KEGG   Sciurus carolinensis (gray squirrel): 124979979
Entry
124979979         CDS       T08117                                 
Name
(RefSeq) histone-binding protein RBBP4 isoform X1
  KO
K10752  histone-binding protein RBBP4
Organism
ncar  Sciurus carolinensis (gray squirrel)
Pathway
ncar03082  ATP-dependent chromatin remodeling
ncar03083  Polycomb repressive complex
ncar04218  Cellular senescence
Brite
KEGG Orthology (KO) [BR:ncar00001]
 09120 Genetic Information Processing
  09126 Chromosome
   03082 ATP-dependent chromatin remodeling
    124979979
   03083 Polycomb repressive complex
    124979979
 09140 Cellular Processes
  09143 Cell growth and death
   04218 Cellular senescence
    124979979
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:ncar03036]
    124979979
Chromosome and associated proteins [BR:ncar03036]
 Eukaryotic type
  Nucleosome assembly factors
   Histone chaperones
    CAF-1
     124979979
  Histone modification proteins
   HAT complexes
    HATB complex
     124979979
   HDAC complexes
    Sin3A-HDAC complex
     124979979
   Polycomb repressive complex (PRC) and associated proteins
    PRC2.1
     124979979
    PRC2.2
     124979979
  Centromeric chromatin formation proteins
   Kinetochore proteins
    MIS16-MIS18 complex
     124979979
  Heterochromatin formation proteins
   Other heterochromatin formation proteins
    124979979
  Chromatin remodeling factors
   NuRD complex
    124979979
   NuRF complex
    124979979
   NuRF complex (fruit fly)
    124979979
SSDB
Motif
Pfam: WD40 CAF1C_H4-bd WD40_CDC20-Fz WD40_Prp19 Beta-prop_CAF1B_HIR1 Beta-prop_RIG_2nd Beta-prop_EIPR1 Beta-prop_TEP1_2nd WDR55 Beta-prop_EML_2 WD40_WDHD1_1st Beta-prop_WDR75_1st Beta-prop_EML EIF3I WD40_MABP1-WDR62_2nd WD_LRWD1 Beta-prop_WDR90_POC16_2nd Beta-prop_WDR19_1st WD40_RFWD3 ANAPC4_WD40 Beta-prop_DCAF12 WD40_MABP1-WDR62_1st Beta-prop_RIG_1st eIF2A MIOS_WD40 Beta-prop_SPT8 NBCH_WD40 Beta-prop_IFT140_1st Beta-prop_IFT122_1st Beta-prop_DCAF4
Other DBs
NCBI-GeneID: 124979979
NCBI-ProteinID: XP_047400974
LinkDB
Position
1:complement(185797627..185816976)
AA seq 425 aa
MADKEAAFDDAVEERVINEEYKIWKKNTPFLYDLVMTHALEWPSLTAQWLPDVTRPEGKD
FSIHRLVLGTHTSDEQNHLVIASVQLPNDDAQFDASHYDSEKGEFGGFGSVSGKIEIEIK
INHEGEVNRARYMPQNPCIIATKTPSSDVLVFDYTKHPSKPDPSGECNPDLRLRGHQKEG
YGLSWNPNLSGHLLSASDDHTICLWDISAVPKEGKVVDAKTIFTGHTAVVEDVSWHLLHE
SLFGSVADDQKLMIWDTRSNNTSKPSHSVDAHTAEVNCLSFNPYSEFILATGSADKTVAL
WDLRNLKLKLHSFESHKDEIFQVQWSPHNETILASSGTDRRLNVWDLSKIGEEQSPEDAE
DGPPELLFIHGGHTAKISDFSWNPNEPWVICSVSEDNIMQVWQMAENIYNDEDPEGSVDP
EGQGS
NT seq 1278 nt   +upstreamnt  +downstreamnt
atggccgacaaggaagcagcctttgacgacgcagtggaagaacgtgtgatcaacgaggag
tacaaaatatggaaaaagaacaccccttttctttatgatttggtgatgacccatgctctg
gagtggcctagcctaacagcacagtggcttccagatgtaaccagaccagaaggaaaagat
ttcagcattcatcgacttgtcctggggacacacacatcagatgaacaaaaccaccttgtg
atagccagtgtacagctccctaatgatgatgctcagtttgatgcatcacactacgacagt
gagaaaggagaatttggaggttttggctcagttagtgggaaaattgaaatagaaatcaag
atcaaccatgaaggagaagtaaacagggctcgttatatgccccagaacccttgcatcatt
gcaacaaagactccatccagtgatgttcttgtttttgactatacaaagcatccttctaaa
ccagacccttctggggagtgcaacccagacttgcgtctccgtggacatcagaaggaaggg
tatgggctttcttggaacccaaatctcagtgggcacttacttagtgcttcagatgaccat
accatctgcctatgggatatcagtgccgtcccaaaggaaggaaaagtggtcgatgcgaag
accatctttacagggcatacagcagtagtagaagatgtttcctggcatctgctccatgag
tccctgtttggatcagttgctgatgatcagaaacttatgatttgggatactcgttcaaac
aatacttccaaaccaagccactcagtagatgctcacactgctgaagtgaactgcctctct
ttcaatccttatagtgagtttatacttgccacaggatcagctgacaagactgttgccttg
tgggatctgagaaatctgaaacttaagttgcattcctttgaatcacataaggatgaaata
ttccaggttcagtggtcacctcacaatgagactattttggcttctagtggtactgatcgc
agactgaatgtctgggatttaagtaaaattggagaagaacaatccccagaagatgcagaa
gatggcccaccagagttattgtttattcatggtggtcacactgccaagatatctgatttc
tcctggaatcccaatgaaccttgggtgatttgttctgtatcagaagacaatatcatgcaa
gtgtggcagatggcagagaacatctataatgatgaagatcctgaaggaagtgtggatcct
gaaggacaaggatcctag

DBGET integrated database retrieval system