Sciurus carolinensis (gray squirrel): 124979788
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Entry
124979788 CDS
T08117
Name
(RefSeq) pre-rRNA 2'-O-ribose RNA methyltransferase FTSJ3 isoform X1
KO
K14857
AdoMet-dependent rRNA methyltransferase SPB1 [EC:2.1.1.-]
Organism
ncar
Sciurus carolinensis (gray squirrel)
Brite
KEGG Orthology (KO) [BR:
ncar00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
ncar03009
]
124979788
Ribosome biogenesis [BR:
ncar03009
]
Eukaryotic type
Pre-60S particles
Other pre-60S particles
124979788
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Gene cluster
GFIT
Motif
Pfam:
Spb1_C
FtsJ
DUF3381
Phage_integr_3
M16C_assoc
Methyltransf_23
Motif
Other DBs
NCBI-GeneID:
124979788
NCBI-ProteinID:
XP_047400462
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All DBs
Position
3:14724500..14731867
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AA seq
841 aa
AA seq
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MGKKGKVGKSRRDKFYHLAKETGYRSRSAFKLIQLNRRFQFLQKARALLDLCAAPGGWLQ
VAAKFMPVSSLIVGVDLVPIKPLPNVVTLQEDITTERCRQALRKELKTWKVDVVLNDGAP
NVGASWVHDAYSQAHLTLMALRLACDFLARGGCFITKVFRSRDYQPLLWIFQQLFRRVQA
TKPQASRHESAEIFVVCQGFLAPDKVDSKFFDPKFAFKEVEVQAKTVTELVSKKKPKAEG
YAEGDLTLYHRTSVTDFLRAANPVDFLSKASEISIDDEELAQHPATTEDIQACCQDIRVL
GRKELRSLLNWRTKLRRYVAKKLKEQAKALDISLSSGEEEEGEEEEESIGGTTRQPSKEE
EEEEQLNQTLAEMKAQEVAELKRKKKKLLREQRKQRERVELKMDLPGVSIADEGETGMFS
LRTIRGHQLLEKVTQGDMSAADTFLSDLPRDDIYVSDAEEEEDASLDSDLDSEELAGIRR
HQGLKDPKSVQFTQVEDKEEEVEEENPLLVPLEEKTVLQEEQANLWFSKDGFSGLEDDAD
EALEISQAQLLYESRRKGQQQEYQQQQQPPPSSLKTPRKSPQYQDEIPKGTKTPSGTESA
THPGGEENGSSESDSSSSEDEERCESSRGKKRSRGPKSDDSGFEIVPIEDPVKHRILDPE
GLALGAVIASSKKAKRDLIDNSFNRYAFNEDEGELPEWFVQEEKQHRIRQLPVDKKEVEY
YRKRWREINARPIKKVAEAKARKKRRMLKKLEQTKKKAEAVVNTVDISEREKVAQLRSLY
KKAGLGKEKRQVTYVVAKKGVGRKVRRPAGVRGHFKVVDSRMKKDQRAQQRKEQKKKQKR
K
NT seq
2526 nt
NT seq
+upstream
nt +downstream
nt
atgggcaagaagggcaaagttggaaagagtcggcgggacaagttttatcatctggcaaag
gagactggttaccgttcccgctctgctttcaagttgatccaactcaatcgccgctttcag
ttcctgcagaaagcccgagccttgctggatctgtgtgctgcgccaggaggatggctccag
gtggctgctaagtttatgcctgtatccagtcttattgtgggagtggacttggttccaatc
aagcctctccccaatgtggtgactctccaggaggacatcactacagaacgatgtaggcag
gccctgaggaaggagctgaagacctggaaggttgatgttgtactcaatgacggggccccc
aatgttggggccagctgggtccatgatgcttactcacaagcccacttgacactgatggct
ctgcgtctggcttgtgattttttggcccgtggtggctgcttcatcacaaaggttttccgt
tctcgtgattatcaacccttgctgtggatattccagcagctgttccgtcgggtccaagcc
accaagccccaagcttctcgccatgaatctgcagaaatctttgtagtctgccagggattt
ctggctcctgacaaggttgatagtaaattcttcgatcccaagtttgccttcaaggaggtt
gaagttcaggctaagactgttactgagttggtgtccaagaagaagccaaaggctgaaggc
tatgctgaaggtgaccttactctttatcaccgtacttcagtcactgacttcctgcgagct
gccaaccctgttgacttcctctccaaggccagcgaaatttcaatagatgatgaagagttg
gcacaacatccagccaccactgaggacatacaggcatgctgtcaggacatcagagtgctg
gggcgcaaggaactcaggtcactactgaactggagaacaaaacttcgtcgatatgtggcc
aagaaactgaaagagcaagcaaaggcactagacatcagcctcagctcaggagaggaagaa
gaaggtgaggaagaggaggagtcaataggtggaaccacaaggcagccctctaaggaggag
gaggaggaggagcaactaaaccagaccctggcagagatgaaagcccaggaggtagcagaa
ttaaagaggaagaaaaagaaattgctacgtgagcagagaaaacagcgggaacgagtagag
ctgaagatggatctgcctggggtttccattgcagatgagggagagacaggcatgttttcc
ctgcgcaccattcggggtcaccagttgttagagaaagtaacacaaggtgacatgagtgct
gcagacacatttctgtctgacttgccaagggatgacatctatgtgtcagatgctgaggag
gaggaggatgcatctctggacagtgacctggattcagaggagttggcaggaatcaggaga
catcagggtctaaaggacccaaagagtgtgcagtttactcaagtagaagataaagaggag
gaggtagaggaagaaaatccactgttggtaccactggaggaaaagacagtgctgcaggaa
gagcaagccaacttgtggttctcaaaggatggcttcagtgggctggaggatgatgctgat
gaggccctggaaatcagtcaggcccaactgttatatgagagccgccggaaggggcagcag
caagaataccagcagcagcagcagccaccaccttccagtttgaagaccccaaggaagtct
ccccaataccaggatgagatccctaaagggacaaagactccctcaggaacagaaagtgcc
actcatcctggaggggaagaaaatggcagctcagagagtgatagcagtagcagtgaggat
gaagagcgttgtgaatcatcacgtggtaagaagcgaagccgtggacctaagtcagatgac
agcgggtttgagatagtgcctatcgaggacccagtgaaacatcggattctagatcctgaa
ggccttgctttaggtgctgttattgcctcttccaaaaaggccaagagagaccttatagac
aactccttcaaccggtatgcatttaatgaagatgagggggagcttccagagtggtttgtg
caggaagagaaacagcaccggataaggcaattgcctgttgataagaaagaggtggagtat
taccgaaaacgttggcgggaaatcaatgcacgtcccatcaagaaagtggctgaggccaag
gccagaaagaaacggaggatgctgaagaagttggagcagaccaagaagaaggcagaagct
gtggtgaacacagtggacatctcagaacgagaaaaggtggcgcagctaagaagtctctac
aagaaggctgggcttggcaaggagaaacgccaagtcacctatgttgtagctaaaaaaggt
gtgggccgcaaggtgaggcggccagctggagttagaggtcatttcaaggtggtggactcc
aggatgaagaaagatcagcgagcacaacaacgtaaagagcagaagaaaaaacagaagcgg
aaatga
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