Sciurus carolinensis (gray squirrel): 124979862
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Entry
124979862 CDS
T08117
Name
(RefSeq) keratin, type I cytoskeletal 28
KO
K07604
type I keratin, acidic
Organism
ncar
Sciurus carolinensis (gray squirrel)
Pathway
ncar04915
Estrogen signaling pathway
ncar05150
Staphylococcus aureus infection
Brite
KEGG Orthology (KO) [BR:
ncar00001
]
09150 Organismal Systems
09152 Endocrine system
04915 Estrogen signaling pathway
124979862
09160 Human Diseases
09171 Infectious disease: bacterial
05150 Staphylococcus aureus infection
124979862
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
ncar04812
]
124979862
04147 Exosome [BR:
ncar04147
]
124979862
Cytoskeleton proteins [BR:
ncar04812
]
Eukaryotic cytoskeleton proteins
Intermediate filaments
Intermediate filaments
Types I and II: Acidic and basic keratins
124979862
Exosome [BR:
ncar04147
]
Exosomal proteins
Exosomal proteins of epithelial cells
124979862
Exosomal proteins of other body fluids (saliva and urine)
124979862
Exosomal proteins of colorectal cancer cells
124979862
Exosomal proteins of melanoma cells
124979862
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Filament
TPR_MLP1_2
Bacillus_HBL
Motif
Other DBs
NCBI-GeneID:
124979862
NCBI-ProteinID:
XP_047400627
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All DBs
Position
3:21771690..21781054
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AA seq
449 aa
AA seq
DB search
MSLRFSGGSWRTGVQSATGSARPPSGGFGGSSACGSSVAGGGFSCALGAPNVGSHAGGAL
GNERGLLSGNEKVTMQNLNDRLASYLDNVRALEEANAELERKIKSWYEKYGPGSCRGLDH
DYSRYHLTIEDLKNKIISSTAANANVILQIDNARLAADDFRLKYENELTLHQNVEADING
LRRVLDELTLCRTDQELQFESLSEEMTYLKKNHEEEMKALQCAAGGNVNVEMNAAPGVDL
TVLLNNMRAEYEALAEQNRRDAEAWFQEKSATLQQQISDDTGAATSARTELTEMKRTLQT
LEIELQSLLATKRSLECSLTETEGNYCTQLAQIQAQIGALEEQLHQVRTETEGQKLEYEQ
LLDIKAHLEKEIETYCRLIDGDGNSCSKSKSFGSESSGNSSKDLSKTTLVKTVVEEIDQR
GKVLSSRIQSIEEKTSKIANGKTEQRVPF
NT seq
1350 nt
NT seq
+upstream
nt +downstream
nt
atgtcgctccggttttctggtggttcctggcgcactggcgtacagtctgcaactgggtca
gccagaccacccagcggaggatttggaggcagcagtgcatgcggcagctctgtggctggt
ggcggtttttcctgtgccctgggcgcccccaatgttgggagccatgctggaggtgccctt
ggaaatgaacggggactcctctctgggaatgagaaggtgaccatgcaaaacctcaacgac
cgcctggcctcctacctggataatgtgcgagctctggaggaagcaaatgcagaattggag
agaaagatcaagagttggtacgaaaaatatggccccggatcttgccgcggactcgatcat
gactacagcagatatcacctaaccatcgaggatcttaaaaataagataatctcttccact
gctgctaatgccaatgtcattctgcagattgataatgccagactggctgctgatgatttc
cggctaaagtatgaaaatgagctcacccttcaccaaaacgtagaggcagacatcaacggg
ttaaggcgcgtcctggatgagctgacgctttgcaggaccgaccaggagctgcagttcgaa
tcccttagtgaggagatgacctacctcaagaagaaccacgaggaggaaatgaaggctctg
cagtgcgcggcgggaggcaacgtgaacgtggagatgaacgccgcccccggggtggacctc
acggtgctgctcaacaacatgcgcgccgagtacgaggccctggctgagcagaaccggcgg
gacgccgaggcctggttccaggagaagagcgccacgctgcagcagcagatctccgacgac
actggcgcagccacctccgccaggaccgagctgacagagatgaagcgcaccctgcagacg
ctggagatcgagctgcagtccctcctggcaacgaagcgctccctggagtgctccttgaca
gaaaccgagggcaactactgcacgcagctggctcagatccaggctcagatcggggccctg
gaggagcagctgcaccaggtcaggacggagaccgagggccagaaactggagtatgagcag
ctcctggacatcaaggcccacctggagaaggaaattgagacctactgccgcctgatagat
ggagacggaaattcatgctccaaatcaaaaagctttggatcagaaagctcaggaaattca
tctaaagatttatccaaaaccacactggtaaagacggtggtcgaagagatagatcaacgt
ggtaaagttctttcatccagaattcaatccattgaggaaaagacatctaaaatagccaat
ggcaagacagaacaaagggttcccttctag
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