Sciurus carolinensis (gray squirrel): 124979198
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Entry
124979198 CDS
T08117
Name
(RefSeq) WD repeat and FYVE domain-containing protein 1 isoform X1
KO
K23299
WD repeat and FYVE domain-containing protein 1
Organism
ncar
Sciurus carolinensis (gray squirrel)
Brite
KEGG Orthology (KO) [BR:
ncar00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ncar04131
]
124979198
Membrane trafficking [BR:
ncar04131
]
Autophagy
Other autophagy associated proteins
Others
124979198
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Beta-prop_WDR3_1st
WD40
Beta-prop_WDR5
Beta-prop_THOC3
WD40_Prp19
Beta-prop_EML_2
WD40_CDC20-Fz
Beta-prop_WDR3_2nd
Beta-prop_WDR36-Utp21_2nd
WD40_WDHD1_1st
Beta-prop_WDR90_POC16_2nd
Beta-prop_TEP1_2nd
WDR55
FYVE
Beta-prop_WDR36-Utp21_1st
Beta-prop_CAF1B_HIR1
Beta-prop_EML
Beta-prop_TEP1_C
Beta-prop_IFT122_1st
EIF3I
WD40_MABP1-WDR62_2nd
WD40_Gbeta
WDR90_beta-prop_4th
Beta-prop_IFT140_1st
Beta-prop_RIG_2nd
Beta-prop_WDR75_1st
Beta-prop_WDR35_TULP_N
Beta-prop_EIPR1
Beta-prop_SPT8
Beta-prop_HPS5
Beta-prop_WDR41
Beta-prop_Aladin
Beta-prop_DCAF12
Beta-prop_VPS8
NBCH_WD40
WD40_RFWD3
Beta-prop_WDR19_1st
ELYS-bb
Barwin
Motif
Other DBs
NCBI-GeneID:
124979198
NCBI-ProteinID:
XP_047399589
LinkDB
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Position
3:complement(168919988..168965895)
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AA seq
410 aa
AA seq
DB search
MAAEIHSRPQSSRPVLLSKIEGHQDAVTAALLIPKEDGVITASEDRTIRVWLKRDSGQYW
PSIYHTMASPCSAMAYHHDSRRIFVGQDNGAVMEFHVSEDFNKMNFIKTYPAHQNRVSAI
IFSLAAEWVISTGHDKCVSWMCTRSGNMLGRHFFASWASCLQYDFDTQYAFVGDYSGQIT
LLKLEQSTCSVITTLKGHEGSVACLWWDPIQRLLFSGASDNSIIMWDIGGRKGRTLLLQG
HHDRVQSLCYLQLTRQLVSCSSDGGIAVWNMDVSREEAPQWLESDSCQKCEQPFFWNIKQ
MWDTKTLGLRQHHCRKCGQAVCGKCSSKRSSYPIMGFEFQVRVCDSCYDSIKDEDRTSLA
TFHEGKHNISHMSMDIARGLMVTCGTDRVVKIWDMTPVVGCSLATGFSPH
NT seq
1233 nt
NT seq
+upstream
nt +downstream
nt
atggcggccgagatccactccaggccgcagagcagccgccccgtgctgctgagcaagatc
gagggccaccaggacgccgtcacggccgcgctgctcatccccaaggaggacggcgtgatc
accgccagcgaggacagaaccattcgagtatggctgaaaagagacagtggccagtactgg
cccagcatttaccacacaatggcctccccttgttctgctatggcttaccatcatgatagc
agacggatattcgtgggccaggataatggagctgtaatggaatttcatgtttctgaagat
tttaataaaatgaactttatcaagacctacccagctcatcagaaccgggtgtctgccatc
atcttcagcttggccgcagagtgggtgatcagcactggccacgacaagtgtgtcagctgg
atgtgcacccggagtgggaacatgctggggcgacacttcttcgcttcctgggcttcgtgt
ttacaatatgactttgatactcagtatgcttttgttggtgattattctggacagatcacc
ctgctgaagcttgaacagagcacgtgttcagttatcacaaccctcaaaggacatgaaggg
agtgttgcttgcctctggtgggatcctattcaacggttactcttctcaggagcttctgac
aacagcatcatcatgtgggacattgggggcaggaaaggccggacgctcttgcttcagggc
catcatgacagggtgcagtcgctgtgttacctgcaactaacaaggcagctcgtctcctgt
tcctcggatggtggaattgcagtgtggaacatggatgttagcagagaagaggctcctcag
tggttggaaagtgattcctgtcagaaatgtgagcagccctttttctggaacataaagcag
atgtgggacaccaagacgctggggctgagacaacatcactgcaggaagtgtgggcaggcc
gtgtgtgggaagtgcagcagcaaacgctccagctaccccatcatgggttttgagttccag
gtccgcgtgtgtgattcgtgttatgactccatcaaagatgaagatcggacctccctagca
acctttcatgaaggcaagcataacatctcccacatgtccatggacattgctaggggactg
atggtgacctgtgggactgaccgtgtggtaaagatatgggacatgacgcctgtggtgggc
tgcagcctggcaactgggttttctccacactga
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