KEGG   Sciurus carolinensis (gray squirrel): 124979691
Entry
124979691         CDS       T08117                                 
Name
(RefSeq) THO complex subunit 4
  KO
K12881  THO complex subunit 4
Organism
ncar  Sciurus carolinensis (gray squirrel)
Pathway
ncar03013  Nucleocytoplasmic transport
ncar03015  mRNA surveillance pathway
ncar03040  Spliceosome
ncar05014  Amyotrophic lateral sclerosis
ncar05168  Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:ncar00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    124979691
  09122 Translation
   03013 Nucleocytoplasmic transport
    124979691
   03015 mRNA surveillance pathway
    124979691
 09160 Human Diseases
  09172 Infectious disease: viral
   05168 Herpes simplex virus 1 infection
    124979691
  09164 Neurodegenerative disease
   05014 Amyotrophic lateral sclerosis
    124979691
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:ncar03019]
    124979691
   03041 Spliceosome [BR:ncar03041]
    124979691
Messenger RNA biogenesis [BR:ncar03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    EJC complex
     124979691
    TREX complex
     124979691
Spliceosome [BR:ncar03041]
 Complex C
  Other components
   EJC/TREX
    124979691
 Other splicing related proteins
  Spliceosome associated proteins (SAPs)
   TREX complex
    124979691
SSDB
Motif
Pfam: RRM_1 FoP_duplication RRM_occluded
Other DBs
NCBI-GeneID: 124979691
NCBI-ProteinID: XP_047400194
LinkDB
Position
3:1154349..1158047
AA seq 256 aa
MADKMDMSLDDIIKLNRSQRGGRGGGRGRGRAGSQGGRGGGAQAAARVNRGGGLMRNRPA
IARGAAGGGGRNRPAPYSRPKQLPDKWQHDLFDSGFGGGAGVETGGKLLVSNLDFGVSDA
DIQELFAEFGTLKKAAVHYDRSGRSLGTADVHFERKADALKAMKQYNGVPLDGRPMNIQL
VTSQIDTQRRPVQSINRGGMTRNRGSGGFGGGGTRRGTRGGSRGRGRGTGRNSKQQLSAE
ELDAQLDAYNARMDTS
NT seq 771 nt   +upstreamnt  +downstreamnt
atggccgacaaaatggacatgtctctggacgacatcattaagctgaaccggagccagcga
ggtggccgcggcgggggccggggccgcggcagggccggctcccagggcggccgtggcggc
ggggcgcaggccgctgcgcgggtgaatcgaggcggcggactcatgcggaaccggccggcc
atcgcccgcggcgctgcgggcggcggcggcaggaaccggccggcgccctacagcaggccg
aaacagcttcccgacaagtggcagcacgacctgttcgacagcggcttcgggggcggtgcc
ggcgtggagacgggtgggaagctgctggtgtcaaatctggatttcggagtgtcagacgcc
gacattcaggaactctttgctgaatttggaacgctgaagaaggcggctgtgcactatgat
cgctctggccgcagcttagggacagcagatgtgcactttgaacggaaagcagatgccctg
aaggctatgaaacagtacaacggtgtccctttggatggccgccccatgaacatccagctt
gtcacatcacagattgacacacagcggagacccgtacagagcataaacagaggtggcatg
actagaaaccgtggctccggaggttttggtggtggtggcacccggagagggacccgtgga
ggtagccggggaagaggcagaggtaccggcaggaactcaaagcaacagctctctgcggag
gagctggacgcgcagctggatgcctataatgcgaggatggacaccagttaa

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