KEGG T08117: 124979906

Sciurus carolinensis (gray squirrel): 124979906

Entry

124979906         CDS       T08117

Name

(RefSeq) LOW QUALITY PROTEIN: integrin alpha-4-like

K06483

integrin alpha 4

Organism

ncar Sciurus carolinensis (gray squirrel)

Pathway

ncar04151

PI3K-Akt signaling pathway

ncar04510

Focal adhesion

ncar04512

ECM-receptor interaction

ncar04514

Cell adhesion molecules

ncar04640

Hematopoietic cell lineage

ncar04670

Leukocyte transendothelial migration

ncar04672

Intestinal immune network for IgA production

ncar04810

Regulation of actin cytoskeleton

ncar04820

Cytoskeleton in muscle cells

ncar05135

Yersinia infection

ncar05140

Leishmaniasis

ncar05165

Human papillomavirus infection

ncar05410

Hypertrophic cardiomyopathy

ncar05412

Arrhythmogenic right ventricular cardiomyopathy

ncar05414

Dilated cardiomyopathy

Brite

KEGG Orthology (KO) [BR:ncar00001]
09130 Environmental Information Processing
  09132 Signal transduction
   04151 PI3K-Akt signaling pathway
    124979906
  09133 Signaling molecules and interaction
   04512 ECM-receptor interaction
    124979906
   04514 Cell adhesion molecules
    124979906
09140 Cellular Processes
  09144 Cellular community - eukaryotes
   04510 Focal adhesion
    124979906
  09142 Cell motility
   04820 Cytoskeleton in muscle cells
    124979906
   04810 Regulation of actin cytoskeleton
    124979906
09150 Organismal Systems
  09151 Immune system
   04640 Hematopoietic cell lineage
    124979906
   04670 Leukocyte transendothelial migration
    124979906
   04672 Intestinal immune network for IgA production
    124979906
09160 Human Diseases
  09172 Infectious disease: viral
   05165 Human papillomavirus infection
    124979906
  09171 Infectious disease: bacterial
   05135 Yersinia infection
    124979906
  09174 Infectious disease: parasitic
   05140 Leishmaniasis
    124979906
  09166 Cardiovascular disease
   05410 Hypertrophic cardiomyopathy
    124979906
   05412 Arrhythmogenic right ventricular cardiomyopathy
    124979906
   05414 Dilated cardiomyopathy
    124979906
09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:ncar04147]
    124979906
   04515 Cell adhesion molecules [BR:ncar04515]
    124979906
   04090 CD molecules [BR:ncar04090]
    124979906
Exosome [BR:ncar04147]
Exosomal proteins
  Exosomal proteins of haemopoietic cells  (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
   124979906
  Exosomal proteins of other cancer cells
   124979906
Cell adhesion molecules [BR:ncar04515]
Integrins
  Integrin alpha subunits
   124979906
CD molecules [BR:ncar04090]
Proteins
  124979906

SSDB

Motif

Pfam:

Integrin_A_Ig_1 Integrin_A_Ig_2 Integrin_A_Ig_3 FG-GAP FG-GAP_3 Integrin_alpha CATSPERG_C DUF11

Other DBs

NCBI-GeneID:

124979906

NCBI-ProteinID:

XP_047400749

LinkDB

Position

3:129839463..129914630

AA seq 1032 aa
MAAEARRGPGPRGAAVGEAVMLLLCLGVPTGHPYNVDTESALLYQGPSGTLFGYSVVLHS
HGANRWLVVGAPTANWLANASVVKPGAIYKCRIGKNPGRTCEQLQLGSPHGEPCGKTCLE
ERDNQWLGVTLSRQPGDNGSIVTCGHRWKNVFYIKNENKLPTGICYGMPSNLRTELSKRM
TPCYQDYVKKFGENFASCQAGISSFYAEDLIVMGAPGSSYWTGSLFIYNITTNKYKAFLD
KDNQVKFGSYLGYSVGAGHFRSRHTTEVVGGAPQHEQIGKAYIFSIDAKELHILHEMKGK
KLGSYFGASVCAVDLNADGFSDLLVGAPMQSVIREEGRVFVYLNSGLGAVMNEMETVLIG
SDKYASRFGESIVNLGDIDNDGFEDVAIGAPQEDDLRGAIYIYNGRVDGISPSFSQRIEG
LQISKSLSMFGQSISGQIDADNNGYMDVAVGAFRSDSAVLLRTRPVVIVEASLSHPESVN
RTKFDCVENGLPSVCMDLTLCFSYKGKEVPGYIVLFYNMSLDVNRKAESPSRFYFSANGT
SDLITGSIQVSSKRANCRTHQAFMRKDVRDILTPIQIEAAYHLGRHVISKRSTEEFPPLQ
PILQQKKEKDLIKKMINFARFCAYENCSADLQVSAKIGFLKPYENKTYLAVGGMKTLMLN
VSLFNAGDDAYETTLHVKLPTGLYFIKILELEEKQINCEVTDNSGIVKLDCSLGYXYVDH
LSRIDISFLLDVSSLNRAEEDLSITVHASCENEEVDSLQDNRVTLAIPLRYEVMLTIHGF
VNPTSFVYGSSEENEXETCMAEKMNFTFHVINTGISMAPNVSVEIMVPNSFIPQTDKLFN
ILDVQTTIGQCHFKNYERQCASELQKGAVETLRGIFKFLSKTDKRLLYCMKADPHCLNFV
CHFGKMESGKEASVHIQLEGRPSILEMDATSSLKFEXRATAFPEPHPRVIELNKDENVAH
VLLEGVHHQRPKRHFTIVIISSSLLLGLIVLLMISCAMWKAGFFKRQYKSILQEENRRDS
WSYVNSKSNEDD

NT seq 3099 nt +upstreamnt +downstreamnt
atggctgcggaagcgaggcgcggacccggtccccgaggggccgccgtcggggaagcggtg
atgctgttgctgtgcttgggggtcccgaccggccacccctacaacgtggacactgagagc
gccctgctttaccagggcccctccggcacgctcttcggctattcagtggtgctgcacagt
cacggggcgaaccgatggctcgtcgtgggggcgcccactgccaactggcttgccaatgct
tctgtggtcaaacccggggcgatttacaaatgcaggatcggaaagaatccaggccggaca
tgcgaacagctccagctgggtagccctcatggagaaccctgtggaaagacttgtttggaa
gagagagacaatcagtggttgggggttacactttccagacagccaggagataatggatcc
atcgtgacttgtgggcatagatggaaaaatgtattttacatcaagaatgaaaataagctc
cccactggcatttgctatggaatgccttctaatttacgaacagaactgagtaagagaatg
actccttgttaccaagattatgtaaaaaaatttggagaaaattttgcatcatgtcaagct
ggaatatctagtttttatgcagaggatttaattgtgatgggagccccaggatcatcttat
tggactggctctctttttatctacaatataactacaaataaatacaaggcatttttagac
aaagacaatcaagtaaaatttggaagttatttaggatactcggttggagctggtcacttt
cggagtcggcatactactgaggtagttggaggagcccctcaacatgagcagattggtaaa
gcatatatattcagcattgatgcaaaagaactacatatcttacatgaaatgaaaggtaaa
aagcttggctcatattttggagcgtctgtctgtgctgtggacctcaatgcagatggcttc
tcagacctcctcgtgggagcaccaatgcagagtgtcatcagggaagaaggaagagtgttc
gtatacctcaactctggtttgggagcagtaatgaatgaaatggaaacagtgctcattggg
agtgacaaatatgcttcaagatttggggaatccatagttaatcttggcgacattgataat
gatggatttgaagatgttgctattggtgctccacaagaagatgacttgcgaggtgctatt
tacatttacaatggccgggtagacgggatctcaccaagcttctcacagagaattgaagga
cttcaaatcagcaaatcattaagtatgtttggacagtctatatcaggacaaattgatgca
gataataatggatacatggatgtggcagttggtgcatttcggtctgattctgctgtgttg
ctaaggacaagacctgttgtgattgttgaagcatctttaagccaccctgagtcagtaaac
agaacgaaatttgactgtgttgaaaatggattgccctctgtgtgcatggatctaacactc
tgtttctcatataagggcaaagaagttccaggttacattgttttgttttataacatgagt
ttggatgtgaatagaaaggcagagtctccatctcgattttacttctctgctaatggaact
tctgacttgatcacaggaagcattcaagtatcgagcaaaagagctaattgcaggacacat
caagcatttatgcggaaagatgtgcgggacatcctcaccccgattcaaattgaagctgct
tatcaccttgggcgtcatgttatcagcaagcgcagtactgaggaattcccaccacttcag
ccaattcttcagcagaagaaagaaaaggacctgattaaaaagatgataaactttgcaagg
ttttgtgcctatgaaaattgttctgctgacttacaggtttctgcaaaaattggatttttg
aagccttatgaaaataaaacctatcttgctgttgggggtatgaagacgttaatgttgaat
gtgtccttgtttaatgctggagatgatgcttatgagaccaccctgcatgtcaagctaccc
acaggtctttacttcattaagattttagaactggaggagaagcaaataaactgtgaagta
acagataattctggcatagtgaaacttgattgcagccttggttatnnatatgtagatcat
ctctcacggatagatattagctttctcctggatgtgagctcacttaacagagcagaagag
gacctcagcatcacagtgcatgcctcctgtgaaaatgaagaagtggacagcctacaggat
aacagagtgactttagcaatacctctgagatatgaggttatgctaactattcatgggttt
gtgaacccaacttcatttgtgtatggatcaagtgaggaaaatgagncggaaacatgtatg
gcagagaaaatgaacttcactttccatgttattaacactggcattagcatggctccaaat
gttagtgtggaaataatggtaccgaattcttttattcctcaaactgataaactattcaac
attttggatgtccagacaactattggacaatgccattttaaaaattatgaaagacagtgt
gcctcggagctgcaaaagggtgcagtggagaccttgaggggcatattcaaattcctgtcg
aagaccgacaagaggctgttgtactgcatgaaagctgatccacactgtttaaattttgta
tgccattttgggaaaatggaaagtggaaaagaagccagtgttcacatccagttggaaggc
cggccatccattttggaaatggatgcaacttcatcactgaagtttgaanntagagcaaca
gcctttccagaaccacatccaagagttattgagcttaacaaggatgagaatgttgcacat
gttctactggaaggagtacatcatcaaagacccaagcgtcatttcaccatagtgattatt
tcaagtagtttgcttcttggacttattgtacttttaatgatttcttgtgctatgtggaag
gctggcttctttaaaagacaatacaaatctattctacaagaagaaaacagaagagatagt
tggagttacgtcaatagtaaaagcaatgaagatgattaa

DBGET integrated database retrieval system