Sciurus carolinensis (gray squirrel): 124979102
Help
Entry
124979102 CDS
T08117
Name
(RefSeq) GRB10-interacting GYF protein 2 isoform X1
KO
K18730
PERQ amino acid-rich with GYF domain-containing protein
Organism
ncar
Sciurus carolinensis (gray squirrel)
Brite
KEGG Orthology (KO) [BR:
ncar00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ncar03019
]
124979102
Messenger RNA biogenesis [BR:
ncar03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
eIF4F and regulatory proteins
124979102
Surveillance factors
Other surveillance factors
124979102
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
GYF
GYF_2
TRI4_N
Motif
Other DBs
NCBI-GeneID:
124979102
NCBI-ProteinID:
XP_047399295
LinkDB
All DBs
Position
3:176297899..176418323
Genome browser
AA seq
1349 aa
AA seq
DB search
MKEPKNSWLHEECEPEIGMYSGTKVSSHIKLFVKIRRRMAAETQTLNFGPEWLRALSSGG
SITSPPLSPALPKYKLADYRYGREEMLALFLKDNKIPSDLLDKEFLPILQEEPLPPLALV
PFTEEEQRNFSMSVNSAAVLRLTGRGGGGTVVGAPRGRSSSRGRGRGRGECGFYQRSFDE
VEGVFGRGGGREMHRSQSWEERGDRRFEKPGRKDVGRPNFEESGPTSVGRKHEFIRSESE
NWRIFREEQNGEDEDGGWRLAGPRRDGERWRPHSPDGPRSAGWREHMERRRRFEFDFRDR
DDERGYRRVRSGSGSIDDDRDSLPEWCLEDAEEEMGTFDSSGAFLSLKKVQKEPIPEEQE
MDFRPVEEGEECSDSEGSPNEEAKEPDKTNKKEGEKVDRVGLEASEETPQTSSSSARPGT
PSEHQSQETTPQFERKDESKTDQIEKAEEEIRTENSLPGKVPSRGDEMVPDIQQPLTQLP
PDPASPLLILPPPVTAPSPAPRPVEMPVVGAPGMGSVSTEPDDEEGLKHLEQQAEKMVAY
LQDSALDDERLASKLQEHRAKGVSIPLMHEAMQKWYYKDPQGEIQGPFNNQEMAEWFQAG
YFTMSLLVKRACDESFQPLGDIMKMWGRVPFSPGPAPPPHMGELDQERLTRQQELTALYQ
MQHLQYQQFLIQQQYAQVLNQQQKTTLPTQQQQQLALLLQQFQALKMRISDQSIIPSVTR
SVSVPDTGSIWELQPAASQPTVWEGGSVWDLPLETPTPGPALEQLQQLEKAKAAKLEQER
REAEMRAKREEEERKRQEELRRQQEEILRRQQEEERKRREEEELARRKQEEALRRQREQE
IALRRQREEEERQQQEEALRRLEERRREEEERRKQEELLRKQEEEAAKWAREEEEAQRRL
EENRLRMEEEAARLRHEEEERKRKELELQRQKELMRQRQQQQEALRRLQQQQQQQQLAQM
KLPSSSTWGQQSNTTACQSQATLSLAEIQKLEEERERQLREEQRRQQRELMKALQQQQQQ
QQQKLSGWGNVSKPAGTTKSLLEIQQEEARQMQKQQQQQQQQQHQQPNRARNNTHSNLHT
SIGNSVWGSINTGPPNQWASDLVSSIWSNADTKNSNMGFWDDAVKEVGPRNSTNKNKNNA
SLSKSVGVSNRQNKKVEEEEKLLKLFQGVNKAQDGFTQWCEQMLHALNTANNLDVPTFVS
FLKEVESPYEVHDYIRAYLGDTSEAKEFAKQFLERRAKQKVNQQRQQQQQQQQQQQQQQQ
QQQQQQQQQQQQQQPPPQDSVWGMNHSTLHSVFQTNQSNNQQSNFEAVQSGKKKKKQKMV
RADPSLLGFSVNASSERLNMGEIETLDDY
NT seq
4050 nt
NT seq
+upstream
nt +downstream
nt
atgaaagaacccaagaacagttggcttcatgaggaatgtgaaccagaaattgggatgtat
tcaggaaccaaggtttcttcccacataaaactctttgtaaaaatacggagaagaatggca
gcggagacgcagactctgaactttgggcctgaatggctccgagctctatccagtggtggg
agtattacatcccctcctctttctccagcattgccgaagtataaattagcagattatcgc
tatggcagagaagaaatgttagcactttttcttaaagacaacaagataccttcagacctt
ttggataaagaattcctgcctatcctacaggaggagcccctgccaccattggctctggta
ccctttacagaagaagaacagagaaacttttccatgtctgtaaatagtgctgctgtcctg
cgattgacaggacgaggaggaggaggaacagtggtgggggctcctagaggtcgaagttct
tcaagagggagaggtagaggtagaggtgaatgtggtttctaccaaagaagttttgatgaa
gtagagggtgtgttcggtcgaggaggtggcagggaaatgcatagatcacagagctgggag
gaaaggggtgacagacgttttgaaaaaccagggcgaaaagatgtagggagaccaaatttt
gaggaaagtggaccaacatcagtagggagaaagcatgaatttatacgatcagaaagtgaa
aattggcgtatctttagagaggaacaaaatggagaagatgaagatggaggttggcgacta
gctggaccaagaagagatggagagaggtggcgtcctcacagccctgatggccctcgttct
gcaggctggcgggaacacatggaacgtcgtcggaggtttgagtttgattttcgagatcgg
gatgatgaacggggttatcgaagggtgcgctctggcagtggaagcatagatgatgacagg
gatagtttacctgaatggtgcttagaggatgctgaagaagaaatgggcacgtttgactca
tctggagcattcctctctttaaaaaaagtacagaaagaacctattcctgaagagcaggag
atggacttccgacctgtggaagaaggggaggagtgctctgactctgagggtagccctaat
gaagaggccaaagaacctgataagaccaataagaaagagggagagaaagtagatagagta
ggacttgaagctagtgaggaaacaccccaaacttcatcatcatctgctagacccggtact
ccttcagaacatcagtctcaggaaacaacaccacagtttgagaggaaagatgaatccaaa
actgatcaaattgaaaaagctgaagaggagattcggacggaaaatagtctaccaggcaag
gtgcccagcagaggggatgaaatggttcctgacatccagcagcccctgacacagctccct
ccagacccagcctctcctctcctcatacttccacctcctgttactgctcccagtcctgcg
ccacggccagttgagatgccggttgttggtgctcctggtatgggcagtgtttctacagag
ccagatgatgaagagggtctcaaacacttggagcagcaagctgagaagatggtggcttat
ctccaggacagtgcactagatgatgagagactggcatcaaaactgcaggagcacagagct
aaaggagtgtcaattccattgatgcatgaagcaatgcagaagtggtactacaaagatcct
cagggagaaattcaaggtccctttaataatcaggagatggcagaatggtttcaggctggc
tactttactatgtctttgctggtgaagagagcatgtgatgaaagcttccaacctcttggt
gatattatgaagatgtggggaagagtgcccttctctccaggcccagctccccctcctcat
atgggggagttggaccaggaacgattgacaaggcagcaggaactcacagccttgtaccag
atgcagcacctccagtaccagcagttcttgatacaacaacaatatgcacaggttttgaat
caacaacagaaaacaaccttgccaacccagcaacagcagcagttggctcttcttctccaa
cagttccaggctctcaagatgaggatatctgatcagagcatcattccctcagtaactagg
tctgtgtcagtgccagatactggctctatctgggaacttcagccagcagcctcacagcct
acagtttgggaaggcggaagtgtatgggatcttcccctagaaaccccaacaccaggcccc
gccctggaacagcttcagcagctggagaaagccaaagctgcaaagctagagcaggagaga
agagaggcagaaatgagggcaaaacgggaagaggaggagcgaaagaggcaagaagagctc
cggagacaacaggaggaaattcttcggaggcagcaggaggaagagaggaaaaggcgggag
gaagaagagcttgcccgaaggaaacaggaagaggctctgcgacgccagagggagcaagaa
attgcattaaggcgacagcgagaagaggaagaaagacaacagcaagaagaagctcttaga
cgactggaggaaagaagaagagaagaggaagaaaggcggaagcaggaagaattgttacgc
aagcaggaagaggaggctgccaagtgggcccgggaagaagaagaagcccagcgtcgatta
gaggagaaccgactgcgaatggaagaggaggcagccagactccggcatgaggaggaagag
cggaagagaaaagagctggagctgcagcggcagaaggagctcatgcgccagaggcaacag
caacaagaggccctgcgcaggctgcagcagcagcagcagcagcagcagctggcgcagatg
aagctcccctcttcttcaacatggggccagcagtctaatacaacagcttgtcagtcccag
gccacactgtcattggctgaaattcaaaaacttgaagaggaacgagaacggcaacttcga
gaagagcaaaggcgtcagcaaagggaattgatgaaagctctccagcagcagcaacagcag
cagcagcagaaactctcaggttgggggaatgtcagcaaacctgcaggcaccacgaagtct
cttctggagatccagcaggaggaggccaggcagatgcagaagcagcagcagcagcagcag
caacagcagcaccagcaaccaaacagagcccggaataacacacattccaacctgcacacc
agcattgggaattctgtttggggctctataaatactggtcctcctaaccagtgggcatct
gacctagtcagtagtatctggagtaatgctgacactaaaaactccaacatgggattctgg
gatgatgcagtgaaagaggtgggacctaggaattcaacaaataaaaataaaaacaacgcc
agtctcagtaaatccgtaggtgtgtctaaccggcagaataagaaagtagaagaagaagaa
aagttgctgaagctctttcagggagtaaataaagcccaagatggatttacccagtggtgt
gaacagatgcttcatgcccttaatacggcaaataacttggatgttcccacatttgtttct
ttcctgaaagaagtagaatctccttatgaggtccatgattatatcagggcctatctagga
gatacttctgaggccaaggagtttgccaagcagttccttgagcgtcgtgccaaacaaaaa
gtcaaccagcaacgtcagcagcagcagcagcagcagcagcagcagcagcaacaacagcag
cagcagcaacagcagcagcagcagcaacagcaacagcaacagccaccaccacaggactct
gtgtgggggatgaaccacagtacactccattcagtatttcagaccaatcaaagcaacaac
caacaatccaattttgaggctgtgcaaagtggtaaaaagaagaaaaagcagaagatggtc
cgagcagatcccagtttattagggttttcagtcaatgcatcatctgaacgcctcaacatg
ggtgaaatcgagactctggatgactactga
DBGET
integrated database retrieval system
