Sciurus carolinensis (gray squirrel): 124979791
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Entry
124979791 CDS
T08117
Name
(RefSeq) 26S proteasome regulatory subunit 8 isoform X1
KO
K03066
26S proteasome regulatory subunit T6
Organism
ncar
Sciurus carolinensis (gray squirrel)
Pathway
ncar03050
Proteasome
ncar05010
Alzheimer disease
ncar05012
Parkinson disease
ncar05014
Amyotrophic lateral sclerosis
ncar05016
Huntington disease
ncar05017
Spinocerebellar ataxia
ncar05020
Prion disease
ncar05022
Pathways of neurodegeneration - multiple diseases
ncar05169
Epstein-Barr virus infection
Brite
KEGG Orthology (KO) [BR:
ncar00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03050 Proteasome
124979791
09160 Human Diseases
09172 Infectious disease: viral
05169 Epstein-Barr virus infection
124979791
09164 Neurodegenerative disease
05010 Alzheimer disease
124979791
05012 Parkinson disease
124979791
05014 Amyotrophic lateral sclerosis
124979791
05016 Huntington disease
124979791
05017 Spinocerebellar ataxia
124979791
05020 Prion disease
124979791
05022 Pathways of neurodegeneration - multiple diseases
124979791
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03051 Proteasome [BR:
ncar03051
]
124979791
Proteasome [BR:
ncar03051
]
Eukaryotic proteasome
Regulatory particles
PA700 (19S proteasome)
ATPase subunits
124979791
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA
AAA_lid_3
Prot_ATP_ID_OB_C
AAA_2
AAA_5
AAA_16
AAA_22
AAA_lid_PRS2_C
nSTAND3
PRS7_OB
RuvB_N
TIP49
AAA_18
AAA_28
Mg_chelatase
AAA_3
AAA_33
NPHP3_N
AAA_14
Parvo_NS1
ATPase
PhoH
AAA_17
FapA
IstB_IS21
AAA_24
AAA_7
AAA_25
DUF815
DUF7006
Sigma54_activat
bpMoxR
DUF5906
ABC_tran
RNA_helicase
Zeta_toxin
AAA_19
AAA_11
TsaE
HR1
Prominin
Motif
Other DBs
NCBI-GeneID:
124979791
NCBI-ProteinID:
XP_047400469
LinkDB
All DBs
Position
3:complement(14719663..14724410)
Genome browser
AA seq
406 aa
AA seq
DB search
MALDGTEQMELEEGKAGSGLRQYYLSKIEELQLIVNDKSQNLRRLQAQRNELNAKVRLLR
EELQLLQEQGSYVGEVVRAMDKKKVLVKVHPEGKFVVDVDKNIDINDVTPNCRVALRNDS
YTLHKILPNKVDPLVSLMMVEKVPDSTYEMIGGLDKQIKEIKEVIELPVKHPELFEALGI
AQPKGVLLYGPPGTGKTLLARAVAHHTDCTFIRVSGSELVQKFIGEGARMVRELFVMARE
HAPSIIFMDEIDSIGSSRLEGGSGGDSEVQRTMLELLNQLDGFEATKNIKVIMATNRIDI
LDSALLRPGRIDRKIEFPPPNEEARLDILKIHSRKMNLTRGINLRKIAELMPGASGAEVK
GVCTEAGMYALRERRVHVTQEDFEMAVAKVMQKDSEKNMSIKKLWK
NT seq
1221 nt
NT seq
+upstream
nt +downstream
nt
atggcgcttgacgggacagagcagatggaacttgaagaaggaaaagcaggcagcggactc
cgtcaatattatctgtccaagattgaagaactccagctgattgtgaatgataagagccag
aaccttcggcggctacaggcacagaggaatgaactaaatgcaaaagttcgtctactgcgg
gaggagctacagctgctacaggaacaaggctcctatgtgggagaagtagtccgggccatg
gataagaagaaagtgttggtcaaggtacatcccgagggcaagtttgttgtagatgtggac
aagaacatcgacatcaatgatgtgacacccaattgccgggtggctctaagaaatgacagc
tacactctgcacaagatcctacccaacaaggtggaccctctggtgtcactgatgatggtg
gagaaggtgccagattcaacttacgaaatgattggtggactggacaaacagatcaaagag
atcaaagaagtgattgagctgccagtgaagcaccctgagctctttgaagcattgggcatt
gcacagcccaagggagtgctgctgtatggacccccaggcacagggaagacacttttggcc
cgggctgtggctcatcatacagactgtacctttattcgtgtctctggttcagaattagtg
cagaaattcatcggagaaggggcaagaatggtgagggaactgtttgtcatggcacgagaa
catgctccatctattatcttcatggatgaaattgactccattggctcttcacggctggaa
gggggctctggaggggacagtgaagtgcagcgcacaatgctggagctgctcaaccagctg
gatggctttgaggccaccaagaatattaaggttatcatggctactaataggattgatatc
ctggattctgcactgcttcgccctgggcgcattgacagaaaaattgaattcccacccccc
aatgaggaggcccgactggacattttgaagattcactctcggaaaatgaatctgacccgg
gggatcaacctgagaaaaattgctgagctgatgccaggagcatcaggggctgaagtgaag
ggtgtatgcacagaggctggcatgtatgcactacgggaacggcgagtccatgtcacccag
gaggactttgagatggctgtcgccaaggtcatgcagaaagatagtgagaaaaacatgtcc
atcaagaaactttggaagtga
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