Sciurus carolinensis (gray squirrel): 124979811
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Entry
124979811 CDS
T08117
Name
(RefSeq) DDB1- and CUL4-associated factor 7
KO
K11805
DDB1- and CUL4-associated factor 7
Organism
ncar
Sciurus carolinensis (gray squirrel)
Pathway
ncar03083
Polycomb repressive complex
Brite
KEGG Orthology (KO) [BR:
ncar00001
]
09120 Genetic Information Processing
09126 Chromosome
03083 Polycomb repressive complex
124979811
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
ncar04121
]
124979811
03036 Chromosome and associated proteins [BR:
ncar03036
]
124979811
Ubiquitin system [BR:
ncar04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
Cul4 complex
Target recognizing subunit (DCAF)
124979811
Chromosome and associated proteins [BR:
ncar03036
]
Eukaryotic type
Histone modification proteins
Polycomb repressive complex (PRC) and associated proteins
Noncanonical PRC1 (PRC1.3/1.5)
124979811
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Beta-prop_THOC3
Beta-prop_WDR5
WD40_Prp19
Beta-prop_EIPR1
WD40_CDC20-Fz
WD40
Beta-prop_WDR3_1st
WD40_WDHD1_1st
Beta-prop_RIG_2nd
Beta-prop_Aladin
Beta-prop_TEP1_2nd
Beta-prop_WDR36-Utp21_2nd
WD40_RFWD3
Beta-prop_WDR3_2nd
Beta-prop_CAF1B_HIR1
MIOS_WD40
Beta-prop_EML_2
WDR55
EIF3I
WD40_Gbeta
Beta-prop_WDR41
WD_LRWD1
WD40_MABP1-WDR62_2nd
Motif
Other DBs
NCBI-GeneID:
124979811
NCBI-ProteinID:
XP_047400532
LinkDB
All DBs
Position
3:complement(14923001..14950608)
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AA seq
342 aa
AA seq
DB search
MSLHGKRKEIYKYEAPWTVYAMNWSVRPDKRFRLALGSFVEEYNNKVQLVGLDEESSEFI
CRNTFDHPYPTTKLMWIPDTKGVYPDLLATSGDYLRVWRVGETETRLECLLNNNKNSDFC
APLTSFDWNEVDPYLLGTSSIDTTCTIWGLETGQVLGRVNLVSGHVKTQLIAHDKEVYDI
AFSRAGGGRDMFASVGADGSVRMFDLRHLEHSTIIYEDPQHHPLLRLCWNKQDPNYLATM
AMDGMEVVILDVRVPCTPVARLNNHRACVNGIAWAPHSSCHICTAADDHQALIWDIQQMP
RAIEDPILAYTAEGEINNVQWASTQPDWIAICYNNCLEILRV
NT seq
1029 nt
NT seq
+upstream
nt +downstream
nt
atgtcccttcacggcaaacggaaggagatctacaagtatgaagcgccctggaccgtctac
gccatgaactggagcgtgcggccagacaagcgctttcgcctggcgctgggcagcttcgtg
gaggaatacaacaacaaggttcagcttgttggtttagatgaggaaagttcggagttcatt
tgccgaaacacctttgaccatccgtaccccaccacaaaactcatgtggatccccgacaca
aagggagtctatccagacctactggcgacaagtggtgactatctccgagtgtggagggtt
ggagaaacagagaccagactggaatgtttgctaaacaataataagaactcagatttctgt
gcccccctgacctcctttgactggaatgaggtggatccttatcttttaggtacctcaagc
attgatacgacttgcaccatctggggactggagacagggcaggtgttggggcgagtgaat
cttgtgtctggccatgtgaagacccaactgatcgcccatgacaaagaggtgtatgatatt
gcgtttagccgagctgggggtggcagggatatgtttgcctctgtgggtgccgatggctca
gtgcgtatgtttgacctccgccatctggaacacagcactatcatttatgaagacccacag
catcacccactgcttcgcctctgctggaacaagcaggaccctaactatctggccaccatg
gccatggacggaatggaggtggtgattctggatgtccgagttccctgcacacctgttgcc
aggttaaacaaccaccgagcatgtgtcaatggcattgcttgggccccacattcatcctgc
cacatctgcactgcagcggatgaccatcaggctctcatctgggacatccagcaaatgccc
cgggccatcgaggatcctatcctggcctacacagccgaaggagagatcaacaacgtgcag
tgggcatccactcagcctgactggattgccatctgctacaacaactgcctggagatactc
cgagtgtag
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