Sciurus carolinensis (gray squirrel): 124979782
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Entry
124979782 CDS
T08117
Name
(RefSeq) E3 ubiquitin-protein ligase rififylin isoform X1
KO
K20804
E3 ubiquitin-protein ligase RNF34 [EC:
2.3.2.31
]
Organism
ncar
Sciurus carolinensis (gray squirrel)
Brite
KEGG Orthology (KO) [BR:
ncar00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
ncar04121
]
124979782
Enzymes [BR:
ncar01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.31 RBR-type E3 ubiquitin transferase
124979782
Ubiquitin system [BR:
ncar04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
RBR proteins
124979782
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNF34L-like_3rd
FYVE_CARP1-2
zf-C3HC4_3
ARMET_C
SAP
FYVE
Prok-RING_4
zf-RING_5
zf-RING_2
zf-C3HC4_2
FYVE_2
Motif
Other DBs
NCBI-GeneID:
124979782
NCBI-ProteinID:
XP_047400448
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Position
3:complement(38275954..38335180)
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AA seq
396 aa
AA seq
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MISSEHGSNNLGGRNWRQLAVCCGNVLKQAKSDFIMWATCCNWFCLDGQPEEVPPAPGAR
TQAYSNPGYSSFPSPTGLEPSCKACGANFANTDRKQTCLDCKKNFCMTCSSQEGNGPRLC
LLCQRFRATAFQREELMKMKVKDLRDYLSLHDISTEMCREKEELVFLVLGQQPVISEEDR
THAPTLSQDLPEQQAFLTQPHASTVPPTSPSLPSSPAQATSVPPAQESQQANGHVSQDQE
EPVYLESTARAPTEDETQSIDSEDSFVPGRRASLSDLTHLEDIEGLTVRQLKEILARNFV
NYKGCCEKWELMERVTRLYKDQKGLQHLVCGAEDQNGGAMPPALEENLCKICMDSPIDCV
LLECGHMVTCTKCGKRMNECPICRQYVIRAVHVFRS
NT seq
1191 nt
NT seq
+upstream
nt +downstream
nt
atgatctcatctgaacatggctccaacaacctcggtggcaggaattggaggcagcttgct
gtctgctgtggcaatgttttgaaacaggcaaaatcagattttatcatgtgggcaacctgc
tgcaactggttctgcctggatggacagcctgaggaggtcccaccagcccccggagccagg
acacaagcctattccaaccctgggtacagctccttcccttccccaacaggcttagaacca
agctgcaaggcgtgtggagccaacttcgcaaacacagacaggaagcagacctgtttggac
tgtaagaaaaatttctgcatgacctgttccagccaggaggggaatgggccccgcctttgc
cttctctgccaacggttccgagccacagcctttcagcgggaggagctcatgaagatgaag
gtgaaggacctgagggactacctcagcctccatgacatctctactgaaatgtgccgggag
aaagaagaactggtattcttggtgcttggtcagcagcctgtaatctctgaggaggacagg
actcatgcccccaccttgtcccaggaccttcccgagcaacaggccttcctgacccagcct
catgccagcacagtacctcctacctcacccagcctcccttcttcacctgcacaagccacc
tctgttcctcctgctcaggaaagccagcaggccaatggccatgtgtctcaggaccaagag
gagcctgtctacctggagagcacagccagagcacctaccgaggatgagacccagtccatt
gactctgaggatagctttgtcccaggccggagggcctctctgtctgacctgacccacctg
gaggacattgaaggcttgacggtgcggcagctgaaagagatcctggctcgcaactttgtc
aactacaagggctgttgtgagaagtgggagctgatggagcgagtgacacggctgtacaag
gatcagaaaggactccagcacctggtgtgtggtgctgaggaccaaaacgggggagcaatg
ccacctgcactggaggagaacctgtgtaagatctgcatggactcacccattgactgtgtt
ctgctggagtgtggccacatggtaacctgtaccaagtgtggcaagcgtatgaatgaatgt
cccatctgccggcagtatgtgatccgagctgttcacgtcttccggtcctaa
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