KEGG   Sciurus carolinensis (gray squirrel): 124979597
Entry
124979597         CDS       T08117                                 
Name
(RefSeq) gamma-aminobutyric acid receptor-associated protein
  KO
K08341  GABA(A) receptor-associated protein
Organism
ncar  Sciurus carolinensis (gray squirrel)
Pathway
ncar04068  FoxO signaling pathway
ncar04136  Autophagy - other
ncar04137  Mitophagy - animal
ncar04140  Autophagy - animal
ncar04621  NOD-like receptor signaling pathway
ncar04727  GABAergic synapse
Brite
KEGG Orthology (KO) [BR:ncar00001]
 09130 Environmental Information Processing
  09132 Signal transduction
   04068 FoxO signaling pathway
    124979597
 09140 Cellular Processes
  09141 Transport and catabolism
   04140 Autophagy - animal
    124979597
   04136 Autophagy - other
    124979597
   04137 Mitophagy - animal
    124979597
 09150 Organismal Systems
  09151 Immune system
   04621 NOD-like receptor signaling pathway
    124979597
  09156 Nervous system
   04727 GABAergic synapse
    124979597
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:ncar04131]
    124979597
   04121 Ubiquitin system [BR:ncar04121]
    124979597
   03029 Mitochondrial biogenesis [BR:ncar03029]
    124979597
Membrane trafficking [BR:ncar04131]
 Autophagy
  Autophagosome formation proteins
   Atg8 conjugation proteins
    124979597
Ubiquitin system [BR:ncar04121]
 Ubiquitins and ubiquitin-like proteins
  Ubiquitin-like proteins (UBLs)
   124979597
Mitochondrial biogenesis [BR:ncar03029]
 Mitochondrial quality control factors
  Mitophagy factors
   Autophagy-related proteins
    124979597
SSDB
Motif
Pfam: ATG8 APG12
Other DBs
NCBI-GeneID: 124979597
NCBI-ProteinID: XP_047399939
LinkDB
Position
3:52445225..52447360
AA seq 117 aa
MKFVYKEEHPFEKRRSEGEKIRKKYPDRVPVIVEKAPKARIGDLDKKKYLVPSDLTVGQF
YFLIRKRIHLRAEDALFFFVNNVIPPTSATMGQLYQEHHEEDFFLYIAYSDESVYGL
NT seq 354 nt   +upstreamnt  +downstreamnt
atgaagttcgtgtacaaagaggagcatccgttcgagaagcgccgctctgagggcgagaag
atccgaaagaaatacccggaccgggtcccggtgatagtagaaaaggctcctaaagctcgg
ataggagatctggacaaaaagaaatacttggtgccttctgatctcacagttggtcagttc
tacttcttgatccggaagcgaattcatctccgagctgaggatgccttgtttttctttgtc
aacaatgtcattccacccactagtgccaccatgggtcagctataccaggaacaccacgag
gaagacttctttctatacattgcctacagtgatgaaagcgtctacggtctgtga

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