squirrel): 124979072
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Entry
124979072 CDS
T08117
Name
(RefSeq) rabankyrin-5 isoform X1
KO
K20129
rabankyrin-5
Organism
ncar
Sciurus carolinensis (gray squirrel)
Brite
KEGG Orthology (KO) [BR:
ncar00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ncar04131
]
124979072
Membrane trafficking [BR:
ncar04131
]
Endocytosis
Rab GTPases and associated proteins
Rab associated proteins
124979072
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ank_2
Ank
Ank_3
Ank_4
Ank_5
FYVE
BTB
ANK_LRRK2
BACK
FYVE_CARP1-2
Motif
Other DBs
NCBI-GeneID:
124979072
NCBI-ProteinID:
XP_047399219
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All DBs
Position
3:56855499..56948914
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AA seq
1170 aa
AA seq
DB search
MAEEEVSKLEKHLMLLRQEYVKLQKKLAETEKRCTLLAAQANKESSSESFISRLLTIVAD
LYEQEQYSDLKIKVGGRHISAHKFVLAARSDSWSLANLSSTEELDLSDANPEVTMTMLRW
IYTDELEFREDDVFLTELMKLANRFQLQLLRERCEKGVMSLVNVRNCIRFYQTAEELNAS
TLMNYCAEIIASHWDDLRKEDFSSMSAQLLYKMIKSKTDYPLHKAIKVEREDVVFLYLIE
MDSQLPGKLNEVDHNGDLALDLALSRRLESIATTLVSHKADVDMVDKNGWSLLHKGIQRG
DLFASTFLIKNGALVNAATLGAQETPLHLVALYSSKKHSADVMSEMAQIAEALLQAGANP
NMQDSKGRTPLHLSITARNEYVFSQLLQCKQLDLELKDHEGSTALWLAVQYIIVSSDPSV
NPFEDLPVVNGTSFDENSFAARLIQRGSNTDAPDTMTGNCLLQRAAGAGNEAAALFLATN
GAHVNHKNKWGETPLHTACRHGLANLTAELLQQGANPNLQTEEALPLPKEVTPATSSMDN
VYLQTPLHMAIAYNHPDVVSVILEQKANALHATNNLQIIPDFSLKDSRDQTVLGLALWTG
MHTIAAQLLGSGASINDTMSDGQTLLHMAIQRQDSKSALFLLEHQADINVSRTQDGETAL
QLAIRNQLPLVVDAICTRGADMSVSDEKGNPPLWLALANNLEDIASTLVRHGCDATCWGP
GPSGCLQTLLHRAIDENNESTACFLIRSGCDVNSPRQPGADGEGEEEARDGQTPLHLAAS
WGLEETVQCLLEFGANVNAQDAEGRTPVHVAISNQHSVIIQLLISHPDIHLNVRDRQGLT
PFACAMTYKNNKAAEAILKRESGAAEQVDNKGRNFLHVAVQNSDIESVLFLISVQANVNS
RVQDASKLTPLHLAVQAGSEIIVRNLLLAGAKVNELTKHRQTALHLAAQQDLPTICSVLL
ENGVDFAAVDENGNNALHLAVMHGRLNNIRVLLTECTVDAEAFNLRGQSPLHILGQYGKE
NAAAIFDLFLECMPEYPLDKPDAEGNTVLLLAYMKGNANLCRAIVRSGARLGVNNNQGVN
IFNYQVATKQLLFRLLDMLSKEPPWCDGSNCYECTAKFGVTTRKHHCRHCGRLLCHKCST
KEIPIIKFDLNKPVRVCNICFDVLTLGGVS
NT seq
3513 nt
NT seq
+upstream
nt +downstream
nt
atggcggaagaggaggtgtccaagttggagaagcacttgatgcttctccgacaagagtat
gtcaagctgcagaagaaattggcagagacagagaagagatgcactcttttggctgcgcaa
gcaaataaggaaagcagcagtgagtccttcatcagccgattgctaacaatagtggcagac
ctctatgagcaggagcagtacagtgatctgaagataaaggttggaggcaggcacatcagt
gcccacaagtttgtcctggcagcccgtagtgacagctggagtttggccaacttgtcttcc
actgaggaactggacctgtcagatgctaatcctgaagtgacaatgacaatgcttcgctgg
atctacacagatgagctggagttcagagaggatgatgtgttcctgactgaattgatgaaa
ctagcgaatcggtttcagctacagctccttagggagagatgtgaaaagggtgtgatgtcc
ctggtgaatgttaggaactgtattcgcttctatcagactgcagaggaactgaatgccagc
acactgatgaactactgtgcagagattattgcaagtcattgggatgacttacgaaaggag
gactttagcagtatgagtgctcagttgttatacaaaatgatcaaatccaagacggactac
ccattacataaagctatcaaagtggagagagaagatgtggtcttcctttatctgattgaa
atggattcacagctccctgggaaactgaatgaagtggatcataatggagatcttgcatta
gatctagccctttcacgacgactagagagtattgccaccacgctggttagccataaagct
gatgtggacatggtagacaagaatggctggagcttgttacataaaggaatccaaagagga
gatctctttgcttctactttccttattaagaatggggcccttgttaatgctgctacattg
ggtgcccaagagacaccattgcaccttgtggcattgtacagttcaaagaaacactcagca
gatgtgatgtctgagatggcgcagattgcagaggccctcctacaggctggtgccaacccc
aacatgcaggatagcaagggcaggactcctttacacctatccatcaccgccaggaatgaa
tatgtgttcagtcagctgctgcagtgtaaacagttagatttagaactaaaagaccatgaa
ggcagcacagctttgtggctggcagtacagtacatcattgtatcttcggacccatctgta
aacccctttgaagacctccctgtggtaaatgggacttcatttgatgaaaacagctttgca
gccagactcattcagcgtggtagcaacactgatgcacctgataccatgacaggaaattgt
ttactacagcgggcagctggagcaggaaatgaggcagcagctcttttcctggcaaccaat
ggtgcccatgtcaaccacaaaaacaagtggggagaaaccccgttgcacacagcttgccgg
catggcctagccaacctcacagcggagctcctgcagcaaggtgccaacccaaacctgcag
acagaggaggctctgcctttgccaaaggaggtcacacctgcaaccagctccatggacaat
gtctatctgcagacaccactgcacatggcaattgcctataatcatccagatgtggtatct
gtcatcctagagcagaaagccaatgctcttcatgccaccaacaacttgcaaattattccg
gactttagcctcaaggattcccgagaccagactgtgctgggcctggcattgtggactggc
atgcacaccattgcagcccagctgctgggttccggggcttccatcaatgacaccatgtca
gatgggcaaactttgttgcacatggccatacagcggcaggatagcaagagtgcacttttt
ctcctggagcatcaggcagatataaatgtcagcaggactcaggatggggagacagccctt
cagctggccatcagaaatcagcttccactggtagttgatgccatatgtacccgaggagct
gacatgtctgtttcagatgagaaagggaaccccccactgtggcttgcattggcaaataat
ctggaagacatcgcatccactctggttagacatggttgtgatgccacatgctggggtcca
ggacctagtgggtgcctccagacacttctgcacagagctattgatgaaaataatgagtcc
actgcctgcttccttattcgcagtggctgtgatgtgaatagtcccagacagcccggtgct
gatggagaaggagaggaagaagccagagatgggcagactcccctgcatttggcagcctcg
tggggactggaagagactgtgcagtgtcttctggagtttggtgccaatgtaaatgcacag
gatgcagaaggcagaacacctgtccatgtggccatcagcaaccaacacagtgtcatcatt
cagttgttgatttctcaccctgatatccacttgaatgtacgagacaggcaagggctgacc
ccatttgcctgtgccatgacttacaagaacaataaggcagctgaggcgattctaaaacga
gagtctggagctgctgaacaggtggataacaagggccgaaattttcttcacgtggcagtt
cagaactctgatattgaaagtgtcctgttcttgatcagtgtccaggctaatgtgaattcc
agagtccaggatgcttccaagttgactcctttgcatcttgctgtccaagcaggctcagag
attattgtccgcaatttgcttcttgcaggagccaaggtgaatgaattaacaaagcaccgc
caaactgccctccatcttgctgctcagcaggacctacctaccatctgctcagtcctccta
gagaatggagtggactttgctgctgtggatgagaatggaaataatgctcttcatcttgct
gtcatgcatggtcggctcaacaacatccgggttctcctgacagagtgcacagtagatgcc
gaagcctttaatctgagaggccagtcaccactgcacattttgggacaatatggcaaagaa
aatgcagcagccatctttgatctcttcttagagtgtatgcctgagtatcctttagataaa
ccagatgcagaaggaaacacagtgctgctcttagcatacatgaaagggaatgccaatttg
tgccgagccatcgtccgatctggggctcgtcttggggtgaataataaccaaggtgtcaat
attttcaactaccaggttgccaccaagcaacttctgtttagactattagacatgctgtcc
aaggaacctccatggtgtgatggctccaactgctatgagtgcactgccaagtttggagtc
acaactcgcaagcatcattgtcggcactgcggacgtcttctttgccataaatgttctacc
aaggaaattcctattataaagtttgatctgaacaagcctgtgcgagtctgcaacatttgc
tttgatgtactgacactaggtggagtctcttag
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