Sciurus carolinensis (gray squirrel): 124979830
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Entry
124979830 CDS
T08117
Name
(RefSeq) rab-interacting lysosomal protein-like isoform X1
KO
K13883
Rab-interacting lysosomal protein
Organism
ncar
Sciurus carolinensis (gray squirrel)
Pathway
ncar04145
Phagosome
ncar05132
Salmonella infection
Brite
KEGG Orthology (KO) [BR:
ncar00001
]
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagosome
124979830
09160 Human Diseases
09171 Infectious disease: bacterial
05132 Salmonella infection
124979830
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ncar04131
]
124979830
Membrane trafficking [BR:
ncar04131
]
Endosome - Lysosome transport
Rab GTPases and associated proteins
Rab associated proteins
124979830
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RILP
RH1
V_ATPase_I
Motif
Other DBs
NCBI-GeneID:
124979830
NCBI-ProteinID:
XP_047400553
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All DBs
Position
3:61744136..61747577
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AA seq
366 aa
AA seq
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MEPRRAAPGPPGWRPRVPSGSATAAELVYHLAGALGTELQLLARRFGPEAAAGLVPLVVR
ALELLEKAAVGPSPDSLQVSAQQAELELRWLRQENEHLRRELRSPQEERALLQQLKEVTD
RQRDELRAYNRDLLQRSQETEALQEQLQRLLLVNVELRHKLAAVQAQLRAAQDRERAHEL
PLKSPDKHAEEQRRKPDPITPEDPVYTPLQPEHPPEAGQCGLSREEVEQILQERNELKTN
VFLLKEELAYFQRELLTDHRVPGLLLEAMKVAVRKQRKKIKAKMLGTPEEAESSDDEDGS
WLLLSSNKGDDPPPPESRIQSFFGSWFQNEAEVPEAKTSNTTPSELGGEEETPHLEPVGT
PPAPNS
NT seq
1101 nt
NT seq
+upstream
nt +downstream
nt
atggagcctaggagggcggcgcctgggccacccggctggaggcctcgagtgccctcaggg
tccgcgacggcagctgagctcgtgtaccatctagcgggggccctgggcactgagctgcaa
ctgctggctcgccgttttggcccggaggcagcggcggggctggtgccgcttgtggtgcgg
gcgctggagctcctggaaaaggctgcggttgggccctccccggactcgctgcaggtgtct
gcacagcaggccgaactggagctgcggtggttgaggcaggagaacgagcacctccgtaga
gaactacgctcgccgcaggaggagcgagcgctgctgcagcagctcaaggaggtgacggac
agacagcgggacgagctccgggcttataaccgcgacctgctgcaacgcagccaggagacg
gaggctttgcaggagcagctgcagcgcctcctgctggtgaatgtggagctgcgacacaag
ctggcagccgtgcaagcccagctgcgggcagcacaggaccgcgagagggcgcacgagcta
ccactgaaaagccctgacaagcatgctgaagagcagaggcggaagcctgatccaataacc
cctgaggacccggtgtataccccactgcagccagagcaccctccagaggcagggcagtgt
ggcttaagcagggaggaggttgagcagatccttcaagagcggaatgaactcaaaaccaat
gtgttcctgctcaaggaggagttggcctacttccagcgggaattgctcacagaccacaga
gtccctgggcttctgcttgaagccatgaaggtggctgtcaggaagcagcggaaaaagatc
aaggccaagatgttagggacaccagaggaagcagaaagcagtgatgatgaggatggctca
tggctcctgctctccagcaataaaggagatgaccctccaccccctgaatccagaatacag
agtttctttggctcgtggtttcagaatgaagcagaggtcccagaagctaagaccagcaac
acaactcccagtgaactagggggagaagaggaaaccccacacttggagcctgtgggcacc
cctccagcccccaactcctga
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