Sciurus carolinensis (gray squirrel): 124979207 Help Entry 124979207         CDS       T08117                                  Name (RefSeq) integrin alpha-V isoform X1   KO K06487   integrin alpha V Organism ncar  Sciurus carolinensis (gray squirrel) Pathway ncar04081   Hormone signaling ncar04145   Phagocytosis ncar04148   Efferocytosis ncar04151   PI3K-Akt signaling pathway ncar04510   Focal adhesion ncar04512   ECM-receptor interaction ncar04514   Cell adhesion molecule (CAM) interaction ncar04518   Integrin signaling ncar04810   Regulation of actin cytoskeleton ncar04820   Cytoskeleton in muscle cells ncar04919   Thyroid hormone signaling pathway ncar05163   Human cytomegalovirus infection ncar05165   Human papillomavirus infection ncar05200   Pathways in cancer ncar05205   Proteoglycans in cancer ncar05222   Small cell lung cancer ncar05410   Hypertrophic cardiomyopathy ncar05412   Arrhythmogenic right ventricular cardiomyopathy ncar05414   Dilated cardiomyopathy ncar05418   Fluid shear stress and atherosclerosis Brite KEGG Orthology (KO) [BR:ncar00001]  09130 Environmental Information Processing   09132 Signal transduction    04151 PI3K-Akt signaling pathway     124979207   09133 Signaling molecules and interaction    04081 Hormone signaling     124979207    04512 ECM-receptor interaction     124979207    04514 Cell adhesion molecule (CAM) interaction     124979207    04518 Integrin signaling     124979207  09140 Cellular Processes   09141 Transport and catabolism    04145 Phagocytosis     124979207    04148 Efferocytosis     124979207   09144 Cellular community - eukaryotes    04510 Focal adhesion     124979207   09142 Cell motility    04820 Cytoskeleton in muscle cells     124979207    04810 Regulation of actin cytoskeleton     124979207  09150 Organismal Systems   09152 Endocrine system    04919 Thyroid hormone signaling pathway     124979207  09160 Human Diseases   09161 Cancer: overview    05200 Pathways in cancer     124979207    05205 Proteoglycans in cancer     124979207   09162 Cancer: specific types    05222 Small cell lung cancer     124979207   09172 Infectious disease: viral    05163 Human cytomegalovirus infection     124979207    05165 Human papillomavirus infection     124979207   09166 Cardiovascular disease    05418 Fluid shear stress and atherosclerosis     124979207    05410 Hypertrophic cardiomyopathy     124979207    05412 Arrhythmogenic right ventricular cardiomyopathy     124979207    05414 Dilated cardiomyopathy     124979207  09180 Brite Hierarchies   09182 Protein families: genetic information processing    04131 Membrane trafficking [BR:ncar04131]     124979207   09183 Protein families: signaling and cellular processes    04147 Exosome [BR:ncar04147]     124979207    04515 Cell adhesion molecules [BR:ncar04515]     124979207    04090 CD molecules [BR:ncar04090]     124979207 Membrane trafficking [BR:ncar04131]  Endocytosis   Phagocytosis    Integrins (complement receptors)     124979207 Exosome [BR:ncar04147]  Exosomal proteins   Exosomal proteins of haemopoietic cells  (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)    124979207   Exosomal proteins of epithelial cells    124979207 Cell adhesion molecules [BR:ncar04515]  Integrins   Integrin alpha subunits    124979207 CD molecules [BR:ncar04090]  Proteins   124979207 SSDB OrthologParalogGFIT Motif Pfam:  Integrin_A_Ig_3 Integrin_A_Ig_1 Integrin_A_Ig_2 FG-GAP FG-GAP_3 Integrin_alpha ITGAX-like_Ig_3 LYRIC Motif Other DBs NCBI-GeneID:  124979207 NCBI-ProteinID:  XP_047399620 LinkDB All DBs Position 3:134991369..135073574 Genome browser AA seq 1048 aa AA seqDB search MASPVRRRLPLRPRRLLLLLSGLLVPLCGAFNLDVDSPAEYSGPEGSYFGFAVDFFVPSA SNRMFLLVGAPKANTTQPGIVEGGQVLKCDWSSSRRCQPIEFDATGNRDYAKDDPLEFKS HQWFGASVRSKQDKILACAPLYHWRTELKQEREPVGTCFLQDGTKTVEYAPCRSKNIDAD GQGFCQGGFSIDFTKADRVLLGGPGSFYWQGQLISDQVAEIVSKYDPNVYSIKYNNQLAT RTAQAIFDDSYLGYSVAVGDFNGDGIDDFVSGVPRAARTLGMVYIYDGKNMSSLHNFTGE QMAAYFGFSVAATDINGDDYADVFIGAPLFMDRGSDGKLQEVGQVTVSLQRASGEFQTTK LNGFEVFARFGSAIAPLGDLDQDGFNDIAIAAPYGGEDKKGIVYIFNGRSTGLNTVPSQI LEGQWASQNMPPSFGYSMKGATDIDKNGYPDLIVGAFGVDRAVLYRARPVITVNAGLEVY PSILNQDNKTCPLPGTALKVSCFNVRFCLKADGKGALPRKLNFQVELLLDKLKQKGAIRR ALFLHNRSPGHSKNMTISRGGQMQCEELIAYLRDESEFRDKLTPITIFMEYRLDYRTAAD ATGLRPILNQFTPANISRQAHILLDCGEDNVCKPKLEVSVDSDQKKIYIGDDNPLTLIVK AQNQGEGAYEAELIISMPPQADFIGVVRNSEALARLSCAFKTENQTRQVVCDLGNPMKAG TQLLAGLRFSVHQQSEMDTSVKFDLQIQSSNLFDKVSPVVSYRVDLAVLAAVEIRGVSSP DHIFLPIPNWEHKENPETEEDVGPVVQHIYELRNNGPSSFSKAMLNLQWPYKYNNNTLLY ILHYDIDGPMNCTSDMEINPLRIKISSLQTTEKNDTVAGQGDRNHLITKRDLALSEGDVH TLGCGIAQCLRIVCQVGRLDRGKSAILYVKSLLWTETFMNKENQNHSYSLKSSASFNVIE FPYKNLPIEDIFNSTLVTTNVTWGIQPAPMPVPVWVIILAVLAGLLLLAVLVFVMYRMGF FKRVRPPQEEQEREQLQPHENGEGNSET NT seq 3147 nt NT seq  +upstreamnt  +downstreamnt atggcttctccagtgcggcggcggctgccccttcgcccccgccgcctcctgctgcttctc tccggactcctggtgcctctctgcggcgccttcaacctagatgtggacagtcctgccgaa tactctggccccgagggaagttacttcggcttcgcagtggatttcttcgtgcccagcgcg tctaacaggatgtttcttctggtgggagctcccaaagcaaacactacccaacctgggatt gtagaaggagggcaagtcctcaaatgtgactggtcttctagccgccggtgccaaccaatt gaatttgatgcaacaggcaatagagattatgccaaggatgatccattggagtttaagtcc caccagtggtttggagcatctgtgaggtcaaaacaggataaaattttggcctgtgctccc ttgtaccactggaggactgagctgaaacaggagagagagccagttggaacttgcttcctt caagatggaacaaagactgttgagtatgctccatgcaggtcaaaaaatattgatgctgat ggacagggattttgtcaaggaggattcagcattgattttactaaagctgacagagttctt cttggtggtcctggtagtttttattggcaaggtcagctcatctcagatcaagttgcagaa atcgtatctaaatatgaccccaatgtttatagcattaagtataataatcaattagctact cgaactgcacaagcaatttttgatgacagttatttgggttactcagtggctgtcggagat ttcaatggtgatggcatagatgactttgtttcgggagttccaagagcagcaaggactctg ggcatggtgtatatttatgatgggaaaaacatgtcctccttgcacaattttactggtgag cagatggctgcatattttggattttctgtagctgccactgacattaatggggatgattac gcagatgtgtttattggagcaccacttttcatggatcggggctctgatggcaaacttcaa gaggtggggcaggtcaccgtgtctcttcagagagcttcaggagaattccagactacaaag ctgaatgggtttgaggtcttcgcgcggtttggcagtgccatagctcctttgggagatctg gaccaggacggcttcaacgatattgcaattgctgctccatatgggggtgaagataaaaaa ggaatagtttatatcttcaatggaagatcaacgggcttaaacacagtgccatctcagatc ctcgaagggcagtgggcttcacagaacatgccaccgagctttggctattccatgaaggga gccacagacatagacaagaatggatatccagacttaattgtaggagcttttggtgtagat cgagctgtcttatacagggccagaccagttatcaccgtaaatgctggccttgaagtatac cctagcattttaaatcaagacaataaaacctgcccattgcctgggacagctctcaaagtt tcctgttttaatgtcaggttctgcttaaaggcagatggcaaaggagctcttccaaggaaa cttaacttccaggtggagcttcttttggataaactcaagcaaaagggagcaattcgtcga gcactgtttctccataacaggtccccgggtcactccaagaacatgacaatttctagaggg ggacagatgcagtgtgaagaactgatagcatatctgcgggatgaatctgaatttagagac aaacttacaccaattactatttttatggagtatcgcttggattatagaacagcagctgat gccaccggcttgcgacccatccttaaccagttcacccctgccaacatcagtcgacaggct catattttacttgactgtggtgaagacaacgtttgtaaacccaaactggaagtttctgta gatagtgatcaaaagaagatctatattggagacgacaaccctctcacattgattgttaag gctcagaatcaaggagaaggtgcctatgaagctgagctcatcatttccatgccaccgcag gctgatttcatcggggttgtccgaaacagtgaagccttagcaagactttcctgtgcattt aagacagaaaaccaaacccgccaagtggtatgtgacctgggaaacccaatgaaggctgga actcaactcttagctggtcttcgattcagtgtccaccagcaatcagagatggatacttct gtgaaatttgatttacaaatccaaagctctaatctttttgacaaagtaagcccagttgta tcatacagagttgaccttgctgttttagctgctgttgagataagaggagtctcaagtcct gatcatatctttcttccgattccaaattgggagcacaaggagaaccccgagactgaagaa gatgttggaccagttgttcagcacatttatgagctgagaaacaatggtccaagttcattc agcaaggccatgctaaatcttcagtggccttataaatataacaacaacactttgttgtac atccttcattatgacattgatggaccaatgaactgtacttcagatatggagatcaaccct ttgagaattaagatctcatctttgcaaacaactgaaaagaatgacacagttgctgggcaa ggtgaccggaaccatctcatcacaaagcgagatctcgccctcagtgaaggagatgttcac actttgggttgtggaattgctcagtgcttgaggattgtctgccaggttgggcgactagac agaggcaagagtgctatcctgtacgtgaagtctttactgtggaccgagaccttcatgaat aaggaaaaccagaatcattcatattctctgaagtcatctgcttcatttaatgtcatagag tttccttacaaaaaccttccaattgaggatatcttcaactccacattagttaccactaat gtcacctggggcattcagccagcgcccatgcctgtgcctgtgtgggtgatcattttagca gttctggcaggattgctgttgctggctgttttggtttttgtaatgtacaggatgggtttt tttaaacgtgttcggccacctcaagaagaacaggaaagggaacagcttcaaccacatgaa aatggtgaaggaaactcagaaacttaa

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