Sciurus carolinensis (gray squirrel): 124979835
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Entry
124979835 CDS
T08117
Name
(RefSeq) voltage-dependent L-type calcium channel subunit beta-4 isoform X1
KO
K04865
voltage-dependent calcium channel beta-4
Organism
ncar
Sciurus carolinensis (gray squirrel)
Pathway
ncar04010
MAPK signaling pathway
ncar04260
Cardiac muscle contraction
ncar04261
Adrenergic signaling in cardiomyocytes
ncar04921
Oxytocin signaling pathway
ncar05410
Hypertrophic cardiomyopathy
ncar05412
Arrhythmogenic right ventricular cardiomyopathy
ncar05414
Dilated cardiomyopathy
Brite
KEGG Orthology (KO) [BR:
ncar00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
124979835
09150 Organismal Systems
09152 Endocrine system
04921 Oxytocin signaling pathway
124979835
09153 Circulatory system
04260 Cardiac muscle contraction
124979835
04261 Adrenergic signaling in cardiomyocytes
124979835
09160 Human Diseases
09166 Cardiovascular disease
05410 Hypertrophic cardiomyopathy
124979835
05412 Arrhythmogenic right ventricular cardiomyopathy
124979835
05414 Dilated cardiomyopathy
124979835
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
ncar04040
]
124979835
Ion channels [BR:
ncar04040
]
Voltage-gated cation channels
Calcium channel, voltage-gated (Cav)
124979835
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Guanylate_kin
VGCC_beta4Aa_N
SH3_1
Motif
Other DBs
NCBI-GeneID:
124979835
NCBI-ProteinID:
XP_047400561
EnsemblRapid:
ENSSCRG00010004765
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Position
3:complement(103098525..103345370)
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AA seq
519 aa
AA seq
DB search
MSSSYAKNGTADGPHSPTSQVARGTTTRRSRLKRSDGSTTSTSFILRQGSADSYTSRPSD
SDVSLEEDREAIRQEREQQAAIQLERAKSKPVAFAVKTNVSYCGALDEDVPVPSTAISFD
AKDFLHIKEKYNNDWWIGRLVKEGCEIGFIPSPLRLENIRIQQEQKRGRFHGGKSSGNSS
SSLGEMVSGTFRATPTSTAKQKQKVTEHIPPYDVVPSMRPVVLVGPSLKGYEVTDMMQKA
LFDFLKHRFDGRISITRVTADISLAKRSVLNNPSKRAIIERSNTRSSLAEVQSEIERIFE
LARSLQLVVLDADTINHPAQLIKTSLAPIIVHVKVSSPKVLQRLIKSRGKSQSKHLNVQL
VAADKLAQCPPEMFDVILDENQLEDACEHLGEYLEAYWRATHTTSSTPMTPLLGRNLGST
ALSPYPTAISGLQSQRMRHSNHSTENSPIERRSLMTSDENYHNERARKSRNRLSSSSQHS
RDHYPLVEEDYPDSYQDTYKPHRNRGSPGGYSHDSRHRL
NT seq
1560 nt
NT seq
+upstream
nt +downstream
nt
atgtcctcctcctacgccaagaacggtaccgcggacgggccgcactcccccacctctcag
gtggcccgaggcaccacgacccggaggagcaggttgaaaagatccgatggcagtaccact
tcgaccagcttcatcctcagacagggttcagcggattcctacacaagcaggccatctgac
tccgatgtctctttggaagaggatcgggaagcaattcgacaggagagagaacagcaagca
gctatccagcttgagagagcaaagtccaaacctgtagcatttgctgtgaagacgaatgtg
agctattgtggagctctggatgaggatgtgcctgttccgagcacagccatctcctttgat
gccaaggactttctacacattaaagagaaatacaacaatgattggtggatagggaggctg
gtgaaagagggctgtgagattggcttcatcccaagtccactcagattggagaacatacgg
attcagcaagaacagaaacgaggacgttttcacggagggaaatcaagtggaaattcctca
tcaagtctgggagaaatggtatcagggacatttcgagcaactcccacatcaacagcaaaa
cagaagcaaaaagtgacggagcacattcctccttacgatgttgtgccatcaatgcgtccg
gtggtgttagtggggccgtcactgaaaggttatgaggtaacagacatgatgcagaaagcc
ctctttgatttcctgaagcacaggtttgatgggaggatatcaataacgagagtgacagct
gacatttctcttgctaagaggtctgtcctaaataatcccagcaagagagcaataattgaa
cgttcgaacacccggtccagcttagcggaagtacaaagtgaaattgaaagaatctttgag
ttggcaagatctttgcaactggttgttctcgatgcagacaccatcaatcacccagcacaa
cttataaagacttccttagctccaattattgttcatgtaaaagtctcatctccaaaggtt
ttacagcgattgattaaatctagaggaaaatcccaaagtaaacacttgaatgttcaactg
gtagcagctgataaactcgcacagtgccctcctgaaatgtttgatgttatattggatgag
aatcagcttgaggatgcgtgtgaacatctaggagagtaccttgaggcgtactggcgggcc
acccacacaaccagcagcacccccatgaccccgctgctggggaggaatttgggctccaca
gcactctcaccatatcctacagcaatttccgggttacagagtcagcgaatgaggcacagc
aaccactccacagagaactctccaattgaaagacgaagtctaatgacctctgatgaaaat
tatcacaacgagagggctcggaagagtaggaaccgcttgtcttccagttcccagcatagc
cgagatcattaccctcttgtggaagaagattatcctgactcataccaggacacttacaaa
cctcacaggaaccgaggctcacctgggggatacagccatgactcccgacataggctttga
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