Sciurus carolinensis (gray squirrel): 124979920
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Entry
124979920 CDS
T08117
Name
(RefSeq) integrin alpha-3 isoform X1
KO
K06482
integrin alpha 3
Organism
ncar
Sciurus carolinensis (gray squirrel)
Pathway
ncar04151
PI3K-Akt signaling pathway
ncar04510
Focal adhesion
ncar04512
ECM-receptor interaction
ncar04640
Hematopoietic cell lineage
ncar04810
Regulation of actin cytoskeleton
ncar04820
Cytoskeleton in muscle cells
ncar05165
Human papillomavirus infection
ncar05200
Pathways in cancer
ncar05222
Small cell lung cancer
ncar05410
Hypertrophic cardiomyopathy
ncar05412
Arrhythmogenic right ventricular cardiomyopathy
ncar05414
Dilated cardiomyopathy
Brite
KEGG Orthology (KO) [BR:
ncar00001
]
09130 Environmental Information Processing
09132 Signal transduction
04151 PI3K-Akt signaling pathway
124979920
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
124979920
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
124979920
09142 Cell motility
04820 Cytoskeleton in muscle cells
124979920
04810 Regulation of actin cytoskeleton
124979920
09150 Organismal Systems
09151 Immune system
04640 Hematopoietic cell lineage
124979920
09160 Human Diseases
09161 Cancer: overview
05200 Pathways in cancer
124979920
09162 Cancer: specific types
05222 Small cell lung cancer
124979920
09172 Infectious disease: viral
05165 Human papillomavirus infection
124979920
09166 Cardiovascular disease
05410 Hypertrophic cardiomyopathy
124979920
05412 Arrhythmogenic right ventricular cardiomyopathy
124979920
05414 Dilated cardiomyopathy
124979920
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
ncar04147
]
124979920
04515 Cell adhesion molecules [BR:
ncar04515
]
124979920
04090 CD molecules [BR:
ncar04090
]
124979920
Exosome [BR:
ncar04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
124979920
Cell adhesion molecules [BR:
ncar04515
]
Integrins
Integrin alpha subunits
124979920
CD molecules [BR:
ncar04090
]
Proteins
124979920
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Integrin_A_Ig_3
Integrin_A_Ig_1
Integrin_A_Ig_2
FG-GAP
FG-GAP_3
MLANA
Motif
Other DBs
NCBI-GeneID:
124979920
NCBI-ProteinID:
XP_047400788
LinkDB
All DBs
Position
3:25844123..25871181
Genome browser
AA seq
1066 aa
AA seq
DB search
MGPGPSRAPRAPRRMLCALALMVAAGGRVASAFNLDTRFLVVKEAQNPGSLFGYSVALHR
QTERQQRYLLLAGAPRDLAVPDGHTNRTGAVYLCPLSAHKNDCERMDITEKSDPDHHIIE
DMWLGVTVASQGPAGRVLVCAHRYTQVLWSGSEDQRRMVGKCYVRGNDLELDASDDWQTY
HNEMCNSNTDYLETGMCQLGTSGGFTQNTVYFGAPGAYNWKGNSYMIQRKDWDLSEYSYK
DPEDQGNLYIGYTVQVGSAILHPTDITVVTGAPRHRHMGAVFLLSQEMGGDLRRRQVLEG
TQVGAYFGSAIALADLNNDGWKDLLVGAPYYFERKEEVGGAVYVFMNQAGTSFPAHPSLL
LHGPSRSAFGFSVASIGDINQDGFQDIAVGAPFEGLGKVYIYHSSSRGLLRQPQQVIHGE
KLGLPGLSTFGYSLSGQMDVDENFYPDLLVGSLSDHIVLLRARPVINILHRTLVARPAVL
DPTLCTATSCVQVELCFAYNQSAGNPNYRRNITLAYTLEADRDRRPPRLRFASSQSAVFH
GFFSMPEMRCQTLDLLLMDNVRDKLRPIVISMNYSLPLKMPERPRLGPRSLDAYPVLNQA
QTQENHTEVQFQKECGSDNKCDSNLQMQAAFVTEHLQRLSRLQYSRDVRKLLLSINVTNT
PSWERNGEDAHEALLTLEVPPALLLSSVRPSGACQANETILCELGNPFKRNQRMELLIAF
EVIGVTLQTRDLQVQLQLSTSSHQDDLRPMTLTLLVDYTLQASLSMVNHRLQSFFGGTVM
GESGMKTVEDVGSPLKYEFQVSPVGEGLVALGTLVLGLEWPYEVTNGKWLLYPTEITVHS
NGSWPCWPPGDLVNPLNLTLSDPGDRPPSPQRRRRELDPGGGQGPPPVTLAAAKKAKSET
VLTCATGRARCVWLECPIPDAPVVTNVTVKARVWNSTFIEDYRDFDRVRVDGWATLFLRT
SVPTINMENKTTWFSVDIDSDLVEELPAEIELWLVLVAVGAGLLLLGLIILLLWKCDFFK
RTRYYRIMPKYHAVRIREEERYPPPGSTLPTKKHWVTSWQTRDRYY
NT seq
3201 nt
NT seq
+upstream
nt +downstream
nt
atgggccccggccccagccgcgcgccccgcgccccgcgccggatgctctgcgcgctcgct
ttgatggtggcggccggcggccgcgtcgcctccgccttcaacctggacacccgattcctg
gtggtgaaggaggcccagaacccggggagcctcttcggctactcggtcgccctccaccgg
cagacagagcggcagcagcgatacctgctcctggccggtgcccccagggacctcgctgtg
cctgatggccacaccaaccggaccggtgctgtgtacctgtgccccctctctgcccacaag
aacgactgtgagcggatggacatcacggagaaaagtgaccctgaccatcacattattgag
gacatgtggcttggggtgactgtggccagccagggccctgcaggcagagtcctggtctgt
gcccaccgctacacccaggtgctgtggtcagggtcggaggaccagcggcgaatggtgggc
aagtgctacgtgcggggcaatgacctggagctggatgccagcgatgactggcagacctac
cacaacgagatgtgcaacagcaacaccgactacctggagaccggcatgtgccagctgggc
accagtggcggcttcacccagaacaccgtgtactttggcgcccccggtgcctacaattgg
aaaggaaacagctacatgattcagcggaaggactgggatttatctgagtatagttacaag
gacccagaggaccaaggaaacctctacattgggtacacagtgcaggtaggcagcgccatc
ctgcaccccacggatatcactgttgtgacgggtgccccacggcaccgacatatgggtgcc
gtcttcttgctgagccaggagatgggcggagacctgcggaggaggcaggtgctggaaggc
acgcaggtgggcgcttattttggcagcgccatcgccctggcggacctgaacaacgatggg
tggaaggacctcctggtgggtgctccctactactttgagcggaaagaagaagttgggggt
gcagtctatgtcttcatgaaccaggcgggcacctccttccctgcccacccctccctcctc
cttcatggccccagtcgctccgccttcggcttctccgtggccagcattggtgacatcaac
caggatggattccaggacattgctgtgggagcccctttcgaaggccttggcaaagtgtac
atctaccacagcagctccagggggctcctcagacagccccagcaggtaatccacggagag
aagctgggacttcctggcttgtccacctttggctactctctgagtgggcaaatggacgtg
gatgagaatttctacccggaccttctagtagggagtctgtcagaccacatcgtactgctg
cgagcccggccggtcatcaacatcctccacaggaccttggttgccaggccagctgtactg
gaccctaccctgtgcacagccacctcttgtgtgcaggtggagctgtgctttgcttacaac
cagagtgctgggaaccccaactacaggcggaacatcactctggcctataccctggaggct
gaccgggaccgccgcccgcctcggctccgctttgccagcagccagtccgctgtcttccat
ggcttcttctccatgcctgagatgcgctgccagaccctggatctgctcctgatggacaat
gtccgtgacaaactccgccccattgtcatctccatgaactactctttacccttgaagatg
cccgagcgcccccgcctgggaccgcggtctctggacgcctacccggtcctcaaccaggcg
cagacgcaggagaaccatactgaggtccagttccagaaggagtgtggatctgacaacaag
tgcgacagcaacttgcagatgcaagccgcctttgtgactgagcacctgcagaggctgagc
aggctccagtacagcagagatgtccggaaactgctcctgagcatcaatgtgaccaacacc
ccaagctgggagaggaatggggaagacgcccatgaagcactgctcaccctggaggtgcct
cctgccctgctgctgtcctcagtgcgcccatcgggggcctgccaagctaatgagaccatc
ctgtgtgaactggggaaccccttcaaacggaaccagcggatggagctgctcattgccttt
gaggtcataggggtgaccctgcaaacgagggaccttcaggtgcagctgcagctgtccaca
tcgagtcaccaggacgacctgcggcccatgaccctgactctgttggtggactacacgctc
caggcctcactcagcatggtgaatcaccggctacaaagcttctttggtgggactgtgatg
ggggagtctggcatgaaaacggtggaggatgtgggaagccctctcaaatatgaattccag
gtgagcccagtcggggagggattggtggccctggggaccctggtcctgggtctggagtgg
ccctatgaagtcaccaatggcaagtggctgctgtaccccacggagatcaccgtccacagc
aatgggtcctggccctgctggccacccggagaccttgtcaatcctctcaacctcactctc
tctgaccccggggacaggccaccatctccacagcgcaggcggcgagagctggacccaggg
ggaggccagggcccgccacctgtcactctggctgctgccaaaaaagccaagtctgagact
gtactgacctgtgccactggccgtgcccgctgcgtgtggctggagtgccccattcctgat
gcccccgtcgtcaccaacgtcacggtgaaggctcgggtatggaacagcaccttcatcgag
gattacagagactttgaccgagtcagggtagatggctgggctactctgttcctgagaacc
agcgttcccaccatcaacatggagaacaagaccacgtggttctctgtggacattgactct
gacctggtggaggagctgcccgctgagatagagctgtggctggtgcttgtggctgtgggt
gccggtctgctgctcctggggctgatcatcctcttgttgtggaagtgtgacttctttaag
cggacccgctactaccggatcatgcccaagtaccacgcggtgcgcatccgggaggaggag
cgctatccacctccagggagcactctgcccaccaagaagcactgggtgaccagctggcag
actcgggaccgatactactga
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