Sciurus carolinensis (gray squirrel): 124979270
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Entry
124979270 CDS
T08117
Name
(RefSeq) keratin, type I cytoskeletal 40-like
KO
K07604
type I keratin, acidic
Organism
ncar
Sciurus carolinensis (gray squirrel)
Pathway
ncar04915
Estrogen signaling pathway
ncar05150
Staphylococcus aureus infection
Brite
KEGG Orthology (KO) [BR:
ncar00001
]
09150 Organismal Systems
09152 Endocrine system
04915 Estrogen signaling pathway
124979270
09160 Human Diseases
09171 Infectious disease: bacterial
05150 Staphylococcus aureus infection
124979270
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
ncar04812
]
124979270
04147 Exosome [BR:
ncar04147
]
124979270
Cytoskeleton proteins [BR:
ncar04812
]
Eukaryotic cytoskeleton proteins
Intermediate filaments
Intermediate filaments
Types I and II: Acidic and basic keratins
124979270
Exosome [BR:
ncar04147
]
Exosomal proteins
Exosomal proteins of epithelial cells
124979270
Exosomal proteins of other body fluids (saliva and urine)
124979270
Exosomal proteins of colorectal cancer cells
124979270
Exosomal proteins of melanoma cells
124979270
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Filament
UPF0242
TPR_MLP1_2
Motif
Other DBs
NCBI-GeneID:
124979270
NCBI-ProteinID:
XP_047399744
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All DBs
Position
3:21609720..21614901
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AA seq
424 aa
AA seq
DB search
MTSDGSEASPVSCSSESGAQAPSCASASTCLPQPSCQTPCFLSRSHLPTGCLTPCYFAGS
CNSPCLLGSCAWCEDGVFNSNEKETMQFLNDRLANYLEKVRSLEETNAELESRIQEQCQP
DTPLVCPDYQCYFNTIEDLQQKILCTKAENSRLAVQLDNCKLATDDFRSKYESELSLRQL
VETDISGLRGILNELNLCKSDLEAHVESLKDDLLCLKKSHEEEVNVLRGQLGDRLSVELD
TAPTVDLTRVLDEMRCQYETVLASNRRDAEEWFALQTEELSQQQQSSVEQLQGCQTEMLE
LKRTANALEIELQAQQNLTESLECTVAETEAQYSTQLAQMQCLIDNVENQLAEIRCDLER
QNQEYEVLLDTKARLECEINTYRGLLESEDSRLACNPCSTTSTSNNTCEPCSAFLICTVE
NCCA
NT seq
1275 nt
NT seq
+upstream
nt +downstream
nt
atgacctctgatggttctgaagcttcccccgtgagctgctcttctgagtccggtgcccag
gctcccagctgtgcatccgcttccacctgtctcccccaacccagttgtcagacgccatgc
ttcctgtccaggtctcacctgcccaccggttgcctcacaccctgctactttgcagggagc
tgtaacagtccgtgcctgctggggagctgtgcttggtgtgaggatggtgtgttcaacagc
aatgagaaggagacaatgcagttcctgaatgacagacttgccaactatctggagaaggtc
cgcagtctggaggagaccaacgcggagctggaaagcaggatccaagaacaatgccagcca
gataccccgttggtgtgcccggattatcagtgttacttcaacaccattgaagacctccag
caaaagatcttatgcacgaaggcggagaattctagacttgccgtacagcttgacaactgc
aaactggccacggatgattttaggtcaaagtatgaaagtgagctgtctcttcgccagctg
gtggagacggacatcagtggcctgcgcggaatcctgaatgagctcaacctgtgcaaatct
gatctggaggcccacgtggagtctctgaaggacgatctcctctgccttaagaaaagtcac
gaagaggaggtcaacgtgcttcggggacagcttggagaccgcctcagtgtagagctggac
actgcccccaccgtcgacctcaccagggtcctggacgagatgcgatgtcagtatgaaacg
gtgctggccagcaaccgcagagacgcggaggaatggtttgcccttcagacagaagagttg
agtcagcagcagcagtccagcgtggagcagctgcagggctgccagacggagatgctggag
ctgaagcgaacggccaacgctctggaaatcgagctccaggcgcagcaaaacctgacagaa
tctctggaatgcactgtggcagaaacggaggcccagtacagtacccagttggcccagatg
caatgcctgattgataacgtggagaaccagctggcagagattcgctgcgacctggagcgg
cagaaccaggagtacgaggtgctgttggacacaaaggcccgactggagtgcgagatcaac
acgtaccggggcctgctggagagcgaggacagcaggctggcctgtaacccctgttctaca
acatccacgtcaaacaacacctgtgagccgtgctcagcgttcctcatttgcacagttgaa
aactgttgtgcttga
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