Sciurus carolinensis (gray squirrel): 124979383
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Entry
124979383 CDS
T08117
Name
(RefSeq) LOW QUALITY PROTEIN: ubiquitin-protein ligase E3B-like
KO
K10588
ubiquitin-protein ligase E3 B [EC:
2.3.2.26
]
Organism
ncar
Sciurus carolinensis (gray squirrel)
Pathway
ncar04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
ncar00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
124979383
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
ncar04121
]
124979383
Enzymes [BR:
ncar01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.26 HECT-type E3 ubiquitin transferase
124979383
Ubiquitin system [BR:
ncar04121
]
Ubiquitin ligases (E3)
HECT type E3
124979383
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NCBI-GeneID:
124979383
NCBI-ProteinID:
XP_047399787
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Position
3:57944803..57948430
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AA seq
574 aa
AA seq
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MFTVSQTSRAWFIDRATQAREERLVQXVEIQAHVQSFLCWCRLHRDIRREIDEFFKADDS
GSSKRSALCIFKIARKLLFLFKIKEDNERFEKLCCCILSSMDAENEPKVWYVSLSLSKDL
TLLWIKQIKDILWYCCEFLEQLKPEILQDSRLITLYLTMLVTFTDTSTWKILRGKGENLQ
AAMNHICANIMGHLNQHGFYSVLQVLLTRGLARPRPCLSQGTLTAAFSLALHPVIAAQFS
DNLIRPFLIHIMSVPTLVTHLRTATPEHLTVLESHDMLRKFIMFLRDRDQCRDICESLEG
CHTMCLMGNLLQLGSLSPRVLEEETNGFVSLLTHMLCYCQKYVSQKKSNLTHWHPVLVWF
SQSVDYGLNESMSLITKQLQFLWGVPLIRIFFSDNLSKKLLEHQDPPPXQPPSPQNVLPV
KSLLKRAFQKSASIQNILRPVGGKRVDSAEVQQVCNICVLYQTSLTTLTQIRLQILTENA
KGETMELFQSVHGWLMVLYERDCRRRFAPEDHWLRKDLKPSVLFQELDKDRKRAQLILQY
IPHVIPHKNVSRTQSWAPGISSHEDASTPQAGVL
NT seq
1725 nt
NT seq
+upstream
nt +downstream
nt
atgttcactgtctctcagacctcgagagcatggttcattgatagagccacccaggcacga
gaagaaaggctggtgcagnctgtggagattcaggcccacgtccagagttttctctgttgg
tgtcgactgcacagagacatcaggagagagattgatgagttttttaaagcagatgactct
gggtccagtaaaagaagtgcactttgtattttcaagattgccaggaaattgctgttcttg
ttcaaaatcaaagaggataatgagagattcgagaagttgtgttgttgtatcctgagcagc
atggatgctgagaatgaacctaaggtgtggtatgtatccctctctctttccaaggatctc
actctcctgtggattaaacaaatcaaggacattctgtggtactgctgtgagtttcttgag
cagctcaagcctgaaatcttgcaagactccagactcatcacactgtacctcacgatgctt
gtcaccttcacagacacttccacgtggaaaatcctccggggaaaaggtgagaaccttcaa
gcagccatgaaccacatctgtgcaaatataatgggacatctcaaccagcatgggttttac
tctgtgctgcaggtattgctaacccgaggcctggccagaccccggccttgtctgtcccag
ggcaccttaacagcggccttttctctggcactgcaccctgtgattgctgcacaattttca
gacaatctgattcggccgttcctcatccacatcatgtctgtgcctacacttgtgactcat
ctcaggacggcgacccctgagcatctcactgttttagaatctcacgacatgcttcgcaaa
ttcatcatgtttttaagagacagagaccaatgcagggacatatgtgaaagtttagaagga
tgccacactatgtgcctgatgggcaacctccttcagctgggctccctcagccccagagtg
ctggaggaggagaccaacggctttgtgagcttgcttacccatatgctgtgctactgtcag
aagtatgtgtcccagaagaaatccaacctgacccactggcaccctgtcctcgtctggttc
tcccagtctgtggattatggcctcaatgagtccatgtccttgatcaccaaacagctgcag
ttcctgtggggggtgcctctcatccgcatcttcttcagtgacaacttgagcaagaagttg
ttggagcaccaggacccgcccccgncccagccgccatccccgcagaacgtgcttcctgtg
aagagtcttctcaagcgtgcatttcagaagtctgcgtccattcagaatattctcaggcct
gtcgggggcaaacgcgttgactctgcagaggttcagcaggtctgcaacatctgtgtcctc
taccagacctcgctgacaactctcacccagatccgcctgcagattctcacagagaacgcc
aagggtgagaccatggagctcttccagtctgtccacgggtggctgatggtgctctacgag
cgggactgccgccggcgctttgcccctgaggaccactggctgcggaaggatctcaaacct
agtgtgctcttccaagaacttgacaaggaccgaaaaagggcacagttgatcctgcagtac
atcccacatgtcattcctcacaaaaatgtgagtcgcactcagagctgggctcctggaatc
tcttcacatgaagacgccagcactccccaagctggagtgttgtaa
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