Sciurus carolinensis (gray squirrel): 124979631
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Entry
124979631 CDS
T08117
Name
(RefSeq) calmodulin-binding transcription activator 2 isoform X1
KO
K21596
calmodulin-binding transcription activator
Organism
ncar
Sciurus carolinensis (gray squirrel)
Brite
KEGG Orthology (KO) [BR:
ncar00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ncar03000
]
124979631
Transcription factors [BR:
ncar03000
]
Eukaryotic type
Other transcription factors
Others
124979631
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Gene cluster
GFIT
Motif
Pfam:
CG-1
TIG
Ank_2
Ank
IQ
Ank_3
IQ_SCN5A_C
Ank_5
AGRB_N
Motif
Other DBs
NCBI-GeneID:
124979631
NCBI-ProteinID:
XP_047400054
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All DBs
Position
3:complement(54440356..54456288)
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AA seq
1229 aa
AA seq
DB search
MAAAAVTRGTPGDSPSPWPEGPGVTLLPGALTMNTKDTTEVAENSHHLKIFLPKKLLECL
PRCPLLPPERLRWNTNEEIASYLITFEKHDEWLSCAPKTRPQNGSIILYNRKKVKYRKDG
YLWKKRKDGKTTREDHMKLKVQGMEPVSWQCLYGCYVHSSIVPTFHRRCYWLLQNPDIVL
VHYLNVPALEDCGKGCSPIFCSISSDRREWLKWSREELLGQLKPMFHGIKWSCGNGTEEF
SVEQLVQQILDTHPTKPAPRTHACLCSGGLGSGSLTHKCSSTKHRIISPKVDPRPLTLTS
ISQPQPPEPPPLIAPLPSELPKAHTSPSSSSSSSSSSGFAEPLEIRLSPPTSRGNSSRGG
TAILLLTGLEQRAGGLTPTRHLSHQTDRRPSVSLAVVVGSEPSAPPAPPSPAFDPDRFLN
SPQRGQTYGGGQGVNPDFPEAEAARTPCPALEPAAALEPQAAARAPPPQSGTGGRRGNCF
FIQDDDNGEELKSQGAAPPVPSPPPSSPSSPAPSEPSGRVARGEPLFGGPGGSSELESFS
LSSFPDLMGELISDEAPSIPAPNPQLSPALSTITDFSPEWSYPEGGVKVLITGPWTEAAE
HYSCVFDHIAVPASLVQPGVLRCYCPAHEVGLVSLQVAGQEGPLSASVLFEYRARRFLSL
PSTQLDWLSLDDNQFRMSILERLEQMEKRMAEIAAAGQAPCQGPEAPLIQDEGQGPGFEA
RVVVLVESMIPRSTWRGPERLTHGSPFRGMSLLHLAAAQGYARLIETLSQWRSVETGSLD
LEQEVDPLNVDHFSCTPLMWACALGHLEAAVLLFRWNRQALSIPDSLGRLPLSVAHSRGH
VRLARCLEELQRQEASVEPSLALSPPSSSSDTGLSSVSSPSELSDGTFSITSAYSSAPDG
SPPPAPVSTSEITMEEVVPGQLSSDVPEAPLLLMDYEATNSKGSPPAPVLSPAPDDEAPE
DTSSSSAVDVIPVDMISLAKQIIEATPERIKREDFVGLPEAGRERTGAVGLSETMSWLAS
YLENVDHFPSSAPPSELSFERGRLAIPPAPSWAEFLSASTSGKMESDFALLTLSDHEQRE
LYEAARVIQTAFRKYKGRRLKEQQEVAAAVIQRCYRKYKQLTWIALKFALYKKMTQAAIL
IQSKFRSYYEQKRFQQSRRAAVLIQQHYRSYRRRPSGPLPARNKSSFLTKKQDQAARKIM
RFLRRCRHRMRELKQNQELEGLPQPGLAT
NT seq
3690 nt
NT seq
+upstream
nt +downstream
nt
atggccgctgccgccgtcacccgcgggaccccgggagactccccctccccctggcctgag
gggccgggggtgaccttgctccctggagccctcaccatgaataccaaggataccacggag
gttgctgagaacagccatcacttgaagatcttcctccccaagaagctgctggagtgtctt
ccccgctgcccactgctgcctccagagcggctacggtggaatacaaatgaggagattgca
tcctacctgatcacctttgaaaagcatgatgagtggctatcctgtgccccaaagacaaga
cctcaaaatggctccatcatcctctacaaccgcaagaaggtgaaataccggaaggatggt
tacctctggaagaagcgaaaagatgggaagaccacccgagaggaccacatgaaactgaag
gtccagggcatggagcctgtctcctggcagtgtctctatggctgctacgttcactcttcc
atcgtccccacattccatcggcgctgctactggcttctccagaatcctgacatcgtcctt
gtgcactacctgaacgtcccagccctcgaggattgtggaaagggctgcagccccatcttt
tgttccatcagcagcgaccggcgagagtggctgaagtggtcccgggaggagcttttggga
cagctgaagcctatgtttcatggcatcaagtggagctgtgggaatgggacagaagagttc
tctgtggaacagctggtgcagcagatcttggacacacacccaaccaagcctgcaccccga
acccatgcctgtctctgcagtgggggccttggttctgggagccttacccacaaatgcagc
agcacgaaacaccgcatcatctctcccaaagtggatccccgacctttaaccctgacctct
atctcccagccccaaccccctgagcctcctccactgatagccccacttccctcagagctc
cccaaggcacatacctccccatcttcttcctcctcctcctcttcctcatcaggctttgca
gaacccctagaaatcagacttagccctcccacctctcgagggaattcatcaagaggaggt
actgccatcctcctcctgacaggactggaacagcgtgcagggggcttgacacccaccagg
cacctgtctcaccagactgatcgtaggccttctgtgagcttggctgtggttgtaggctct
gagccctctgccccaccagctcctcccagccctgcctttgaccctgatcgttttctcaac
agccctcaaaggggccagacatatggagggggccagggggtgaacccagacttccctgaa
gcagaggctgcccgtaccccctgtcctgccctagagcctgctgctgctctggagccccag
gcagctgctcgggcaccccctccacagtctggaacaggtgggagaagaggaaactgcttc
ttcatccaagatgatgataatggagaggagctcaagagccagggggctgcaccacctgta
ccttcaccccctccttcatccccatcctcacctgccccctcagagccatcaggcagggta
gcaagaggggagcccttgtttggaggacctggtgggtccagtgaattggagtccttcagt
ctttcatcattcccagaccttatgggagaactcatcagtgatgaagctccaagcatccct
gccccaaatccgcagctctctcctgctcttagcaccatcacagatttctccccagaatgg
tcctacccagagggtggggtcaaggtgctcatcacaggtccttggacggaggccgccgag
cattattcctgcgtctttgatcacatcgcagtgccagcgtcacttgtccagcctggtgtc
ttacgctgctactgtcctgcccacgaggtggggctggtgtctttgcaggtggcagggcag
gaggggcccctttctgcttctgtgctctttgaatatcgagcccgcagattcctgtctctg
cctagtacacaacttgactggttgtcactggatgacaaccagtttcgaatgtccatcctg
gaacggctggagcagatggagaagcgtatggcagagattgcagcagccgggcaggcacct
tgccagggtcctgaggctcctctaattcaggatgaaggccaagggcctgggtttgaggca
cgggtggtcgtcttggtagaaagcatgatcccacgctctacctggagaggtcctgaacgt
ctgacccatggcagccccttccggggcatgagtcttctgcacctggctgctgctcagggc
tatgcccgcctcatcgagaccctgagccagtggcggagtgtggagactggaagcttggac
ttagagcaagaggttgacccgctcaacgtggatcatttctcttgcacccctttgatgtgg
gcctgtgccctgggacacctggaggctgcagtgcttcttttccgttggaaccgtcaggca
ctgagcattcctgattctctgggccgtctacccttgtctgtggctcactcccggggtcac
gtgcgccttgcccgctgccttgaggagctgcagagacaggaagcttcagttgaaccctca
cttgccctgtcgccaccctcctccagctcagacactggtctgagcagcgtgtcctcacca
tcagagctatcagatggcactttctccatcacatccgcctactctagtgccccggatggc
agtcctccccctgctcctgtgtcaacctctgagattactatggaggaggtggtcccaggc
caactctcctctgatgttccagaggcccccctactcctcatggactatgaagctaccaac
tccaaagggtccccacccgctcctgtcctatcaccagccccagatgatgaggctccagag
gacaccagtagctcatcggctgtggatgtgatcccggtggacatgatctcactagccaag
cagatcattgaagccacaccagagcggattaaacgagaggactttgtggggctacctgag
gctggcagggagcggacaggggccgtggggctcagtgagaccatgtcctggctggccagc
tacctggagaatgtggaccacttccccagctcagcccctcccagtgaactgtcctttgag
cgaggtcgcctggctatccctccagcaccttcctgggcagagtttctgtctgcatctacc
agtggcaagatggaaagtgattttgccctgctgacactatcggatcatgagcagcgggaa
ctgtatgaggcagcccgagtcatccagacagcattccgaaagtataagggccggcggctg
aaggagcagcaggaagtagcagcagctgtgatccagcgctgttacaggaagtacaagcag
ctgacttggattgctcttaagtttgcactctataagaagatgacccaggcagccatcctg
atccagagcaagttccgaagctactatgaacagaagcgatttcagcagagccgccgagcg
gctgtactcatacaacagcactaccgctcataccgtcgccggccctcaggccccctgcct
gcccgcaataaaagctcctttctcaccaagaagcaggaccaggcagcccggaagatcatg
agattccttcggcgctgcagacacaggatgagggaactgaagcagaaccaggagctggaa
gggcttccccagccgggactggccacctga
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integrated database retrieval system
