KEGG   Sciurus carolinensis (gray squirrel): 124979920
Entry
124979920         CDS       T08117                                 
Name
(RefSeq) integrin alpha-3 isoform X1
  KO
K06482  integrin alpha 3
Organism
ncar  Sciurus carolinensis (gray squirrel)
Pathway
ncar04151  PI3K-Akt signaling pathway
ncar04510  Focal adhesion
ncar04512  ECM-receptor interaction
ncar04640  Hematopoietic cell lineage
ncar04810  Regulation of actin cytoskeleton
ncar04820  Cytoskeleton in muscle cells
ncar05165  Human papillomavirus infection
ncar05200  Pathways in cancer
ncar05222  Small cell lung cancer
ncar05410  Hypertrophic cardiomyopathy
ncar05412  Arrhythmogenic right ventricular cardiomyopathy
ncar05414  Dilated cardiomyopathy
Brite
KEGG Orthology (KO) [BR:ncar00001]
 09130 Environmental Information Processing
  09132 Signal transduction
   04151 PI3K-Akt signaling pathway
    124979920
  09133 Signaling molecules and interaction
   04512 ECM-receptor interaction
    124979920
 09140 Cellular Processes
  09144 Cellular community - eukaryotes
   04510 Focal adhesion
    124979920
  09142 Cell motility
   04820 Cytoskeleton in muscle cells
    124979920
   04810 Regulation of actin cytoskeleton
    124979920
 09150 Organismal Systems
  09151 Immune system
   04640 Hematopoietic cell lineage
    124979920
 09160 Human Diseases
  09161 Cancer: overview
   05200 Pathways in cancer
    124979920
  09162 Cancer: specific types
   05222 Small cell lung cancer
    124979920
  09172 Infectious disease: viral
   05165 Human papillomavirus infection
    124979920
  09166 Cardiovascular disease
   05410 Hypertrophic cardiomyopathy
    124979920
   05412 Arrhythmogenic right ventricular cardiomyopathy
    124979920
   05414 Dilated cardiomyopathy
    124979920
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:ncar04147]
    124979920
   04515 Cell adhesion molecules [BR:ncar04515]
    124979920
   04090 CD molecules [BR:ncar04090]
    124979920
Exosome [BR:ncar04147]
 Exosomal proteins
  Exosomal proteins of haemopoietic cells  (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
   124979920
Cell adhesion molecules [BR:ncar04515]
 Integrins
  Integrin alpha subunits
   124979920
CD molecules [BR:ncar04090]
 Proteins
  124979920
SSDB
Motif
Pfam: Integrin_A_Ig_3 Integrin_A_Ig_1 Integrin_A_Ig_2 FG-GAP FG-GAP_3 MLANA
Other DBs
NCBI-GeneID: 124979920
NCBI-ProteinID: XP_047400788
LinkDB
Position
3:25844123..25871181
AA seq 1066 aa
MGPGPSRAPRAPRRMLCALALMVAAGGRVASAFNLDTRFLVVKEAQNPGSLFGYSVALHR
QTERQQRYLLLAGAPRDLAVPDGHTNRTGAVYLCPLSAHKNDCERMDITEKSDPDHHIIE
DMWLGVTVASQGPAGRVLVCAHRYTQVLWSGSEDQRRMVGKCYVRGNDLELDASDDWQTY
HNEMCNSNTDYLETGMCQLGTSGGFTQNTVYFGAPGAYNWKGNSYMIQRKDWDLSEYSYK
DPEDQGNLYIGYTVQVGSAILHPTDITVVTGAPRHRHMGAVFLLSQEMGGDLRRRQVLEG
TQVGAYFGSAIALADLNNDGWKDLLVGAPYYFERKEEVGGAVYVFMNQAGTSFPAHPSLL
LHGPSRSAFGFSVASIGDINQDGFQDIAVGAPFEGLGKVYIYHSSSRGLLRQPQQVIHGE
KLGLPGLSTFGYSLSGQMDVDENFYPDLLVGSLSDHIVLLRARPVINILHRTLVARPAVL
DPTLCTATSCVQVELCFAYNQSAGNPNYRRNITLAYTLEADRDRRPPRLRFASSQSAVFH
GFFSMPEMRCQTLDLLLMDNVRDKLRPIVISMNYSLPLKMPERPRLGPRSLDAYPVLNQA
QTQENHTEVQFQKECGSDNKCDSNLQMQAAFVTEHLQRLSRLQYSRDVRKLLLSINVTNT
PSWERNGEDAHEALLTLEVPPALLLSSVRPSGACQANETILCELGNPFKRNQRMELLIAF
EVIGVTLQTRDLQVQLQLSTSSHQDDLRPMTLTLLVDYTLQASLSMVNHRLQSFFGGTVM
GESGMKTVEDVGSPLKYEFQVSPVGEGLVALGTLVLGLEWPYEVTNGKWLLYPTEITVHS
NGSWPCWPPGDLVNPLNLTLSDPGDRPPSPQRRRRELDPGGGQGPPPVTLAAAKKAKSET
VLTCATGRARCVWLECPIPDAPVVTNVTVKARVWNSTFIEDYRDFDRVRVDGWATLFLRT
SVPTINMENKTTWFSVDIDSDLVEELPAEIELWLVLVAVGAGLLLLGLIILLLWKCDFFK
RTRYYRIMPKYHAVRIREEERYPPPGSTLPTKKHWVTSWQTRDRYY
NT seq 3201 nt   +upstreamnt  +downstreamnt
atgggccccggccccagccgcgcgccccgcgccccgcgccggatgctctgcgcgctcgct
ttgatggtggcggccggcggccgcgtcgcctccgccttcaacctggacacccgattcctg
gtggtgaaggaggcccagaacccggggagcctcttcggctactcggtcgccctccaccgg
cagacagagcggcagcagcgatacctgctcctggccggtgcccccagggacctcgctgtg
cctgatggccacaccaaccggaccggtgctgtgtacctgtgccccctctctgcccacaag
aacgactgtgagcggatggacatcacggagaaaagtgaccctgaccatcacattattgag
gacatgtggcttggggtgactgtggccagccagggccctgcaggcagagtcctggtctgt
gcccaccgctacacccaggtgctgtggtcagggtcggaggaccagcggcgaatggtgggc
aagtgctacgtgcggggcaatgacctggagctggatgccagcgatgactggcagacctac
cacaacgagatgtgcaacagcaacaccgactacctggagaccggcatgtgccagctgggc
accagtggcggcttcacccagaacaccgtgtactttggcgcccccggtgcctacaattgg
aaaggaaacagctacatgattcagcggaaggactgggatttatctgagtatagttacaag
gacccagaggaccaaggaaacctctacattgggtacacagtgcaggtaggcagcgccatc
ctgcaccccacggatatcactgttgtgacgggtgccccacggcaccgacatatgggtgcc
gtcttcttgctgagccaggagatgggcggagacctgcggaggaggcaggtgctggaaggc
acgcaggtgggcgcttattttggcagcgccatcgccctggcggacctgaacaacgatggg
tggaaggacctcctggtgggtgctccctactactttgagcggaaagaagaagttgggggt
gcagtctatgtcttcatgaaccaggcgggcacctccttccctgcccacccctccctcctc
cttcatggccccagtcgctccgccttcggcttctccgtggccagcattggtgacatcaac
caggatggattccaggacattgctgtgggagcccctttcgaaggccttggcaaagtgtac
atctaccacagcagctccagggggctcctcagacagccccagcaggtaatccacggagag
aagctgggacttcctggcttgtccacctttggctactctctgagtgggcaaatggacgtg
gatgagaatttctacccggaccttctagtagggagtctgtcagaccacatcgtactgctg
cgagcccggccggtcatcaacatcctccacaggaccttggttgccaggccagctgtactg
gaccctaccctgtgcacagccacctcttgtgtgcaggtggagctgtgctttgcttacaac
cagagtgctgggaaccccaactacaggcggaacatcactctggcctataccctggaggct
gaccgggaccgccgcccgcctcggctccgctttgccagcagccagtccgctgtcttccat
ggcttcttctccatgcctgagatgcgctgccagaccctggatctgctcctgatggacaat
gtccgtgacaaactccgccccattgtcatctccatgaactactctttacccttgaagatg
cccgagcgcccccgcctgggaccgcggtctctggacgcctacccggtcctcaaccaggcg
cagacgcaggagaaccatactgaggtccagttccagaaggagtgtggatctgacaacaag
tgcgacagcaacttgcagatgcaagccgcctttgtgactgagcacctgcagaggctgagc
aggctccagtacagcagagatgtccggaaactgctcctgagcatcaatgtgaccaacacc
ccaagctgggagaggaatggggaagacgcccatgaagcactgctcaccctggaggtgcct
cctgccctgctgctgtcctcagtgcgcccatcgggggcctgccaagctaatgagaccatc
ctgtgtgaactggggaaccccttcaaacggaaccagcggatggagctgctcattgccttt
gaggtcataggggtgaccctgcaaacgagggaccttcaggtgcagctgcagctgtccaca
tcgagtcaccaggacgacctgcggcccatgaccctgactctgttggtggactacacgctc
caggcctcactcagcatggtgaatcaccggctacaaagcttctttggtgggactgtgatg
ggggagtctggcatgaaaacggtggaggatgtgggaagccctctcaaatatgaattccag
gtgagcccagtcggggagggattggtggccctggggaccctggtcctgggtctggagtgg
ccctatgaagtcaccaatggcaagtggctgctgtaccccacggagatcaccgtccacagc
aatgggtcctggccctgctggccacccggagaccttgtcaatcctctcaacctcactctc
tctgaccccggggacaggccaccatctccacagcgcaggcggcgagagctggacccaggg
ggaggccagggcccgccacctgtcactctggctgctgccaaaaaagccaagtctgagact
gtactgacctgtgccactggccgtgcccgctgcgtgtggctggagtgccccattcctgat
gcccccgtcgtcaccaacgtcacggtgaaggctcgggtatggaacagcaccttcatcgag
gattacagagactttgaccgagtcagggtagatggctgggctactctgttcctgagaacc
agcgttcccaccatcaacatggagaacaagaccacgtggttctctgtggacattgactct
gacctggtggaggagctgcccgctgagatagagctgtggctggtgcttgtggctgtgggt
gccggtctgctgctcctggggctgatcatcctcttgttgtggaagtgtgacttctttaag
cggacccgctactaccggatcatgcccaagtaccacgcggtgcgcatccgggaggaggag
cgctatccacctccagggagcactctgcccaccaagaagcactgggtgaccagctggcag
actcgggaccgatactactga

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