Sciurus carolinensis (gray squirrel): 124979896
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Entry
124979896 CDS
T08117
Name
(RefSeq) transmembrane channel-like protein 6 isoform X1
KO
K21988
transmembrane channel-like protein
Organism
ncar
Sciurus carolinensis (gray squirrel)
Brite
KEGG Orthology (KO) [BR:
ncar00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
ncar02000
]
124979896
03037 Cilium and associated proteins [BR:
ncar03037
]
124979896
Transporters [BR:
ncar02000
]
Other transporters
Pores ion channels [TC:
1
]
124979896
Cilium and associated proteins [BR:
ncar03037
]
Other cilia and associated proteins
Stereociliary proteins
124979896
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TMC
DUF2254
DUF3671
Motif
Other DBs
NCBI-GeneID:
124979896
NCBI-ProteinID:
XP_047400717
LinkDB
All DBs
Position
3:3817198..3832862
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AA seq
837 aa
AA seq
DB search
MAQPRVLVLDVPETPGDQDQEPSPYEESEVHDSFHQLIQEQSQLAAEEELELQQRQLVAG
ALGPPGSGHQTLVGPGGAPVHSTATLRILASMPSRTIGRSRGAIISQYYNRTVKLRRRGS
RPLLGNMVRSARPSLRLYDLELDPATLEEDEKRSLLVKELQGLSVAQRDHVLRGMPLNLA
EKRCLREKSQVQRGKRRGPQDRGGVFSCCSRLRYACILALHSLGLALLSGLHAVRPWRYA
LKQIGGQFGSSVLSYFLFLKTLLAFNALLLLLPLAFLVGVQAAFPPEPPGPAPAFTGLEL
LTGGGCFTHTVMYYGYYSNTTLNQLCVPPRHGDQCSPRASSLPYSMPLAYLFTMGAAFFI
TCITLVYSMSHAFGESYRVGSTKGVHAITVFCSWDYKVTEKRASRLQQDNLRTQLKELLA
EWQLHRSPRSLCGRLRRVVTLGLAWLLCLGTMLGCSVAVFVFSEVMIQSPVSAGQEVRLL
ALPLVVSLLNLGAPYLFRGLAALEGHESPGLEVYVAICRNLILKMAILGILCYHWLGRRV
ATLQDQCWEDFVGQELYRFMVMDFLFALLDTLFGELVWRLISERKLKRRRKPEFDIARNV
LDLIYGQTLTWLGVLFSPLLPAVQVLRLLLLFLVKKASLMANCQAPRRPWLASHMSTVFL
TLLCFPSFLGAAIFLCYAVWQVKPSSTCGPFRTLDTMYEAGRVWVRYLERAGPGASWVPW
LHQYLVESTFFLFLASALLLAIIYLNIQVVKGQRKVISLLKEQIRNEGEDKIFLINRLHS
VYERKERSRAGRNEATMPPALHADGRDTWWDSERPCTFSQHPQLHSVTTAWQAETRT
NT seq
2514 nt
NT seq
+upstream
nt +downstream
nt
atggcccagccacgggtcttggtcctcgatgtccctgagactccaggggaccaggaccag
gagcccagcccctatgaggagagtgaggtgcatgactcctttcaccagctcatccaagag
cagagccagctggcggccgaggaggagctggagctgcagcagaggcagctggtggctgga
gccctggggcccccaggtagtggtcaccagaccctcgtggggccagggggtgcccccgtc
catagcacggccacactccgcatcttggccagcatgcccagtcgcaccattggccgcagc
cggggggccatcatctcccagtactacaaccgcacagtgaagctgcggcgccggggcagc
cggcccctgcttggaaacatggtgcgctcagcccgacccagcctccgcctgtacgacctg
gagctggaccccgccaccctcgaggaggacgagaagagaagcctcctggtgaaggagctt
cagggcctgtcggtggcccagcgggaccacgtgcttcgggggatgcccttgaacttggct
gagaaacgctgcctgcgagagaagagccaggtccagagggggaagcggaggggcccgcag
gaccgcgggggtgtcttctcctgctgcagccggctcagatatgcctgcatcctggccctg
catagcctggggctggccctgctctcaggcctgcatgccgtccggccctggcgctacgca
ctgaagcaaatcggaggccagtttggctccagcgtgctctcctacttcctgttcctcaag
accctgctggccttcaatgcgctgctgctgctgctgcctctggccttcctcgtgggcgtg
caggcggccttcccgccagagccgccgggccctgcccctgccttcacaggcctggagctc
ctcacaggcgggggctgcttcacccacaccgtcatgtactacggctactacagcaacacc
acgctgaaccagctgtgtgtccccccacggcatggcgaccagtgcagccccagggccagc
agccttccctacagtatgcccctggcctacctcttcactatgggagcagccttcttcatc
acctgcatcaccttggtgtacagcatgtcgcatgcttttggggagagctaccgagtgggc
agcaccaagggtgtccacgccatcaccgttttctgctcctgggactacaaagtgactgag
aagcgggcctctcgcctccagcaggacaacctccgcacccagctgaaggagctgctggct
gagtggcagctgcaccggagcccccggagcctgtgcgggaggctgcggcgggtggtcacg
ctggggctggcgtggctgctgtgtctggggaccatgttgggctgctccgtggccgtcttc
gtcttctcagaggtcatgatccagagcccggtgtccgctggccaggaggtgaggttgctg
gccctgcccctggtggtctccctcctcaacctgggggccccgtacctgttccgtggcctg
gccgccctggaggggcacgagtccccggggctggaggtgtacgtggccatctgcaggaac
ctcatcctcaagatggccatcctaggcattctttgctaccactggctgggccgcagggtg
gctaccctgcaggaccagtgctgggaggactttgtgggccaggagctctaccggttcatg
gtgatggacttcctctttgcactgctcgacacgctctttggagagctggtgtggaggctc
atctcagagaggaagctcaagaggaggcggaaacctgagttcgacattgcgaggaatgtt
ctggacctgatttacgggcagactctgacctggctgggggtcctcttctcacctctgctg
ccggccgtgcaggtcctcaggctgctgctcctcttcctggtcaagaaggccagcctgatg
gccaactgccaagctccacgcaggccctggctggcctcgcacatgagcaccgtcttcctc
acactgctctgcttcccctccttcctgggtgccgccatcttcctctgctatgctgtgtgg
caggtgaagccctccagcacctgcggccccttccggaccctggacactatgtatgaggca
ggcagggtgtgggtgcgctacctggagagggcgggccccggggcctcctgggtgccctgg
ctgcaccagtacctggtggagagcaccttcttcctcttcctggcgtctgccctgctgctg
gccatcatctatctcaacatccaggtggtgaagggtcagcggaaggtcatctccctcctc
aaggagcagatccgcaatgagggggaagacaaaatcttcttgatcaacaggcttcactcc
gtctacgagaggaaggagcggagcagggctggtagaaacgaggccacgatgccccctgcc
ctgcatgcagacggaagggacacctggtgggacagcgagaggccttgcacgttctcccag
cacccccagttgcactctgtcaccacagcctggcaggcagagacgaggacctga
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