KEGG   Sciurus carolinensis (gray squirrel): 124979782
Entry
124979782         CDS       T08117                                 
Name
(RefSeq) E3 ubiquitin-protein ligase rififylin isoform X1
  KO
K20804  E3 ubiquitin-protein ligase RNF34 [EC:2.3.2.31]
Organism
ncar  Sciurus carolinensis (gray squirrel)
Brite
KEGG Orthology (KO) [BR:ncar00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:ncar04121]
    124979782
Enzymes [BR:ncar01000]
 2. Transferases
  2.3  Acyltransferases
   2.3.2  Aminoacyltransferases
    2.3.2.31  RBR-type E3 ubiquitin transferase
     124979782
Ubiquitin system [BR:ncar04121]
 Ubiquitin ligases (E3)
  Single Ring-finger type E3
   RBR proteins
    124979782
SSDB
Motif
Pfam: RNF34L-like_3rd FYVE_CARP1-2 zf-C3HC4_3 ARMET_C SAP FYVE Prok-RING_4 zf-RING_5 zf-RING_2 zf-C3HC4_2 FYVE_2
Other DBs
NCBI-GeneID: 124979782
NCBI-ProteinID: XP_047400448
LinkDB
Position
3:complement(38275954..38335180)
AA seq 396 aa
MISSEHGSNNLGGRNWRQLAVCCGNVLKQAKSDFIMWATCCNWFCLDGQPEEVPPAPGAR
TQAYSNPGYSSFPSPTGLEPSCKACGANFANTDRKQTCLDCKKNFCMTCSSQEGNGPRLC
LLCQRFRATAFQREELMKMKVKDLRDYLSLHDISTEMCREKEELVFLVLGQQPVISEEDR
THAPTLSQDLPEQQAFLTQPHASTVPPTSPSLPSSPAQATSVPPAQESQQANGHVSQDQE
EPVYLESTARAPTEDETQSIDSEDSFVPGRRASLSDLTHLEDIEGLTVRQLKEILARNFV
NYKGCCEKWELMERVTRLYKDQKGLQHLVCGAEDQNGGAMPPALEENLCKICMDSPIDCV
LLECGHMVTCTKCGKRMNECPICRQYVIRAVHVFRS
NT seq 1191 nt   +upstreamnt  +downstreamnt
atgatctcatctgaacatggctccaacaacctcggtggcaggaattggaggcagcttgct
gtctgctgtggcaatgttttgaaacaggcaaaatcagattttatcatgtgggcaacctgc
tgcaactggttctgcctggatggacagcctgaggaggtcccaccagcccccggagccagg
acacaagcctattccaaccctgggtacagctccttcccttccccaacaggcttagaacca
agctgcaaggcgtgtggagccaacttcgcaaacacagacaggaagcagacctgtttggac
tgtaagaaaaatttctgcatgacctgttccagccaggaggggaatgggccccgcctttgc
cttctctgccaacggttccgagccacagcctttcagcgggaggagctcatgaagatgaag
gtgaaggacctgagggactacctcagcctccatgacatctctactgaaatgtgccgggag
aaagaagaactggtattcttggtgcttggtcagcagcctgtaatctctgaggaggacagg
actcatgcccccaccttgtcccaggaccttcccgagcaacaggccttcctgacccagcct
catgccagcacagtacctcctacctcacccagcctcccttcttcacctgcacaagccacc
tctgttcctcctgctcaggaaagccagcaggccaatggccatgtgtctcaggaccaagag
gagcctgtctacctggagagcacagccagagcacctaccgaggatgagacccagtccatt
gactctgaggatagctttgtcccaggccggagggcctctctgtctgacctgacccacctg
gaggacattgaaggcttgacggtgcggcagctgaaagagatcctggctcgcaactttgtc
aactacaagggctgttgtgagaagtgggagctgatggagcgagtgacacggctgtacaag
gatcagaaaggactccagcacctggtgtgtggtgctgaggaccaaaacgggggagcaatg
ccacctgcactggaggagaacctgtgtaagatctgcatggactcacccattgactgtgtt
ctgctggagtgtggccacatggtaacctgtaccaagtgtggcaagcgtatgaatgaatgt
cccatctgccggcagtatgtgatccgagctgttcacgtcttccggtcctaa

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