Sciurus carolinensis (gray squirrel): 124979077
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Entry
124979077 CDS
T08117
Name
(RefSeq) glial fibrillary acidic protein isoform X1
KO
K05640
glial fibrillary acidic protein
Organism
ncar
Sciurus carolinensis (gray squirrel)
Pathway
ncar04630
JAK-STAT signaling pathway
Brite
KEGG Orthology (KO) [BR:
ncar00001
]
09130 Environmental Information Processing
09132 Signal transduction
04630 JAK-STAT signaling pathway
124979077
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ncar04131
]
124979077
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
ncar04812
]
124979077
Membrane trafficking [BR:
ncar04131
]
Autophagy
Chaperone mediated autophagy (CMA)
Other CMA associated proteins
124979077
Cytoskeleton proteins [BR:
ncar04812
]
Eukaryotic cytoskeleton proteins
Intermediate filaments
Intermediate filaments
Type III
124979077
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Filament
Filament_head
DUF1664
Motif
Other DBs
NCBI-GeneID:
124979077
NCBI-ProteinID:
XP_047399231
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All DBs
Position
3:18256087..18265186
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AA seq
470 aa
AA seq
DB search
MERRRITSARRSYTSSEMLIRGLGPGHHLGPGSRFSLARMHPPIPARVDFSLAGALNAGF
KETRASERAEMMELNDRFASYIEKVRFLEQQNKALAAELNQLRAKEPTKLADVYQAELRE
LRLRLDQLTANSARLEVERDNLAQDLGTLRQKLQDETNLRLEAENNLAAYRQEADEAALA
RLDLERKVESLEEEIRFLRKIHEEEVRELQEQLARQQVHVEMDVAKPDLTAALREIRTQY
EAVASSNMQEAEEWYRSKFADLNDAAARNAELLRQAKHEANDYRRQLQALTCDLESLRGT
NESLERQMREQEERHAREAASYQETLARLEEEGQSLKDEMARHLQEYQDLLNVKLALDIE
IATYRKLLEGEENRITIPVQTFSNLQIRGGKSTKEGEGHKVTRHLKRLTIQVIPIQAHQI
VNGAPSALETSLDTKSVSEGHLKRNIVVKTVEMRDGEVIKESKQEHKDVM
NT seq
1413 nt
NT seq
+upstream
nt +downstream
nt
atggagcggagacgcatcacttctgctcgccgctcctacacctcctccgagatgttgatt
cggggcctgggtcccggccaccacctaggtcctggctcccgcttctccctggctcgaatg
caccctccaatccctgcccgggtggacttctctttggccggggccctcaatgccggcttc
aaggagacccgggccagtgagcgggcagagatgatggagctcaatgaccgctttgccagc
tacatcgagaaggtccgcttcctggaacagcaaaacaaggcactggctgctgagctaaac
cagctgcgggccaaggagcccacgaagctggctgatgtctaccaagctgagctgcgggag
ctgaggctgcggcttgatcagctcactgccaacagtgcccggcttgaggtcgagagggac
aatctggcacaggacctgggcaccctgaggcagaagctccaggatgaaaccaacctgagg
ctggaggctgagaacaacctggctgcctatagacaggaggcagatgaagccgccctagcc
cgtctggatctggaaaggaaggttgagtcactggaggaagagatccggttcttgaggaag
atccatgaggaggaggtgcgggaactccaggaacagctggcccgacagcaggtccacgtg
gagatggatgtggccaagccagacctcacagcagccctgagagagatccgcacgcagtac
gaggcagtggcgtccagcaacatgcaggaggcagaggagtggtaccggtccaagtttgct
gacctcaatgacgctgccgcccgcaacgcagagctgctccgccaggccaagcacgaggcc
aatgactaccggcgccagctgcaggccttgacctgcgacctggagtccttgcgcggcacg
aacgagtccctggagagacagatgcgtgagcaggaggagcgccacgcgcgggaggcggcg
agttaccaggagacgctggcccgtctggaggaagagggacagagcctcaaggacgagatg
gcccgccacctgcaggagtaccaggacctgctaaacgtcaagctggccctggacatcgag
atcgccacctacaggaagctactggagggcgaggagaaccgcatcaccattcctgtgcag
accttctccaacctgcagatccgagggggcaaaagcaccaaagaaggggaaggtcacaag
gtcacaagacatctcaaaaggctcacaatacaagttataccaatacaggctcaccagatt
gtaaatggagccccgtcggctctcgaaaccagcctggacaccaagtccgtgtcagaaggc
cacctcaagaggaacattgtggtgaagactgtggagatgcgggatggagaggtcattaag
gagtccaagcaggaacacaaggatgtgatgtga
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integrated database retrieval system
