Sciurus carolinensis (gray squirrel): 124979138
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Entry
124979138 CDS
T08117
Name
(RefSeq) acetylcholine receptor subunit epsilon isoform X1
KO
K04817
nicotinic acetylcholine receptor epsilon
Organism
ncar
Sciurus carolinensis (gray squirrel)
Pathway
ncar04080
Neuroactive ligand-receptor interaction
Brite
KEGG Orthology (KO) [BR:
ncar00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
124979138
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
ncar04040
]
124979138
Ion channels [BR:
ncar04040
]
Ligand-gated channels
Acetylcholine (nicotinic)
124979138
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Neur_chan_LBD
Neur_chan_memb
SDR-like
Motif
Other DBs
NCBI-GeneID:
124979138
NCBI-ProteinID:
XP_047399407
EnsemblRapid:
ENSSCRG00010003074
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All DBs
Position
3:complement(54374961..54388199)
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AA seq
493 aa
AA seq
DB search
MAGTLLGVLLLLGLVVRGEGKNEELNLYHHLLNNYDRECRPVKRPEDTVTITLKVTLTNL
ISLNEKEETLTTSVWIGIDWQDYRFNYSKDDFGGIEILRVPSELVWLPEIVLENNIDGQF
GVAYDANVLIYEGGYVSWLPPAIYRSTCAVEVTYFPFDWQNCSLIFRSQTYSAKEVEFVF
AVDEDGKTVNKIDIDTVAFTENGEWAIDFCPGLIRHYDSGSADSPGETDVIYSLIIRRKP
LFYVINIIVPCVLISGLVLLAYFLPAQAGGQKCTVSINVLLAQTVFLFLIAQKIPETSLS
VPLLGRYLIFVMVVATLIVMNCVIVLNVSLRTPTTHATSFRLRHVLLELLPRLLGSRQSP
EAPRATSTPRRASSVGILLRAEELILKKPRSELVFEGQRHRHGAWTAALCQSLGAAAPEI
RCCVDAVNFVAASTREQEATCEEVSDWVRMGKALDNICFWAALVLFSVGSSLIFLGGYFN
QVPDLPYPPCIQA
NT seq
1482 nt
NT seq
+upstream
nt +downstream
nt
atggcagggactctgcttggtgtcctactcctcttgggccttgttgtcagaggtgagggg
aaaaatgaggagctgaatctttaccaccatcttttaaacaactatgaccgagaatgtcga
ccagtgaagaggcctgaggacactgtcaccatcaccctcaaggtcaccctgaccaacctc
atctcactgaacgagaaggaggagacccttactaccagcgtctggattggaattgattgg
caggattaccgatttaactatagcaaggacgactttggaggcatagaaatcctgcgggtc
ccttcagaactcgtgtggttaccagagattgtgctggaaaacaatattgacggccagttc
ggggtggcctacgacgctaacgtgctcatctatgagggtggctacgtgagctggttgcct
ccagccatctaccgcagcacctgcgccgtggaggtcacctacttccccttcgattggcag
aattgctctctcattttccgctctcagacgtacagtgccaaagaggtggagttcgtcttt
gcagtggatgaagatggcaagaccgttaacaagatagatatcgacacggtggcctttact
gagaatggcgagtgggccatcgacttctgcccggggttgatccgccactacgacagtggc
tccgctgacagcccgggagaaactgacgtcatctactcgttaatcatccgccggaagcct
ctcttctatgtcattaacatcatcgtaccttgcgtgctcatctctggcctagtgctgctc
gcctactttctaccagcgcaggccggcggtcagaaatgcacggtttctatcaacgtcctg
ctcgcccagactgtcttcttgttcctaattgcccagaaaatcccagagacgtctctgagt
gtgccgctgctgggcaggtatcttattttcgtcatggtggttgccacgctcattgtcatg
aattgcgtcattgtgcttaacgtttctttgcgaacgcccaccactcatgccacgtccttc
aggctgcgccacgttttattggaattgctgccgcgtctcctgggctctcgccagtctcct
gaggctccccgggccacctccacgccaaggcgcgcatcgtcggttggcatattgctccgc
gcagaggagctgatcctgaaaaagccgcggagtgagctcgtgtttgaaggacagaggcac
cggcacggggcctggacggctgccctatgccagagcctgggcgctgcagccccggagatc
cgctgctgtgtggatgctgtgaactttgtggctgcaagtactagagagcaggaggccact
tgtgaggaggtgtccgactgggtgcgcatggggaaggcccttgacaacatctgtttctgg
gctgctctggtgctcttcagcgtgggttccagcctcatcttccttgggggctacttcaac
caagtgcctgatcttccctacccaccctgtatccaagcttga
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