Sciurus carolinensis (gray squirrel): 124979940
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Entry
124979940 CDS
T08117
Name
(RefSeq) guanylate-binding protein 1-like
KO
K20899
guanylate-binding protein 1/3/4/7
Organism
ncar
Sciurus carolinensis (gray squirrel)
Pathway
ncar04621
NOD-like receptor signaling pathway
Brite
KEGG Orthology (KO) [BR:
ncar00001
]
09150 Organismal Systems
09151 Immune system
04621 NOD-like receptor signaling pathway
124979940
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Gene cluster
GFIT
Motif
Pfam:
GBP
GBP_C
RHD3_GTPase
MMR_HSR1
FlgT_C
STAT_int
Motif
Other DBs
NCBI-GeneID:
124979940
NCBI-ProteinID:
XP_047400882
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Position
1:133751839..133768313
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AA seq
591 aa
AA seq
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MASETHMLVPMCLIENVKGQLMTNQEALRILSAITQPVVVVAIVGLYRTGKSYLMNKLAG
KQKGFSLGATVQSHTKGIWMWCVPHPKMADHTLVLLDTEGLGDVEKGDNQNDSWIFALAV
LLSSTFVYNSMGTINQQAMDQLHYVTELTNRIRAKSSPDENEVEDSAEFVSFFPDFVWTL
RDFSLDLELDGQPISADEYLDNALKLKQGTGKKDKNYNLPRLCIRKFFPKKKCFIFDRPT
HRKKLARLETLHDDQLDSEFVQQVAEFCSYIFNYSKVKTLSGGIKVNGPRLESLVLTYVN
AISSGDLPCMENAVLALAQIENSAAVQKALAHYDQQMEQKVQMPTETLKELLDLHRVCER
EAIEVFIKHSFKDVDQLFQKDLAAQLETKRDDFHKQNLKASSDRCSALLQDIFSPLEEDV
KQGVYSKPGGYRLFIHKIQELKKKYYEEPRKGMQAEEILQTYLKSKEDVTDAILQTDQTL
TEKEKEIEVERVKAESAEAAAKMLEEMQKKNEQLMEQKERSYQEHVKQLTEKMEQDRAQM
QQEQEKIIAIKLQEQARLLKEGFQEESKRLHKEIQELQKSMKKPKKKCVIS
NT seq
1776 nt
NT seq
+upstream
nt +downstream
nt
atggcctcagagacccacatgctggtccccatgtgcctcattgagaatgttaaagggcaa
ctgatgaccaaccaggaagccctacggatcctgtcagccatcacacagcctgtggtggtg
gtggccatcgtgggcctctaccgcacgggcaaatcctacctgatgaacaaactcgccggg
aagcaaaagggcttctctctgggcgccacagtacagtctcacaccaaaggaatctggatg
tggtgtgtgcctcatcccaagatggcagaccacaccctagttctgcttgacaccgagggt
ctgggagatgtagagaagggcgacaaccagaatgactcctggatctttgccctggcagtc
ctcctgagcagcacttttgtgtacaacagcatgggaaccatcaaccagcaggccatggac
cagctgcactatgtgacagagctgacaaatcgaatcagagccaaatcctcccctgatgag
aacgaggttgaggattcagctgaatttgtgagcttcttcccagacttcgtgtggactctg
agagatttctccctggacttggaactagatggacagcccatctcagcagatgagtacctg
gataatgccctgaagctaaagcaaggtactggtaaaaaagacaaaaattataatctgccc
cgactctgtatccgcaagttcttcccgaaaaagaaatgctttatctttgatagacccact
catagaaagaagcttgcccggctagagactctgcatgatgatcagcttgacagtgaattt
gtgcaacaagttgcagaattctgctcatacatattcaactattccaaggttaaaactctt
tcaggaggcatcaaagtcaatggacctcgcttggagagtctagtgttgacctatgtcaat
gccatcagcagtggggatctgccctgcatggagaatgcagtcctggccctggcccagatt
gagaactcagctgctgtgcagaaggcccttgcccactatgaccagcagatggagcagaag
gtgcagatgcccacagagaccctcaaggagctgctggacctgcacagggtctgtgagaga
gaggccattgaggtcttcatcaaacattccttcaaagatgttgaccaactatttcaaaag
gatttagcggcccagctagaaacaaagcgggatgactttcataagcagaatctgaaagca
tcttcagatcgttgctcagctttacttcaggacattttcagccctctagaagaagatgtg
aagcagggagtttattctaaaccagggggctatcgtctctttattcacaagatacaagag
ctgaagaaaaagtactatgaggaacccaggaaggggatgcaggctgaagagattctgcag
acatacttgaagtccaaggaggatgtgactgatgcaattctacaaacagatcagactctc
accgaaaaggaaaaggagatcgaagtggagcgtgtgaaagctgaatctgcagaggctgca
gcaaaaatgttggaagaaatgcaaaagaagaatgagcagctgatggaacagaaagagagg
agttatcaggaacacgtgaaacagttgactgagaagatggagcaggacagggcccagatg
cagcaagaacaagagaagatcattgctattaaacttcaggaacaagcacggttactaaag
gaaggattccaagaagagagcaaacgacttcataaagagatacaggagctccagaagagt
atgaaaaaacccaagaaaaaatgtgtcataagctaa
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