Sciurus carolinensis (gray squirrel): 124979753
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Entry
124979753 CDS
T08117
Name
(RefSeq) protein zyg-11 homolog A
KO
K10350
Zyg-11 protein
Organism
ncar
Sciurus carolinensis (gray squirrel)
Brite
KEGG Orthology (KO) [BR:
ncar00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
ncar04121
]
124979753
Ubiquitin system [BR:
ncar04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
Cul2 complex
Target recognizing subunit
124979753
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ZER1-like_2nd
LRR_Zer-1
ARM_ARMC5
ARM_PUB
LRR_4
Arm_3
LRR_EndoS
DUF6860
Motif
Other DBs
NCBI-GeneID:
124979753
NCBI-ProteinID:
XP_047400358
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All DBs
Position
1:complement(167369268..167425862)
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AA seq
756 aa
AA seq
DB search
MVHFLHPGLSPRNLVPPDAQKDASGCCVVQEEASPYSLANICMNVLIANLEELCSERPDG
TLCLPEHWSFPQEVADRFLEMMVWQGKLTDRTASIFRGNQMNLKMVNIQKAKISAAAFIK
AFCHHKLLEIDATGVHSDLPIPDILSGLCSSSWIQQNLRSLLLDSTSVPQDSRRLSFGQL
TGLRVLSVFNVCFHTEDLANVSQLPNLENLDISNTLVTNISALLNCKDRLKSLTMHYLKC
LTMTKPQILGVIRELKCLLHLDISDHRQLKSDLAFHLLQQKDILPKVVSLDISGGSCITD
GAVEQFIRQRPAMQFVGLLATDAGYSDFFTAKQGLRVAGGASMGQISEALSRYGNRSCFM
KEALYRLFTETFSMHVSMPAVLKLVAVGMRNHPLDLPVQFTASACALNLTRQGLARGMPV
RLLSEVTCLLFKALKNFPHYQQLQKNCLLSLTNSRILVDVPFDRFDAAKFVMKWLSRHEN
PKMQTMAVSITSILALQLSPEQIAQLQEELFTAVKELLAIVKQKTTENLDDVTLLFTLKA
LWNLTDESPAACKHFIVNQGLAIYIQVLETFSESSVQSKVLGLLNNIAEVREFSSKLVTE
DVMKHISSLLHSKEIEVSYFAAGIIAHLTSDRQPWLFRDLQRKALLQDLHATMENWPSAS
CKMSALVTYRSFKSFFPLLGNFSQPAVQIWALWAMYHVCSKNPSKYCKMLVEEGGLQLLY
DIQEHSQANPQAQQMATSILEDFRMHFMNYRSHPLC
NT seq
2271 nt
NT seq
+upstream
nt +downstream
nt
atggtccacttcttgcacccggggctgtcgccccggaacctcgtccctcccgacgcccag
aaggatgcctcgggctgctgcgtggtgcaggaggaggcatcaccctattctttggccaac
atctgcatgaatgtcctgattgctaatctggaagaattgtgttctgaaagacctgatgga
acactgtgccttccagagcattggagtttccctcaggaagtagctgatcgattccttgag
atgatggtttggcaaggaaagctgactgatagaacagcaagtattttccgaggcaaccaa
atgaacctgaagatggtcaatatccaaaaagctaaaatctctgcggctgccttcataaaa
gccttctgccatcataaactccttgaaatagatgccactggagtgcactctgaccttcca
atcccagatatcttaagtggactctgcagcagtagctggatccagcaaaacctccggagc
ctcctgttagactcaacaagcgttcctcaagattcaagacgactgtcctttggtcagctc
actggacttcgcgttttaagtgttttcaatgtttgctttcacactgaagaccttgctaat
gtttctcagttaccaaacctggaaaacttggacatctccaatactctggtcacgaacatc
tctgcactccttaactgtaaggatcgactcaagtctctcacaatgcactacctgaaatgc
ctgaccatgaccaaaccacaaattcttggagtcatcagagaacttaaatgtctccttcac
cttgatatttccgatcacaggcaactcaaatcagacttagcttttcatctgctacagcag
aaggatatcctgccaaaggtggtatccctggatatttctggaggcagttgcatcactgat
ggagcggtagagcagtttatacggcagcggcccgcaatgcagtttgtgggactcttggct
acagatgctggttattctgacttctttactgcaaagcaaggcttgagggttgctggagga
gccagtatgggtcagatttctgaagcactgagccgatatgggaataggtcatgttttatg
aaggaagctctttataggctcttcacagagacgttttcaatgcatgtaagcatgcctgct
gttttaaagcttgtggctgtaggaatgaggaatcatccattggatttaccagtgcaattc
acagccagtgcttgtgccctcaacttaacacgccagggcctggcccgggggatgcctgtt
cgcctgctctcagaggtcacttgtctacttttcaaggctctgaaaaatttcccccattac
caacagctacagaagaattgtcttctttccttaaccaattccaggatacttgtggatgtt
ccgtttgacagatttgatgctgccaagtttgttatgaaatggctcagtaggcatgagaac
cccaaaatgcaaactatggcagtgagcatcacctctattctagcactgcagttatcacct
gagcaaatcgcacaactccaagaagagctcttcacagcagttaaggaacttctggcaatt
gtaaaacaaaagactactgagaatttagatgatgtcaccctcttgtttactttgaaagcg
ctttggaatcttacagatgaatctccagctgcctgcaaacactttattgtcaaccaagga
ttggcaatctacattcaagttttagagactttttcagaatcttcagtacaaagcaaagta
cttggtctcttgaacaacatagctgaagtcagagagttttcctccaagctggtgactgaa
gatgtgatgaagcatatcagcagtttacttcatagcaaagaaatagaagtgagctatttt
gctgcaggtatcatagctcacctgacatctgacagacagccttggctattccgtgacctg
cagaggaaagctcttctccaggatttgcatgcaaccatggagaattggccaagtgcaagc
tgtaagatgtcagcattggtaacctacagatcattcaagtcatttttccctctccttggc
aatttctctcaaccagcagttcagatctgggcactatgggccatgtatcatgtctgcagt
aaaaatcccagcaaatactgcaaaatgttagttgaagaaggaggattgcagctcttgtat
gatatccaggagcacagtcaggcaaaccctcaagcacagcagatggcaacttccattcta
gaagacttcaggatgcatttcatgaattatcggagtcaccctctgtgttga
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