Sciurus carolinensis (gray squirrel): 124979147
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Entry
124979147 CDS
T08117
Name
(RefSeq) E3 ubiquitin-protein ligase RNF115 isoform X1
KO
K11982
E3 ubiquitin-protein ligase RNF115/126 [EC:
2.3.2.27
]
Organism
ncar
Sciurus carolinensis (gray squirrel)
Brite
KEGG Orthology (KO) [BR:
ncar00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ncar04131
]
124979147
04121 Ubiquitin system [BR:
ncar04121
]
124979147
Enzymes [BR:
ncar01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
124979147
Membrane trafficking [BR:
ncar04131
]
Endosome - Lysosome transport
Rab GTPases and associated proteins
Rab associated proteins
124979147
Ubiquitin system [BR:
ncar04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
124979147
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
zf-RING_2
zf-RING_11
zf-C3HC4_2
zf-rbx1
zf-RING_UBOX
zf-C3HC4
Zn_ribbon_19
zf-C3HC4_3
zf-RING_5
zf-ANAPC11
DUF8608
HypA
zf-Nse
FAR1_N
DZR_2
Pcf11_C
C1_2
DUF7560
Rad50_zn_hook
zf-RING_16
Zn_ribbon_PaaD
Motif
Other DBs
NCBI-GeneID:
124979147
NCBI-ProteinID:
XP_047399450
LinkDB
All DBs
Position
1:100047168..100144666
Genome browser
AA seq
305 aa
AA seq
DB search
MAEASAAGADTGAAVAAHRFFCHFCKGEVSPKLPEYICPRCESGFIEEVTDDSSFLGGGS
SRIDNSTSTHFAELWDHLDHTMFFQDFRPFLSSNPLDQGNRANERSHQTHTDFWGPSRPP
RLPMTRRYRSQGSTRPDRSPAIEGIIQQIFAGFFANSAIPGTPLPLSWSGMLHSNPGDYA
WGQTGLDAIVTQLLGQLENTGPPPADKEKITSLPTVTVTQEQVDMGLECPVCKEDYTVEE
KVRQLPCNHFFHSSCIVPWLELHDTCPVCRKSLNGEDSTRQTQSSEASASNRFSSDSQLH
DRWTF
NT seq
918 nt
NT seq
+upstream
nt +downstream
nt
atggcggaggcttcggcggccggggcggacacgggcgccgctgtagccgcgcaccgattt
ttctgccacttttgcaaaggcgaggttagccccaaactaccggaatatatatgccccaga
tgtgaatcaggctttattgaagaagtgacagatgattccagttttttaggtggtggcagc
agccggatagacaatagcacatcaacacattttgcagagctctgggaccatttggatcac
acgatgtttttccaagattttagaccatttctaagtagcaatccactggaccaaggtaat
agagccaatgagaggagtcaccaaactcacactgatttctggggaccaagcaggcctcca
cggctgccaatgactcggagatacaggtctcaaggaagtactcgtcctgacagatctcca
gctattgaaggaataatacaacagatctttgcaggattctttgcaaattctgcaattcct
ggaaccccactccctctttcttggagcggaatgctgcactccaaccctggggactatgcc
tggggtcagacagggcttgatgccattgtaacccagcttttaggacaactggaaaacaca
ggacctccaccagctgacaaggaaaaaatcacatctcttccaacagtgacagtaactcag
gaacaagttgatatgggtttagaatgtccagtatgcaaagaagattacacagttgaagag
aaagtccgacagttaccctgcaatcatttctttcacagcagttgcattgtgccgtggtta
gaactgcatgacacatgtcctgtatgtaggaagagcttaaatggtgaggactctactcgg
caaacccagagctctgaggcctctgcaagcaacagatttagcagtgacagtcagctacac
gaccgatggactttctga
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